RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 HECW1Q76N89 1606 aa33.17■■■□□ 2.9
LPCAT3-211ENST00000543794 MLECQ14165 292 aa33.16■■■□□ 2.9
LPCAT3-211ENST00000543794 EFCAB2Q5VUJ9 269 aa33.16■■■□□ 2.9
LPCAT3-211ENST00000543794 FMN1Q68DA7 1419 aa33.15■■■□□ 2.9
LPCAT3-211ENST00000543794 CDK11AQ9UQ88 783 aaPredicted RBP33.14■■■□□ 2.9
LPCAT3-211ENST00000543794 SIGLEC1Q9BZZ2 1709 aa33.13■■■□□ 2.89
LPCAT3-211ENST00000543794 EHMT2Q96KQ7 1210 aa33.12■■■□□ 2.89
LPCAT3-211ENST00000543794 ATP10AO60312 1499 aa33.08■■■□□ 2.89
LPCAT3-211ENST00000543794 ARHGAP35Q9NRY4 1499 aa33.08■■■□□ 2.89
LPCAT3-211ENST00000543794 C9orf84Q5VXU9 1444 aa33.02■■■□□ 2.88
LPCAT3-211ENST00000543794 TROQ12816 1431 aaPredicted RBP33■■■□□ 2.87
LPCAT3-211ENST00000543794 ARHGEF12Q9NZN5 1544 aa32.99■■■□□ 2.87
LPCAT3-211ENST00000543794 AFAP1Q8N556 730 aa32.98■■■□□ 2.87
LPCAT3-211ENST00000543794 MYO5CQ9NQX4 1742 aa32.96■■■□□ 2.87
LPCAT3-211ENST00000543794 FER1L4A9Z1Z3 1794 aa32.96■■■□□ 2.87
LPCAT3-211ENST00000543794 ZNF518AQ6AHZ1 1483 aa32.95■■■□□ 2.87
LPCAT3-211ENST00000543794 KIF14Q15058 1648 aa32.95■■■□□ 2.86
LPCAT3-211ENST00000543794 CEBPAP49715 358 aaPredicted RBP32.93■■■□□ 2.86
LPCAT3-211ENST00000543794 CHIC1Q5VXU3 224 aa32.93■■■□□ 2.86
LPCAT3-211ENST00000543794 CLIP1P30622 1438 aa32.93■■■□□ 2.86
LPCAT3-211ENST00000543794 CERKQ8TCT0 537 aa32.92■■■□□ 2.86
LPCAT3-211ENST00000543794 ARHGAP5Q13017 1502 aa32.91■■■□□ 2.86
LPCAT3-211ENST00000543794 KDM5CP41229 1560 aa32.87■■■□□ 2.85
LPCAT3-211ENST00000543794 MYT1LQ9UL68 1186 aa32.86■■■□□ 2.85
LPCAT3-211ENST00000543794 MLH3Q9UHC1 1453 aa32.8■■■□□ 2.84
LPCAT3-211ENST00000543794 DMRT2Q9Y5R5 561 aa32.78■■■□□ 2.84
LPCAT3-211ENST00000543794 PREX1Q8TCU6 1659 aa32.77■■■□□ 2.84
LPCAT3-211ENST00000543794 LRRIQ1Q96JM4 1722 aa32.77■■■□□ 2.84
LPCAT3-211ENST00000543794 REREQ9P2R6 1566 aa32.76■■■□□ 2.84
LPCAT3-211ENST00000543794 DIP2CQ9Y2E4 1556 aa32.76■■■□□ 2.84
LPCAT3-211ENST00000543794 CASKIN1Q8WXD9 1431 aa32.76■■■□□ 2.83
LPCAT3-211ENST00000543794 TRAPPC8Q9Y2L5 1435 aa32.76■■■□□ 2.83
LPCAT3-211ENST00000543794 UHRF1BP1Q6BDS2 1440 aa32.74■■■□□ 2.83
LPCAT3-211ENST00000543794 CDC42BPBQ9Y5S2 1711 aa32.74■■■□□ 2.83
LPCAT3-211ENST00000543794 CCDC18Q5T9S5 1454 aa32.72■■■□□ 2.83
LPCAT3-211ENST00000543794 SETD1BQ9UPS6 1966 aaKnown RBP32.72■■■□□ 2.83
LPCAT3-211ENST00000543794 AGLP35573 1532 aa32.7■■■□□ 2.83
LPCAT3-211ENST00000543794 ABCC1P33527 1531 aa32.68■■■□□ 2.82
LPCAT3-211ENST00000543794 ESF1Q9H501 851 aaKnown RBP32.68■■■□□ 2.82
LPCAT3-211ENST00000543794 ABCA6Q8N139 1617 aa32.68■■■□□ 2.82
LPCAT3-211ENST00000543794 PREX2Q70Z35 1606 aa32.67■■■□□ 2.82
LPCAT3-211ENST00000543794 STRCQ7RTU9 1775 aa32.64■■■□□ 2.82
LPCAT3-211ENST00000543794 ITSN2Q9NZM3 1697 aa32.58■■■□□ 2.81
LPCAT3-211ENST00000543794 PTPRTO14522 1441 aa32.58■■■□□ 2.81
LPCAT3-211ENST00000543794 C3P01024 1663 aa32.57■■■□□ 2.8
LPCAT3-211ENST00000543794 ZNF777Q9ULD5 760 aaPredicted RBP32.57■■■□□ 2.8
LPCAT3-211ENST00000543794 CNTLNQ9NXG0 1405 aa32.57■■■□□ 2.8
LPCAT3-211ENST00000543794 KIDINS220Q9ULH0 1771 aa32.57■■■□□ 2.8
LPCAT3-211ENST00000543794 FYCO1Q9BQS8 1478 aa32.55■■■□□ 2.8
LPCAT3-211ENST00000543794 CDC42BPAQ5VT25 1732 aa32.53■■■□□ 2.8
LPCAT3-211ENST00000543794 GPATCH8Q9UKJ3 1502 aaKnown RBP32.52■■■□□ 2.8
LPCAT3-211ENST00000543794 SPAG9O60271 1321 aaKnown RBP32.51■■■□□ 2.8
LPCAT3-211ENST00000543794 HNRNPMP52272 730 aaKnown RBP eCLIP32.51■■■□□ 2.79
LPCAT3-211ENST00000543794 SAMD9LQ8IVG5 1584 aa32.5■■■□□ 2.79
LPCAT3-211ENST00000543794 ZMYM3Q14202 1370 aa32.46■■■□□ 2.79
LPCAT3-211ENST00000543794 KIAA1107Q9UPP5 1409 aa32.45■■■□□ 2.79
LPCAT3-211ENST00000543794 CFDP1Q9UEE9 299 aaPredicted RBP32.45■■■□□ 2.79
LPCAT3-211ENST00000543794 NPATQ14207 1427 aa32.44■■■□□ 2.78
LPCAT3-211ENST00000543794 NCOA1Q15788 1441 aa32.44■■■□□ 2.78
LPCAT3-211ENST00000543794 SYCP2Q9BX26 1530 aa32.43■■■□□ 2.78
LPCAT3-211ENST00000543794 PLEKHH2Q8IVE3 1493 aa32.39■■■□□ 2.78
LPCAT3-211ENST00000543794 LTBP4Q8N2S1 1624 aa32.38■■■□□ 2.77
LPCAT3-211ENST00000543794 CCNB3Q8WWL7 1395 aa32.38■■■□□ 2.77
LPCAT3-211ENST00000543794 MROH2AA6NES4 1674 aa32.35■■■□□ 2.77
LPCAT3-211ENST00000543794 ATP7AQ04656 1500 aa32.35■■■□□ 2.77
LPCAT3-211ENST00000543794 DISP3Q9P2K9 1392 aa32.34■■■□□ 2.77
LPCAT3-211ENST00000543794 A2MP01023 1474 aa32.34■■■□□ 2.77
LPCAT3-211ENST00000543794 CAMSAP1Q5T5Y3 1602 aa32.32■■■□□ 2.76
LPCAT3-211ENST00000543794 MTUS2Q5JR59 1369 aa32.32■■■□□ 2.76
LPCAT3-211ENST00000543794 GGT6Q6P531 493 aa32.31■■■□□ 2.76
LPCAT3-211ENST00000543794 PPP6R1Q9UPN7 881 aa32.31■■■□□ 2.76
LPCAT3-211ENST00000543794 IQSEC2Q5JU85 1478 aa32.3■■■□□ 2.76
LPCAT3-211ENST00000543794 PLXNC1O60486 1568 aa32.3■■■□□ 2.76
LPCAT3-211ENST00000543794 SUPT6HQ7KZ85 1726 aaKnown RBP32.3■■■□□ 2.76
LPCAT3-211ENST00000543794 NCKAP5LQ9HCH0 1330 aa32.29■■■□□ 2.76
LPCAT3-211ENST00000543794 ILDR2Q71H61 639 aa32.29■■■□□ 2.76
LPCAT3-211ENST00000543794 INO80Q9ULG1 1556 aaPredicted RBP32.28■■■□□ 2.76
LPCAT3-211ENST00000543794 PTPRKQ15262 1439 aa32.26■■■□□ 2.76
LPCAT3-211ENST00000543794 ZNF644Q9H582 1327 aaPredicted RBP32.26■■■□□ 2.75
LPCAT3-211ENST00000543794 PKD2Q13563 968 aa32.25■■■□□ 2.75
LPCAT3-211ENST00000543794 CLTCQ00610 1675 aaKnown RBP32.21■■■□□ 2.75
LPCAT3-211ENST00000543794 MBD5Q9P267 1494 aa32.21■■■□□ 2.75
LPCAT3-211ENST00000543794 PLA2R1Q13018 1463 aa32.2■■■□□ 2.75
LPCAT3-211ENST00000543794 ZNF335Q9H4Z2 1342 aaPredicted RBP32.2■■■□□ 2.74
LPCAT3-211ENST00000543794 RTEL1-TNFRSF6BF6WH68 1400 aa32.17■■■□□ 2.74
LPCAT3-211ENST00000543794 TCOF1Q13428 1488 aaKnown RBP32.16■■■□□ 2.74
LPCAT3-211ENST00000543794 SOCS7O14512 581 aa32.15■■■□□ 2.74
LPCAT3-211ENST00000543794 DHX29Q7Z478 1369 aaKnown RBP32.14■■■□□ 2.74
LPCAT3-211ENST00000543794 TIAM1Q13009 1591 aa32.14■■■□□ 2.74
LPCAT3-211ENST00000543794 CEP170BQ9Y4F5 1589 aaPredicted RBP32.14■■■□□ 2.74
LPCAT3-211ENST00000543794 MYO3AQ8NEV4 1616 aa32.14■■■□□ 2.74
LPCAT3-211ENST00000543794 ZNF142P52746 1687 aaPredicted RBP32.13■■■□□ 2.73
LPCAT3-211ENST00000543794 CEP162Q5TB80 1403 aa32.13■■■□□ 2.73
LPCAT3-211ENST00000543794 ADGBQ8N7X0 1667 aa32.11■■■□□ 2.73
LPCAT3-211ENST00000543794 EHBP1L1Q8N3D4 1523 aa32.1■■■□□ 2.73
LPCAT3-211ENST00000543794 UBAP1LF5GYI3 381 aa32.09■■■□□ 2.73
LPCAT3-211ENST00000543794 A2ML1A8K2U0 1454 aa32.06■■■□□ 2.72
LPCAT3-211ENST00000543794 RSPH4AQ5TD94 716 aa32.06■■■□□ 2.72
LPCAT3-211ENST00000543794 KIF3BO15066 747 aa32.05■■■□□ 2.72
LPCAT3-211ENST00000543794 SPATA31D1Q6ZQQ2 1576 aa32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms