RNA–Protein interactions for RNA: ENST00000543891.5

TMEM183A-205, Transcript of transmembrane protein 183A, human

TSL 3

Gene TMEM183A, Length 924 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM183A-205	ENST00000543891	SCAPER	Q9BY12	1400 aa		33.85	■■■■□ 3.01
TMEM183A-205	ENST00000543891	PREX2	Q70Z35	1606 aa		33.84	■■■■□ 3.01
TMEM183A-205	ENST00000543891	EFCAB2	Q5VUJ9	269 aa		33.84	■■■■□ 3.01
TMEM183A-205	ENST00000543891	ADAMTSL3	P82987	1691 aa		33.84	■■■■□ 3.01
TMEM183A-205	ENST00000543891	CDC42BPA	Q5VT25	1732 aa		33.81	■■■■□ 3
TMEM183A-205	ENST00000543891	POGZ	Q7Z3K3	1410 aa		33.8	■■■■□ 3
TMEM183A-205	ENST00000543891	ZMYM4	Q5VZL5	1548 aa		33.8	■■■■□ 3
TMEM183A-205	ENST00000543891	ARHGEF40	Q8TER5	1519 aa		33.77	■■■■□ 3
TMEM183A-205	ENST00000543891	BCORL1	Q5H9F3	1711 aa		33.76	■■■■□ 3
TMEM183A-205	ENST00000543891	VPS8	Q8N3P4	1428 aa		33.76	■■■□□ 2.99
TMEM183A-205	ENST00000543891	YEATS2	Q9ULM3	1422 aa		33.74	■■■□□ 2.99
TMEM183A-205	ENST00000543891	MTUS2	Q5JR59	1369 aa		33.73	■■■□□ 2.99
TMEM183A-205	ENST00000543891	PTPRM	P28827	1452 aa		33.73	■■■□□ 2.99
TMEM183A-205	ENST00000543891	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.73	■■■□□ 2.99
TMEM183A-205	ENST00000543891	ARHGEF12	Q9NZN5	1544 aa		33.71	■■■□□ 2.99
TMEM183A-205	ENST00000543891	EHBP1L1	Q8N3D4	1523 aa		33.7	■■■□□ 2.99
TMEM183A-205	ENST00000543891	ABCC1	P33527	1531 aa		33.69	■■■□□ 2.98
TMEM183A-205	ENST00000543891	ZFYVE16	Q7Z3T8	1539 aa		33.69	■■■□□ 2.98
TMEM183A-205	ENST00000543891	SIGLEC1	Q9BZZ2	1709 aa		33.68	■■■□□ 2.98
TMEM183A-205	ENST00000543891	ILDR1	Q86SU0	546 aa	Predicted RBP	33.67	■■■□□ 2.98
TMEM183A-205	ENST00000543891	TIAM1	Q13009	1591 aa		33.67	■■■□□ 2.98
TMEM183A-205	ENST00000543891	MADD	Q8WXG6	1647 aa		33.67	■■■□□ 2.98
TMEM183A-205	ENST00000543891	MAGI2	Q86UL8	1455 aa		33.65	■■■□□ 2.98
TMEM183A-205	ENST00000543891	AFAP1	Q8N556	730 aa		33.65	■■■□□ 2.98
TMEM183A-205	ENST00000543891	KDM5C	P41229	1560 aa		33.64	■■■□□ 2.98
TMEM183A-205	ENST00000543891	SAMD9L	Q8IVG5	1584 aa		33.64	■■■□□ 2.98
TMEM183A-205	ENST00000543891	ITSN2	Q9NZM3	1697 aa		33.64	■■■□□ 2.98
TMEM183A-205	ENST00000543891	TRAPPC8	Q9Y2L5	1435 aa		33.63	■■■□□ 2.97
TMEM183A-205	ENST00000543891	ARID4B	Q4LE39	1312 aa	Predicted RBP	33.63	■■■□□ 2.97
TMEM183A-205	ENST00000543891	ZNF518A	Q6AHZ1	1483 aa		33.63	■■■□□ 2.97
TMEM183A-205	ENST00000543891	CCNB3	Q8WWL7	1395 aa		33.6	■■■□□ 2.97
TMEM183A-205	ENST00000543891	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.57	■■■□□ 2.96
TMEM183A-205	ENST00000543891	RIMS1	Q86UR5	1692 aa	Known RBP	33.55	■■■□□ 2.96
TMEM183A-205	ENST00000543891	SYCP2	Q9BX26	1530 aa		33.53	■■■□□ 2.96
TMEM183A-205	ENST00000543891	NCOA2	Q15596	1464 aa		33.53	■■■□□ 2.96
TMEM183A-205	ENST00000543891	CFDP1	Q9UEE9	299 aa	Predicted RBP	33.52	■■■□□ 2.96
TMEM183A-205	ENST00000543891	LRRC9	Q6ZRR7	1453 aa		33.51	■■■□□ 2.96
TMEM183A-205	ENST00000543891	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.5	■■■□□ 2.95
TMEM183A-205	ENST00000543891	ATP10A	O60312	1499 aa		33.5	■■■□□ 2.95
TMEM183A-205	ENST00000543891	MLH3	Q9UHC1	1453 aa		33.5	■■■□□ 2.95
TMEM183A-205	ENST00000543891	KANK4	Q5T7N3	995 aa	Predicted RBP	33.49	■■■□□ 2.95
TMEM183A-205	ENST00000543891	DIP2C	Q9Y2E4	1556 aa		33.49	■■■□□ 2.95
TMEM183A-205	ENST00000543891	MAP3K1	Q13233	1512 aa		33.48	■■■□□ 2.95
TMEM183A-205	ENST00000543891	HNRNPM	P52272	730 aa	Known RBP eCLIP	33.48	■■■□□ 2.95
TMEM183A-205	ENST00000543891	ABCA6	Q8N139	1617 aa		33.48	■■■□□ 2.95
TMEM183A-205	ENST00000543891	ZNF644	Q9H582	1327 aa	Predicted RBP	33.48	■■■□□ 2.95
TMEM183A-205	ENST00000543891	C9orf84	Q5VXU9	1444 aa		33.46	■■■□□ 2.95
TMEM183A-205	ENST00000543891	KIAA1107	Q9UPP5	1409 aa		33.45	■■■□□ 2.94
TMEM183A-205	ENST00000543891	KIDINS220	Q9ULH0	1771 aa		33.44	■■■□□ 2.94
TMEM183A-205	ENST00000543891	LMTK3	Q96Q04	1460 aa		33.43	■■■□□ 2.94
TMEM183A-205	ENST00000543891	PLEKHH2	Q8IVE3	1493 aa		33.4	■■■□□ 2.94
TMEM183A-205	ENST00000543891	MYT1L	Q9UL68	1186 aa		33.39	■■■□□ 2.94
TMEM183A-205	ENST00000543891	MBD5	Q9P267	1494 aa		33.37	■■■□□ 2.93
TMEM183A-205	ENST00000543891	FER1L4	A9Z1Z3	1794 aa		33.37	■■■□□ 2.93
TMEM183A-205	ENST00000543891	MLEC	Q14165	292 aa		33.37	■■■□□ 2.93
TMEM183A-205	ENST00000543891	RERE	Q9P2R6	1566 aa		33.36	■■■□□ 2.93
TMEM183A-205	ENST00000543891	INO80	Q9ULG1	1556 aa	Predicted RBP	33.32	■■■□□ 2.92
TMEM183A-205	ENST00000543891	CAMSAP2	Q08AD1	1489 aa		33.31	■■■□□ 2.92
TMEM183A-205	ENST00000543891	SPAG9	O60271	1321 aa	Known RBP	33.3	■■■□□ 2.92
TMEM183A-205	ENST00000543891	ATP7A	Q04656	1500 aa		33.3	■■■□□ 2.92
TMEM183A-205	ENST00000543891	AGL	P35573	1532 aa		33.25	■■■□□ 2.91
TMEM183A-205	ENST00000543891	PLPPR3	Q6T4P5	718 aa		33.21	■■■□□ 2.91
TMEM183A-205	ENST00000543891	MYOM3	Q5VTT5	1437 aa		33.2	■■■□□ 2.91
TMEM183A-205	ENST00000543891	APLP2	Q06481	763 aa		33.18	■■■□□ 2.9
TMEM183A-205	ENST00000543891	CCDC141	Q6ZP82	1450 aa		33.18	■■■□□ 2.9
TMEM183A-205	ENST00000543891	PLXNC1	O60486	1568 aa		33.17	■■■□□ 2.9
TMEM183A-205	ENST00000543891	FBXO41	Q8TF61	875 aa		33.17	■■■□□ 2.9
TMEM183A-205	ENST00000543891	ARHGEF5	Q12774	1597 aa		33.15	■■■□□ 2.9
TMEM183A-205	ENST00000543891	HSPA2	P54652	639 aa		33.14	■■■□□ 2.9
TMEM183A-205	ENST00000543891	A2M	P01023	1474 aa		33.13	■■■□□ 2.89
TMEM183A-205	ENST00000543891	RTEL1-TNFRSF6B	F6WH68	1400 aa		33.13	■■■□□ 2.89
TMEM183A-205	ENST00000543891	MIA2	Q96PC5	1412 aa		33.13	■■■□□ 2.89
TMEM183A-205	ENST00000543891	PREX1	Q8TCU6	1659 aa		33.12	■■■□□ 2.89
TMEM183A-205	ENST00000543891	ADGB	Q8N7X0	1667 aa		33.1	■■■□□ 2.89
TMEM183A-205	ENST00000543891	CEBPA	P49715	358 aa	Predicted RBP	33.07	■■■□□ 2.88
TMEM183A-205	ENST00000543891	RSPH4A	Q5TD94	716 aa		33.05	■■■□□ 2.88
TMEM183A-205	ENST00000543891	PTPN23	Q9H3S7	1636 aa		33.02	■■■□□ 2.88
TMEM183A-205	ENST00000543891	DHX29	Q7Z478	1369 aa	Known RBP	32.99	■■■□□ 2.87
TMEM183A-205	ENST00000543891	C3	P01024	1663 aa		32.99	■■■□□ 2.87
TMEM183A-205	ENST00000543891	FGD6	Q6ZV73	1430 aa		32.99	■■■□□ 2.87
TMEM183A-205	ENST00000543891	MAST1	Q9Y2H9	1570 aa		32.99	■■■□□ 2.87
TMEM183A-205	ENST00000543891	TCOF1	Q13428	1488 aa	Known RBP	32.96	■■■□□ 2.87
TMEM183A-205	ENST00000543891	TSPY4	P0CV99	314 aa		32.94	■■■□□ 2.86
TMEM183A-205	ENST00000543891	TSPY10	P0CW01	314 aa		32.94	■■■□□ 2.86
TMEM183A-205	ENST00000543891	SETD1B	Q9UPS6	1966 aa	Known RBP	32.94	■■■□□ 2.86
TMEM183A-205	ENST00000543891	UHRF1BP1	Q6BDS2	1440 aa		32.94	■■■□□ 2.86
TMEM183A-205	ENST00000543891	ABCC5	O15440	1437 aa		32.92	■■■□□ 2.86
TMEM183A-205	ENST00000543891	GGT6	Q6P531	493 aa		32.91	■■■□□ 2.86
TMEM183A-205	ENST00000543891	CNTLN	Q9NXG0	1405 aa		32.9	■■■□□ 2.86
TMEM183A-205	ENST00000543891	CLTC	Q00610	1675 aa	Known RBP	32.9	■■■□□ 2.86
TMEM183A-205	ENST00000543891	CROCC2	H7BZ55	1655 aa		32.89	■■■□□ 2.86
TMEM183A-205	ENST00000543891	MROH2A	A6NES4	1674 aa		32.88	■■■□□ 2.85
TMEM183A-205	ENST00000543891	ESF1	Q9H501	851 aa	Known RBP	32.88	■■■□□ 2.85
TMEM183A-205	ENST00000543891	DNMT1	P26358	1616 aa	Known RBP	32.87	■■■□□ 2.85
TMEM183A-205	ENST00000543891	STRC	Q7RTU9	1775 aa		32.86	■■■□□ 2.85
TMEM183A-205	ENST00000543891	DAPK1	P53355	1430 aa		32.85	■■■□□ 2.85
TMEM183A-205	ENST00000543891	KIF3B	O15066	747 aa		32.84	■■■□□ 2.85
TMEM183A-205	ENST00000543891	ZMYM3	Q14202	1370 aa		32.83	■■■□□ 2.85
TMEM183A-205	ENST00000543891	SHANK2	Q9UPX8	1470 aa		32.83	■■■□□ 2.85
TMEM183A-205	ENST00000543891	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.8	■■■□□ 2.84

Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms