RNA–Protein interactions for RNA: ENST00000542279.5

GTF2H3-209, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-209ENST00000542279 ZNF316A6NFI3 1004 aaPredicted RBP9.81□□□□□ -0.84
GTF2H3-209ENST00000542279 TMEM92Q6UXU6 159 aa9.8□□□□□ -0.84
GTF2H3-209ENST00000542279 LSM11P83369 360 aaKnown RBP eCLIP9.78□□□□□ -0.84
GTF2H3-209ENST00000542279 RIOK3O14730 519 aaKnown RBP9.76□□□□□ -0.85
GTF2H3-209ENST00000542279 TAOK2Q9UL54 1235 aa9.75□□□□□ -0.85
GTF2H3-209ENST00000542279 PHF8Q9UPP1 1060 aa9.75□□□□□ -0.85
GTF2H3-209ENST00000542279 VGFO15240 615 aaPredicted RBP9.74□□□□□ -0.85
GTF2H3-209ENST00000542279 PBX2P40425 430 aa9.74□□□□□ -0.85
GTF2H3-209ENST00000542279 NLRP6P59044 892 aa9.74□□□□□ -0.85
GTF2H3-209ENST00000542279 PLA2G2EQ9NZK7 142 aa9.74□□□□□ -0.85
GTF2H3-209ENST00000542279 HCSTQ9UBK5 93 aa9.74□□□□□ -0.85
GTF2H3-209ENST00000542279 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.72□□□□□ -0.85
GTF2H3-209ENST00000542279 ZFP91Q96JP5 570 aaPredicted RBP9.72□□□□□ -0.85
GTF2H3-209ENST00000542279 KHSRPQ92945 711 aaKnown RBP eCLIP9.71□□□□□ -0.863e-6■■■□□ 18.6
GTF2H3-209ENST00000542279 MS4A4AQ96JQ5 239 aa9.7□□□□□ -0.86
GTF2H3-209ENST00000542279 STAC3Q96MF2 364 aa9.68□□□□□ -0.86
GTF2H3-209ENST00000542279 NUDT7P0C024 238 aa9.67□□□□□ -0.86
GTF2H3-209ENST00000542279 AXIN2Q9Y2T1 843 aa9.64□□□□□ -0.87
GTF2H3-209ENST00000542279 LHX6Q9UPM6 363 aa9.63□□□□□ -0.87
GTF2H3-209ENST00000542279 PSDA5PKW4 1024 aaPredicted RBP9.62□□□□□ -0.87
GTF2H3-209ENST00000542279 ARHGAP33O14559 1287 aa9.61□□□□□ -0.87
GTF2H3-209ENST00000542279 TMC2Q8TDI7 906 aa9.61□□□□□ -0.87
GTF2H3-209ENST00000542279 C2orf72A6NCS6 295 aa9.6□□□□□ -0.87
GTF2H3-209ENST00000542279 PCDHGA4Q9Y5G9 962 aa9.6□□□□□ -0.87
GTF2H3-209ENST00000542279 STK24Q9Y6E0 443 aa9.6□□□□□ -0.87
GTF2H3-209ENST00000542279 BCL11BQ9C0K0 894 aaPredicted RBP9.59□□□□□ -0.87
GTF2H3-209ENST00000542279 SLC34A2O95436 690 aa9.58□□□□□ -0.88
GTF2H3-209ENST00000542279 ADGRD1Q6QNK2 874 aa9.58□□□□□ -0.88
GTF2H3-209ENST00000542279 RNF25Q96BH1 459 aaPredicted RBP9.56□□□□□ -0.88
GTF2H3-209ENST00000542279 FBXO22Q8NEZ5 403 aa9.55□□□□□ -0.88
GTF2H3-209ENST00000542279 KCNH8Q96L42 1107 aa9.55□□□□□ -0.88
GTF2H3-209ENST00000542279 KIF3CO14782 793 aa9.54□□□□□ -0.88
GTF2H3-209ENST00000542279 TK2O00142 265 aa9.53□□□□□ -0.88
GTF2H3-209ENST00000542279 STK25O00506 426 aa9.52□□□□□ -0.89
GTF2H3-209ENST00000542279 POTEEQ6S8J3 1075 aa9.52□□□□□ -0.89
GTF2H3-209ENST00000542279 KCTD12Q96CX2 325 aaKnown RBP9.51□□□□□ -0.89
GTF2H3-209ENST00000542279 MFRPQ9BY79 579 aa9.5□□□□□ -0.89
GTF2H3-209ENST00000542279 TBC1D12O60347 775 aa9.49□□□□□ -0.89
GTF2H3-209ENST00000542279 PPP4R3BQ5MIZ7 849 aa9.47□□□□□ -0.89
GTF2H3-209ENST00000542279 RGS20O76081 388 aa9.44□□□□□ -0.9
GTF2H3-209ENST00000542279 PSEN2P49810 448 aa9.44□□□□□ -0.9
GTF2H3-209ENST00000542279 PTPN5P54829 565 aa9.43□□□□□ -0.9
GTF2H3-209ENST00000542279 IRX2Q9BZI1 471 aaPredicted RBP9.43□□□□□ -0.9
GTF2H3-209ENST00000542279 HRO43593 1189 aa9.42□□□□□ -0.9
GTF2H3-209ENST00000542279 GOLGA8CPA6NN73 597 aa9.41□□□□□ -0.9
GTF2H3-209ENST00000542279 DMRTA1Q5VZB9 504 aa9.41□□□□□ -0.9
GTF2H3-209ENST00000542279 PTCD2Q8WV60 388 aaKnown RBP9.41□□□□□ -0.9
GTF2H3-209ENST00000542279 ECM2O94769 699 aaPredicted RBP9.38□□□□□ -0.91
GTF2H3-209ENST00000542279 KCNK17Q96T54 332 aa9.37□□□□□ -0.91
GTF2H3-209ENST00000542279 PLPP6Q8IY26 295 aa9.36□□□□□ -0.91
GTF2H3-209ENST00000542279 FOXK1P85037 733 aa9.33□□□□□ -0.92
GTF2H3-209ENST00000542279 IFFO2Q5TF58 517 aa9.33□□□□□ -0.92
GTF2H3-209ENST00000542279 KDM4FA0A1W2PPD8 638 aa9.32□□□□□ -0.92
GTF2H3-209ENST00000542279 VPS9D1Q9Y2B5 631 aa9.32□□□□□ -0.92
GTF2H3-209ENST00000542279 GPHNQ9NQX3 736 aaPredicted RBP9.3□□□□□ -0.92
GTF2H3-209ENST00000542279 PPP1R37O75864 691 aa9.29□□□□□ -0.92
GTF2H3-209ENST00000542279 MRPL50Q8N5N7 158 aaKnown RBP9.28□□□□□ -0.92
GTF2H3-209ENST00000542279 ZNF454Q8N9F8 522 aa9.28□□□□□ -0.92
GTF2H3-209ENST00000542279 WNT2BQ93097 391 aa9.28□□□□□ -0.92
GTF2H3-209ENST00000542279 A0A0G2JS52 829 aa9.26□□□□□ -0.93
GTF2H3-209ENST00000542279 PTPREP23469 700 aa9.26□□□□□ -0.93
GTF2H3-209ENST00000542279 THSD4Q6ZMP0 1018 aa9.26□□□□□ -0.93
GTF2H3-209ENST00000542279 SLC4A5Q9BY07 1137 aa9.26□□□□□ -0.93
GTF2H3-209ENST00000542279 DSG2Q14126 1118 aa9.24□□□□□ -0.93
GTF2H3-209ENST00000542279 NBPF3Q9H094 633 aa9.24□□□□□ -0.93
GTF2H3-209ENST00000542279 BCL2L12Q9HB09 334 aa9.23□□□□□ -0.93
GTF2H3-209ENST00000542279 AMER1Q5JTC6 1135 aaPredicted RBP9.22□□□□□ -0.93
GTF2H3-209ENST00000542279 RTN4Q9NQC3 1192 aaKnown RBP9.22□□□□□ -0.93
GTF2H3-209ENST00000542279 RGL2O15211 777 aa9.21□□□□□ -0.94
GTF2H3-209ENST00000542279 Q6ZNB5 142 aa9.21□□□□□ -0.94
GTF2H3-209ENST00000542279 UPF1Q92900 1129 aaKnown RBP eCLIP9.21□□□□□ -0.94
GTF2H3-209ENST00000542279 BHMG1C9JSJ3 638 aaPredicted RBP9.19□□□□□ -0.94
GTF2H3-209ENST00000542279 OXER1Q8TDS5 423 aa9.17□□□□□ -0.94
GTF2H3-209ENST00000542279 ZBED2Q9BTP6 218 aa9.16□□□□□ -0.94
GTF2H3-209ENST00000542279 ANKK1Q8NFD2 765 aa9.15□□□□□ -0.94
GTF2H3-209ENST00000542279 FOSBP53539 338 aa9.14□□□□□ -0.95
GTF2H3-209ENST00000542279 ZDHHC16Q969W1 377 aa9.14□□□□□ -0.95
GTF2H3-209ENST00000542279 RYDENQ9NUL5 291 aaKnown RBP9.13□□□□□ -0.95
GTF2H3-209ENST00000542279 LAPTM4AQ15012 233 aa9.11□□□□□ -0.95
GTF2H3-209ENST00000542279 PDE4AP27815 886 aa9.1□□□□□ -0.95
GTF2H3-209ENST00000542279 PKD2Q13563 968 aa9.1□□□□□ -0.95
GTF2H3-209ENST00000542279 JPH4Q96JJ6 628 aa9.1□□□□□ -0.95
GTF2H3-209ENST00000542279 PPP1R15BQ5SWA1 713 aa9.09□□□□□ -0.95
GTF2H3-209ENST00000542279 NYAP1Q6ZVC0 841 aa9.09□□□□□ -0.95
GTF2H3-209ENST00000542279 EVI5O60447 810 aa9.08□□□□□ -0.96
GTF2H3-209ENST00000542279 MAP3K9P80192 1104 aa9.08□□□□□ -0.96
GTF2H3-209ENST00000542279 KCNC4Q03721 635 aa9.08□□□□□ -0.96
GTF2H3-209ENST00000542279 ANO8Q9HCE9 1232 aaPredicted RBP9.08□□□□□ -0.96
GTF2H3-209ENST00000542279 RABGEF1Q9UJ41 708 aa9.07□□□□□ -0.96
GTF2H3-209ENST00000542279 ITGBL1O95965 494 aaPredicted RBP9.06□□□□□ -0.96
GTF2H3-209ENST00000542279 ADAM33Q9BZ11 813 aa9.06□□□□□ -0.96
GTF2H3-209ENST00000542279 LAPTM4BQ86VI4 370 aa9.05□□□□□ -0.96
GTF2H3-209ENST00000542279 HS6ST3Q8IZP7 471 aa9.05□□□□□ -0.96
GTF2H3-209ENST00000542279 PPP1R3GB7ZBB8 358 aa9.03□□□□□ -0.96
GTF2H3-209ENST00000542279 CHGAP10645 457 aaKnown RBP9.03□□□□□ -0.96
GTF2H3-209ENST00000542279 SOWAHBA6NEL2 793 aa9.02□□□□□ -0.97
GTF2H3-209ENST00000542279 GFRA3O60609 400 aa9.01□□□□□ -0.97
GTF2H3-209ENST00000542279 BCAMP50895 628 aa9.01□□□□□ -0.97
GTF2H3-209ENST00000542279 TRAF7Q6Q0C0 670 aa9.01□□□□□ -0.97
GTF2H3-209ENST00000542279 CRISPLD2Q9H0B8 497 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms