RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 TMEM106CQ9BVX2 250 aa10.87□□□□□ -0.67
MDM2-230ENST00000543323 PPP1R15BQ5SWA1 713 aa10.86□□□□□ -0.67
MDM2-230ENST00000543323 MKRN3Q13064 507 aaKnown RBP10.85□□□□□ -0.67
MDM2-230ENST00000543323 MS4A3Q96HJ5 214 aa10.83□□□□□ -0.68
MDM2-230ENST00000543323 KDM4CQ9H3R0 1056 aa10.83□□□□□ -0.68
MDM2-230ENST00000543323 GPHNQ9NQX3 736 aaPredicted RBP10.83□□□□□ -0.68
MDM2-230ENST00000543323 IL27Q8NEV9 243 aa10.82□□□□□ -0.68
MDM2-230ENST00000543323 SPDYE16A6NNV3 312 aaPredicted RBP10.81□□□□□ -0.68
MDM2-230ENST00000543323 TRIM66O15016 1216 aa10.81□□□□□ -0.68
MDM2-230ENST00000543323 PDE4DQ08499 809 aa10.8□□□□□ -0.68
MDM2-230ENST00000543323 DPYSL4O14531 572 aa10.79□□□□□ -0.68
MDM2-230ENST00000543323 PDIA6Q15084 440 aa10.79□□□□□ -0.68
MDM2-230ENST00000543323 TRPC6Q9Y210 931 aa10.79□□□□□ -0.68
MDM2-230ENST00000543323 ILDR1Q86SU0 546 aaPredicted RBP10.78□□□□□ -0.68
MDM2-230ENST00000543323 EMILIN3Q9NT22 766 aa10.78□□□□□ -0.68
MDM2-230ENST00000543323 ZMYND15Q9H091 742 aa10.76□□□□□ -0.69
MDM2-230ENST00000543323 TIE1P35590 1138 aa10.75□□□□□ -0.69
MDM2-230ENST00000543323 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.74□□□□□ -0.696e-12■■□□□ 11.5
MDM2-230ENST00000543323 GPR37O15354 613 aa10.73□□□□□ -0.69
MDM2-230ENST00000543323 DSG2Q14126 1118 aa10.73□□□□□ -0.69
MDM2-230ENST00000543323 RSPH6AQ9H0K4 717 aa10.72□□□□□ -0.69
MDM2-230ENST00000543323 TTLL13PA6NNM8 815 aa10.71□□□□□ -0.69
MDM2-230ENST00000543323 CLCN6P51797 869 aa10.7□□□□□ -0.7
MDM2-230ENST00000543323 BMP2KQ9NSY1 1161 aaPredicted RBP10.7□□□□□ -0.7
MDM2-230ENST00000543323 MINK1Q8N4C8 1332 aaPredicted RBP10.69□□□□□ -0.7
MDM2-230ENST00000543323 HAX1O00165 279 aa10.69□□□□□ -0.7
MDM2-230ENST00000543323 GALR2O43603 387 aaPredicted RBP10.69□□□□□ -0.7
MDM2-230ENST00000543323 FOXK1P85037 733 aa10.69□□□□□ -0.7
MDM2-230ENST00000543323 TMC2Q8TDI7 906 aa10.68□□□□□ -0.7
MDM2-230ENST00000543323 EVX2Q03828 476 aa10.67□□□□□ -0.7
MDM2-230ENST00000543323 FAM117AQ9C073 453 aa10.67□□□□□ -0.7
MDM2-230ENST00000543323 MICALL2Q8IY33 904 aa10.66□□□□□ -0.7
MDM2-230ENST00000543323 ZNF316A6NFI3 1004 aaPredicted RBP10.65□□□□□ -0.7
MDM2-230ENST00000543323 MAP2K5Q13163 448 aa10.65□□□□□ -0.7
MDM2-230ENST00000543323 DPY19L2Q6NUT2 758 aa10.64□□□□□ -0.71
MDM2-230ENST00000543323 CCDC102AQ96A19 550 aa10.64□□□□□ -0.71
MDM2-230ENST00000543323 DDRGK1Q96HY6 314 aa10.64□□□□□ -0.71
MDM2-230ENST00000543323 UBTFP17480 764 aaKnown RBP10.63□□□□□ -0.71
MDM2-230ENST00000543323 PLPP6Q8IY26 295 aa10.63□□□□□ -0.71
MDM2-230ENST00000543323 PLEKHG3A1L390 1219 aa10.62□□□□□ -0.71
MDM2-230ENST00000543323 NUTM2FA1L443 756 aa10.62□□□□□ -0.71
MDM2-230ENST00000543323 GRXCR2A6NFK2 248 aa10.62□□□□□ -0.71
MDM2-230ENST00000543323 AMHR2Q16671 573 aa10.62□□□□□ -0.71
MDM2-230ENST00000543323 TRIM35Q9UPQ4 493 aa10.62□□□□□ -0.71
MDM2-230ENST00000543323 IRF6O14896 467 aa10.61□□□□□ -0.71
MDM2-230ENST00000543323 GNPATO15228 680 aa10.59□□□□□ -0.71
MDM2-230ENST00000543323 MAP3K9P80192 1104 aa10.59□□□□□ -0.71
MDM2-230ENST00000543323 PARP9Q8IXQ6 854 aa10.59□□□□□ -0.71
MDM2-230ENST00000543323 C2orf72A6NCS6 295 aa10.57□□□□□ -0.72
MDM2-230ENST00000543323 KIF3CO14782 793 aa10.57□□□□□ -0.72
MDM2-230ENST00000543323 OSBPP22059 807 aa10.57□□□□□ -0.72
MDM2-230ENST00000543323 HIC1Q14526 733 aa10.57□□□□□ -0.72
MDM2-230ENST00000543323 FCHSD2O94868 740 aa10.56□□□□□ -0.72
MDM2-230ENST00000543323 ASTLQ6HA08 431 aaPredicted RBP10.56□□□□□ -0.72
MDM2-230ENST00000543323 PDCD7Q8N8D1 485 aaKnown RBP10.56□□□□□ -0.72
MDM2-230ENST00000543323 ATMINO43313 823 aaPredicted RBP10.55□□□□□ -0.72
MDM2-230ENST00000543323 ATN1P54259 1190 aaPredicted RBP10.55□□□□□ -0.72
MDM2-230ENST00000543323 FLIIQ13045 1269 aa10.55□□□□□ -0.72
MDM2-230ENST00000543323 TMEM121BQ9BXQ6 578 aaPredicted RBP10.55□□□□□ -0.72
MDM2-230ENST00000543323 PODXL2Q9NZ53 605 aa10.55□□□□□ -0.72
MDM2-230ENST00000543323 PTGER2P43116 358 aa10.54□□□□□ -0.72
MDM2-230ENST00000543323 GOPCQ9HD26 462 aa10.54□□□□□ -0.72
MDM2-230ENST00000543323 IER5LQ5T953 404 aa10.53□□□□□ -0.72
MDM2-230ENST00000543323 C1orf115Q9H7X2 142 aa10.52□□□□□ -0.73
MDM2-230ENST00000543323 BOLA1Q9Y3E2 137 aa10.52□□□□□ -0.73
MDM2-230ENST00000543323 FECHP22830 423 aa10.51□□□□□ -0.73
MDM2-230ENST00000543323 IRX5P78411 483 aaPredicted RBP10.51□□□□□ -0.73
MDM2-230ENST00000543323 G3V3G9 751 aa10.5□□□□□ -0.73
MDM2-230ENST00000543323 TTLL12Q14166 644 aaPredicted RBP10.5□□□□□ -0.73
MDM2-230ENST00000543323 UPF1Q92900 1129 aaKnown RBP eCLIP10.5□□□□□ -0.73
MDM2-230ENST00000543323 ARID3AQ99856 593 aa10.5□□□□□ -0.73
MDM2-230ENST00000543323 GABBR2O75899 941 aa10.49□□□□□ -0.73
MDM2-230ENST00000543323 OXER1Q8TDS5 423 aa10.49□□□□□ -0.73
MDM2-230ENST00000543323 DDX12PQ92771 950 aa10.48□□□□□ -0.73
MDM2-230ENST00000543323 OCEL1Q9H607 264 aa10.48□□□□□ -0.73
MDM2-230ENST00000543323 ONECUT3O60422 494 aaPredicted RBP10.47□□□□□ -0.73
MDM2-230ENST00000543323 PTGDRQ13258 359 aa10.46□□□□□ -0.73
MDM2-230ENST00000543323 POTEHQ6S545 545 aa10.46□□□□□ -0.73
MDM2-230ENST00000543323 TBC1D12O60347 775 aa10.45□□□□□ -0.74
MDM2-230ENST00000543323 GIGYF2Q6Y7W6 1299 aaKnown RBP10.45□□□□□ -0.74
MDM2-230ENST00000543323 ARID3CA6NKF2 412 aa10.44□□□□□ -0.74
MDM2-230ENST00000543323 APBB1O00213 710 aa10.44□□□□□ -0.74
MDM2-230ENST00000543323 PRIM1P49642 420 aaKnown RBP10.44□□□□□ -0.74
MDM2-230ENST00000543323 PCMTD1Q96MG8 357 aaPredicted RBP10.44□□□□□ -0.74
MDM2-230ENST00000543323 MS4A1P11836 297 aa10.43□□□□□ -0.74
MDM2-230ENST00000543323 TRIM26Q12899 539 aaPredicted RBP10.43□□□□□ -0.74
MDM2-230ENST00000543323 A6NJR5 290 aa10.42□□□□□ -0.74
MDM2-230ENST00000543323 EVI5O60447 810 aa10.42□□□□□ -0.74
MDM2-230ENST00000543323 PLCG2P16885 1265 aa10.41□□□□□ -0.74
MDM2-230ENST00000543323 TMEM92Q6UXU6 159 aa10.4□□□□□ -0.74
MDM2-230ENST00000543323 L3MBTL3Q96JM7 780 aaPredicted RBP10.4□□□□□ -0.74
MDM2-230ENST00000543323 REPIN1Q9BWE0 567 aaKnown RBP10.4□□□□□ -0.74
MDM2-230ENST00000543323 PELP1Q8IZL8 1130 aaKnown RBP10.39□□□□□ -0.75
MDM2-230ENST00000543323 SH3D19Q5HYK7 790 aa10.38□□□□□ -0.75
MDM2-230ENST00000543323 DCBLD2Q96PD2 775 aa10.38□□□□□ -0.75
MDM2-230ENST00000543323 CLUAP1Q96AJ1 413 aa10.37□□□□□ -0.75
MDM2-230ENST00000543323 TMUB1Q9BVT8 246 aa10.37□□□□□ -0.75
MDM2-230ENST00000543323 TRAK2O60296 914 aa10.36□□□□□ -0.75
MDM2-230ENST00000543323 CLCN1P35523 988 aa10.36□□□□□ -0.75
MDM2-230ENST00000543323 HRCP23327 699 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms