RNA–Protein interactions for RNA: ENST00000543957.5

ITM2C-209, Transcript of integral membrane protein 2C, humanhuman

TSL 5

Gene ITM2C, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-209ENST00000543957 CEBPAP49715 358 aaPredicted RBP20.81■□□□□ 0.92
ITM2C-209ENST00000543957 PREX1Q8TCU6 1659 aa20.8■□□□□ 0.92
ITM2C-209ENST00000543957 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.78■□□□□ 0.92
ITM2C-209ENST00000543957 HECW1Q76N89 1606 aa20.78■□□□□ 0.92
ITM2C-209ENST00000543957 ARHGEF12Q9NZN5 1544 aa20.78■□□□□ 0.92
ITM2C-209ENST00000543957 STRCQ7RTU9 1775 aa20.77■□□□□ 0.91
ITM2C-209ENST00000543957 UHRF1BP1Q6BDS2 1440 aa20.74■□□□□ 0.91
ITM2C-209ENST00000543957 SCAPERQ9BY12 1400 aa20.74■□□□□ 0.91
ITM2C-209ENST00000543957 ATP10AO60312 1499 aa20.74■□□□□ 0.91
ITM2C-209ENST00000543957 C9orf84Q5VXU9 1444 aa20.72■□□□□ 0.91
ITM2C-209ENST00000543957 RANGAP1P46060 587 aaPredicted RBP20.72■□□□□ 0.91
ITM2C-209ENST00000543957 PTPRTO14522 1441 aa20.7■□□□□ 0.9
ITM2C-209ENST00000543957 SETD1BQ9UPS6 1966 aaKnown RBP20.68■□□□□ 0.9
ITM2C-209ENST00000543957 PLCH2O75038 1416 aa20.68■□□□□ 0.9
ITM2C-209ENST00000543957 CSRNP3Q8WYN3 585 aa20.65■□□□□ 0.9
ITM2C-209ENST00000543957 LTBP4Q8N2S1 1624 aa20.64■□□□□ 0.9
ITM2C-209ENST00000543957 IQSEC2Q5JU85 1478 aa20.63■□□□□ 0.89
ITM2C-209ENST00000543957 EFCAB2Q5VUJ9 269 aa20.63■□□□□ 0.89
ITM2C-209ENST00000543957 AFAP1Q8N556 730 aa20.57■□□□□ 0.88
ITM2C-209ENST00000543957 MYT1LQ9UL68 1186 aa20.57■□□□□ 0.88
ITM2C-209ENST00000543957 CDK13Q14004 1512 aaKnown RBP20.57■□□□□ 0.88
ITM2C-209ENST00000543957 ZNF518AQ6AHZ1 1483 aa20.56■□□□□ 0.88
ITM2C-209ENST00000543957 TRAPPC8Q9Y2L5 1435 aa20.55■□□□□ 0.88
ITM2C-209ENST00000543957 ESF1Q9H501 851 aaKnown RBP20.55■□□□□ 0.88
ITM2C-209ENST00000543957 NCOA1Q15788 1441 aa20.54■□□□□ 0.88
ITM2C-209ENST00000543957 C3P01024 1663 aa20.53■□□□□ 0.88
ITM2C-209ENST00000543957 UBAP1LF5GYI3 381 aa20.52■□□□□ 0.88
ITM2C-209ENST00000543957 KDM5CP41229 1560 aa20.51■□□□□ 0.87
ITM2C-209ENST00000543957 MYO5CQ9NQX4 1742 aa20.5■□□□□ 0.87
ITM2C-209ENST00000543957 REREQ9P2R6 1566 aa20.49■□□□□ 0.87
ITM2C-209ENST00000543957 DIP2CQ9Y2E4 1556 aa20.49■□□□□ 0.87
ITM2C-209ENST00000543957 ATP1B4Q9UN42 357 aaPredicted RBP20.48■□□□□ 0.87
ITM2C-209ENST00000543957 CDK11AQ9UQ88 783 aaPredicted RBP20.47■□□□□ 0.87
ITM2C-209ENST00000543957 ZNF335Q9H4Z2 1342 aaPredicted RBP20.47■□□□□ 0.87
ITM2C-209ENST00000543957 ARHGAP5Q13017 1502 aa20.46■□□□□ 0.87
ITM2C-209ENST00000543957 AGLP35573 1532 aa20.45■□□□□ 0.86
ITM2C-209ENST00000543957 MLH3Q9UHC1 1453 aa20.44■□□□□ 0.86
ITM2C-209ENST00000543957 CAMSAP1Q5T5Y3 1602 aa20.44■□□□□ 0.86
ITM2C-209ENST00000543957 CNTLNQ9NXG0 1405 aa20.44■□□□□ 0.86
ITM2C-209ENST00000543957 NCKAP5LQ9HCH0 1330 aa20.43■□□□□ 0.86
ITM2C-209ENST00000543957 ABCA6Q8N139 1617 aa20.42■□□□□ 0.86
ITM2C-209ENST00000543957 KIF14Q15058 1648 aa20.42■□□□□ 0.86
ITM2C-209ENST00000543957 NPATQ14207 1427 aa20.39■□□□□ 0.85
ITM2C-209ENST00000543957 TROQ12816 1431 aaPredicted RBP20.38■□□□□ 0.85
ITM2C-209ENST00000543957 EEA1Q15075 1411 aa20.38■□□□□ 0.85
ITM2C-209ENST00000543957 PKD2Q13563 968 aa20.37■□□□□ 0.85
ITM2C-209ENST00000543957 FMN1Q68DA7 1419 aa20.36■□□□□ 0.85
ITM2C-209ENST00000543957 ZMYM3Q14202 1370 aa20.35■□□□□ 0.85
ITM2C-209ENST00000543957 HSPA1LP34931 641 aa20.35■□□□□ 0.85
ITM2C-209ENST00000543957 CLIP1P30622 1438 aa20.35■□□□□ 0.85
ITM2C-209ENST00000543957 MED1Q15648 1581 aaPredicted RBP20.33■□□□□ 0.84
ITM2C-209ENST00000543957 SCAF1Q9H7N4 1312 aaKnown RBP20.32■□□□□ 0.84
ITM2C-209ENST00000543957 PLA2R1Q13018 1463 aa20.31■□□□□ 0.84
ITM2C-209ENST00000543957 CDC42BPBQ9Y5S2 1711 aa20.3■□□□□ 0.84
ITM2C-209ENST00000543957 MROH2AA6NES4 1674 aa20.3■□□□□ 0.84
ITM2C-209ENST00000543957 PIP4K2BP78356 416 aa20.3■□□□□ 0.84
ITM2C-209ENST00000543957 ABCC1P33527 1531 aa20.3■□□□□ 0.84
ITM2C-209ENST00000543957 KIDINS220Q9ULH0 1771 aa20.29■□□□□ 0.84
ITM2C-209ENST00000543957 PPP6R1Q9UPN7 881 aa20.29■□□□□ 0.84
ITM2C-209ENST00000543957 TCOF1Q13428 1488 aaKnown RBP20.29■□□□□ 0.84
ITM2C-209ENST00000543957 TOM1O60784 492 aa20.27■□□□□ 0.84
ITM2C-209ENST00000543957 ITSN2Q9NZM3 1697 aa20.26■□□□□ 0.83
ITM2C-209ENST00000543957 PHF23Q9BUL5 403 aaPredicted RBP20.25■□□□□ 0.83
ITM2C-209ENST00000543957 PREX2Q70Z35 1606 aa20.24■□□□□ 0.83
ITM2C-209ENST00000543957 ZNF142P52746 1687 aaPredicted RBP20.24■□□□□ 0.83
ITM2C-209ENST00000543957 CEP170BQ9Y4F5 1589 aaPredicted RBP20.24■□□□□ 0.83
ITM2C-209ENST00000543957 MYO3AQ8NEV4 1616 aa20.24■□□□□ 0.83
ITM2C-209ENST00000543957 ARHGAP35Q9NRY4 1499 aa20.23■□□□□ 0.83
ITM2C-209ENST00000543957 PTPRKQ15262 1439 aa20.22■□□□□ 0.83
ITM2C-209ENST00000543957 UBTFP17480 764 aaKnown RBP20.22■□□□□ 0.83
ITM2C-209ENST00000543957 SUPT6HQ7KZ85 1726 aaKnown RBP20.21■□□□□ 0.83
ITM2C-209ENST00000543957 SPAG9O60271 1321 aaKnown RBP20.2■□□□□ 0.82
ITM2C-209ENST00000543957 SAMD9LQ8IVG5 1584 aa20.2■□□□□ 0.82
ITM2C-209ENST00000543957 CLTCQ00610 1675 aaKnown RBP20.19■□□□□ 0.82
ITM2C-209ENST00000543957 EHMT2Q96KQ7 1210 aa20.19■□□□□ 0.82
ITM2C-209ENST00000543957 ZNF777Q9ULD5 760 aaPredicted RBP20.18■□□□□ 0.82
ITM2C-209ENST00000543957 GGT6Q6P531 493 aa20.17■□□□□ 0.82
ITM2C-209ENST00000543957 CPS1P31327 1500 aa20.17■□□□□ 0.82
ITM2C-209ENST00000543957 LRRIQ1Q96JM4 1722 aa20.16■□□□□ 0.82
ITM2C-209ENST00000543957 A2ML1A8K2U0 1454 aa20.14■□□□□ 0.81
ITM2C-209ENST00000543957 SHANK2Q9UPX8 1470 aa20.14■□□□□ 0.81
ITM2C-209ENST00000543957 HNRNPMP52272 730 aaKnown RBP eCLIP20.14■□□□□ 0.81
ITM2C-209ENST00000543957 A2MP01023 1474 aa20.12■□□□□ 0.81
ITM2C-209ENST00000543957 CDC42BPAQ5VT25 1732 aa20.12■□□□□ 0.81
ITM2C-209ENST00000543957 SYCP2Q9BX26 1530 aa20.12■□□□□ 0.81
ITM2C-209ENST00000543957 DNMT1P26358 1616 aaKnown RBP20.11■□□□□ 0.81
ITM2C-209ENST00000543957 PLXNC1O60486 1568 aa20.11■□□□□ 0.81
ITM2C-209ENST00000543957 ATP7AQ04656 1500 aa20.11■□□□□ 0.81
ITM2C-209ENST00000543957 CCDC18Q5T9S5 1454 aa20.09■□□□□ 0.81
ITM2C-209ENST00000543957 NEURL4Q96JN8 1562 aa20.07■□□□□ 0.8
ITM2C-209ENST00000543957 KIAA1107Q9UPP5 1409 aa20.06■□□□□ 0.8
ITM2C-209ENST00000543957 GPATCH8Q9UKJ3 1502 aaKnown RBP20.06■□□□□ 0.8
ITM2C-209ENST00000543957 CASKIN1Q8WXD9 1431 aa20.05■□□□□ 0.8
ITM2C-209ENST00000543957 ANKLE2Q86XL3 938 aa20.05■□□□□ 0.8
ITM2C-209ENST00000543957 SENP3Q9H4L4 574 aaPredicted RBP20.05■□□□□ 0.8
ITM2C-209ENST00000543957 ALKQ9UM73 1620 aa20.05■□□□□ 0.8
ITM2C-209ENST00000543957 POLR1AO95602 1720 aaPredicted RBP20.05■□□□□ 0.8
ITM2C-209ENST00000543957 INO80Q9ULG1 1556 aaPredicted RBP20.04■□□□□ 0.8
ITM2C-209ENST00000543957 FBXO31Q5XUX0 539 aaPredicted RBP20.03■□□□□ 0.8
ITM2C-209ENST00000543957 TNRQ92752 1358 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms