RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	INO80	Q9ULG1	1556 aa	Predicted RBP	11.45	□□□□□ -0.58
GTF2H3-212	ENST00000543341	PHLDB1	Q86UU1	1377 aa		11.44	□□□□□ -0.58
GTF2H3-212	ENST00000543341	PLXNC1	O60486	1568 aa		11.44	□□□□□ -0.58
GTF2H3-212	ENST00000543341	KANK4	Q5T7N3	995 aa	Predicted RBP	11.44	□□□□□ -0.58
GTF2H3-212	ENST00000543341	ZMYM4	Q5VZL5	1548 aa		11.44	□□□□□ -0.58
GTF2H3-212	ENST00000543341	SHANK2	Q9UPX8	1470 aa		11.44	□□□□□ -0.58
GTF2H3-212	ENST00000543341	P3H3	Q8IVL6	736 aa		11.43	□□□□□ -0.58
GTF2H3-212	ENST00000543341	PLCH2	O75038	1416 aa		11.43	□□□□□ -0.58
GTF2H3-212	ENST00000543341	MBD5	Q9P267	1494 aa		11.42	□□□□□ -0.58
GTF2H3-212	ENST00000543341	FGD6	Q6ZV73	1430 aa		11.42	□□□□□ -0.58
GTF2H3-212	ENST00000543341	NEO1	Q92859	1461 aa		11.41	□□□□□ -0.58
GTF2H3-212	ENST00000543341	ADGRL2	O95490	1459 aa		11.41	□□□□□ -0.58
GTF2H3-212	ENST00000543341	KIAA1107	Q9UPP5	1409 aa		11.4	□□□□□ -0.58
GTF2H3-212	ENST00000543341	RERE	Q9P2R6	1566 aa		11.4	□□□□□ -0.58
GTF2H3-212	ENST00000543341	CAMSAP2	Q08AD1	1489 aa		11.4	□□□□□ -0.59
GTF2H3-212	ENST00000543341	AKNA	Q7Z591	1439 aa		11.39	□□□□□ -0.59
GTF2H3-212	ENST00000543341	ARHGEF12	Q9NZN5	1544 aa		11.39	□□□□□ -0.59
GTF2H3-212	ENST00000543341	PELP1	Q8IZL8	1130 aa	Known RBP	11.38	□□□□□ -0.59
GTF2H3-212	ENST00000543341	DEPDC5	O75140	1603 aa		11.37	□□□□□ -0.59
GTF2H3-212	ENST00000543341	KIDINS220	Q9ULH0	1771 aa		11.36	□□□□□ -0.59
GTF2H3-212	ENST00000543341	PLEKHH2	Q8IVE3	1493 aa		11.36	□□□□□ -0.59
GTF2H3-212	ENST00000543341	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.36	□□□□□ -0.59
GTF2H3-212	ENST00000543341	ZFYVE16	Q7Z3T8	1539 aa		11.36	□□□□□ -0.59
GTF2H3-212	ENST00000543341	MTUS2	Q5JR59	1369 aa		11.35	□□□□□ -0.59
GTF2H3-212	ENST00000543341	SYCP2	Q9BX26	1530 aa		11.33	□□□□□ -0.6
GTF2H3-212	ENST00000543341	TRIM26	Q12899	539 aa	Predicted RBP	11.32	□□□□□ -0.6
GTF2H3-212	ENST00000543341	SIGLEC1	Q9BZZ2	1709 aa		11.32	□□□□□ -0.6
GTF2H3-212	ENST00000543341	RNF17	Q9BXT8	1623 aa	Known RBP	11.32	□□□□□ -0.6
GTF2H3-212	ENST00000543341	HECW2	Q9P2P5	1572 aa		11.32	□□□□□ -0.6
GTF2H3-212	ENST00000543341	MAGI2	Q86UL8	1455 aa		11.32	□□□□□ -0.6
GTF2H3-212	ENST00000543341	UNC13B	O14795	1591 aa		11.31	□□□□□ -0.6
GTF2H3-212	ENST00000543341	FANCA	O15360	1455 aa		11.31	□□□□□ -0.6
GTF2H3-212	ENST00000543341	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.31	□□□□□ -0.6
GTF2H3-212	ENST00000543341	ABCA6	Q8N139	1617 aa		11.31	□□□□□ -0.6
GTF2H3-212	ENST00000543341	TEX14	Q8IWB6	1497 aa		11.31	□□□□□ -0.6
GTF2H3-212	ENST00000543341	PTPRK	Q15262	1439 aa		11.31	□□□□□ -0.6
GTF2H3-212	ENST00000543341	ARHGAP5	Q13017	1502 aa		11.3	□□□□□ -0.6
GTF2H3-212	ENST00000543341	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.3	□□□□□ -0.6
GTF2H3-212	ENST00000543341	DAPK1	P53355	1430 aa		11.3	□□□□□ -0.6
GTF2H3-212	ENST00000543341	KDM5D	Q9BY66	1539 aa		11.3	□□□□□ -0.6
GTF2H3-212	ENST00000543341	ROCK1	Q13464	1354 aa		11.3	□□□□□ -0.6
GTF2H3-212	ENST00000543341	CCNB3	Q8WWL7	1395 aa		11.3	□□□□□ -0.6
GTF2H3-212	ENST00000543341	ABCC5	O15440	1437 aa		11.29	□□□□□ -0.6
GTF2H3-212	ENST00000543341	POGZ	Q7Z3K3	1410 aa		11.29	□□□□□ -0.6
GTF2H3-212	ENST00000543341	VWDE	Q8N2E2	1590 aa		11.29	□□□□□ -0.6
GTF2H3-212	ENST00000543341	MLH3	Q9UHC1	1453 aa		11.29	□□□□□ -0.6
GTF2H3-212	ENST00000543341	RANGAP1	P46060	587 aa	Predicted RBP	11.29	□□□□□ -0.6
GTF2H3-212	ENST00000543341	MROH1	Q8NDA8	1641 aa		11.29	□□□□□ -0.6
GTF2H3-212	ENST00000543341	CCDC141	Q6ZP82	1450 aa		11.28	□□□□□ -0.6
GTF2H3-212	ENST00000543341	PLEKHD1	A6NEE1	506 aa		11.28	□□□□□ -0.6
GTF2H3-212	ENST00000543341	TSPOAP1	O95153	1857 aa		11.28	□□□□□ -0.6
GTF2H3-212	ENST00000543341	CD109	Q6YHK3	1445 aa		11.28	□□□□□ -0.6
GTF2H3-212	ENST00000543341	DIP2C	Q9Y2E4	1556 aa		11.28	□□□□□ -0.6
GTF2H3-212	ENST00000543341	ARHGEF40	Q8TER5	1519 aa		11.28	□□□□□ -0.6
GTF2H3-212	ENST00000543341	CYB5RL	Q6IPT4	315 aa		11.27	□□□□□ -0.61
GTF2H3-212	ENST00000543341	FAM135A	Q9P2D6	1515 aa		11.26	□□□□□ -0.61
GTF2H3-212	ENST00000543341	ATP7A	Q04656	1500 aa		11.26	□□□□□ -0.61
GTF2H3-212	ENST00000543341	KDM6B	O15054	1643 aa		11.26	□□□□□ -0.61
GTF2H3-212	ENST00000543341	ZNF518A	Q6AHZ1	1483 aa		11.25	□□□□□ -0.61
GTF2H3-212	ENST00000543341	HFM1	A2PYH4	1435 aa		11.24	□□□□□ -0.61
GTF2H3-212	ENST00000543341	ZC3H13	Q5T200	1668 aa	Known RBP	11.23	□□□□□ -0.61
GTF2H3-212	ENST00000543341	IQGAP3	Q86VI3	1631 aa		11.23	□□□□□ -0.61
GTF2H3-212	ENST00000543341	ADGRL1	O94910	1474 aa		11.23	□□□□□ -0.61
GTF2H3-212	ENST00000543341	SLC24A1	O60721	1099 aa		11.23	□□□□□ -0.61
GTF2H3-212	ENST00000543341	AGL	P35573	1532 aa		11.23	□□□□□ -0.61
GTF2H3-212	ENST00000543341	PRDM15	P57071	1507 aa	Predicted RBP	11.23	□□□□□ -0.61
GTF2H3-212	ENST00000543341	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.22	□□□□□ -0.61
GTF2H3-212	ENST00000543341	TRAPPC8	Q9Y2L5	1435 aa		11.22	□□□□□ -0.61
GTF2H3-212	ENST00000543341	DUOX2	Q9NRD8	1548 aa		11.21	□□□□□ -0.61
GTF2H3-212	ENST00000543341	NCOA1	Q15788	1441 aa		11.2	□□□□□ -0.62
GTF2H3-212	ENST00000543341	NAIP	Q13075	1403 aa		11.2	□□□□□ -0.62
GTF2H3-212	ENST00000543341	ZEB1	P37275	1124 aa	Predicted RBP	11.19	□□□□□ -0.62
GTF2H3-212	ENST00000543341	LMTK2	Q8IWU2	1503 aa		11.19	□□□□□ -0.62
GTF2H3-212	ENST00000543341	ERBIN	Q96RT1	1412 aa		11.19	□□□□□ -0.62
GTF2H3-212	ENST00000543341	MROH2A	A6NES4	1674 aa		11.19	□□□□□ -0.62
GTF2H3-212	ENST00000543341	PHF23	Q9BUL5	403 aa	Predicted RBP	11.18	□□□□□ -0.62
GTF2H3-212	ENST00000543341	C9orf84	Q5VXU9	1444 aa		11.18	□□□□□ -0.62
GTF2H3-212	ENST00000543341	DENND4B	O75064	1496 aa	Predicted RBP	11.18	□□□□□ -0.62
GTF2H3-212	ENST00000543341	RSPH4A	Q5TD94	716 aa		11.17	□□□□□ -0.62
GTF2H3-212	ENST00000543341	NPM1	P06748	294 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
GTF2H3-212	ENST00000543341	APLP2	Q06481	763 aa		11.15	□□□□□ -0.62
GTF2H3-212	ENST00000543341	NEURL4	Q96JN8	1562 aa		11.14	□□□□□ -0.63
GTF2H3-212	ENST00000543341	ZNF644	Q9H582	1327 aa	Predicted RBP	11.14	□□□□□ -0.63
GTF2H3-212	ENST00000543341	SCAPER	Q9BY12	1400 aa		11.14	□□□□□ -0.63
GTF2H3-212	ENST00000543341	TET3	O43151	1660 aa		11.14	□□□□□ -0.63
GTF2H3-212	ENST00000543341	EFCAB2	Q5VUJ9	269 aa		11.12	□□□□□ -0.63
GTF2H3-212	ENST00000543341	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.11	□□□□□ -0.63
GTF2H3-212	ENST00000543341	ADAMTSL3	P82987	1691 aa		11.11	□□□□□ -0.63
GTF2H3-212	ENST00000543341		E9PCH4	1651 aa		11.11	□□□□□ -0.63
GTF2H3-212	ENST00000543341	PIK3C2B	O00750	1634 aa		11.11	□□□□□ -0.63
GTF2H3-212	ENST00000543341	CAMSAP1	Q5T5Y3	1602 aa		11.11	□□□□□ -0.63
GTF2H3-212	ENST00000543341	ARID3C	A6NKF2	412 aa		11.11	□□□□□ -0.63
GTF2H3-212	ENST00000543341	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.1	□□□□□ -0.63
GTF2H3-212	ENST00000543341	KDM5A	P29375	1690 aa	Known RBP	11.1	□□□□□ -0.63
GTF2H3-212	ENST00000543341	CEP152	O94986	1710 aa		11.1	□□□□□ -0.63
GTF2H3-212	ENST00000543341	PZP	P20742	1482 aa		11.09	□□□□□ -0.63
GTF2H3-212	ENST00000543341	ATP10A	O60312	1499 aa		11.08	□□□□□ -0.64
GTF2H3-212	ENST00000543341	FAM69C	Q0P6D2	419 aa		11.08	□□□□□ -0.64
GTF2H3-212	ENST00000543341	SETD5	Q9C0A6	1442 aa		11.08	□□□□□ -0.64
GTF2H3-212	ENST00000543341	A2M	P01023	1474 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms