RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 PDAP1Q13442 181 aaKnown RBP10.98□□□□□ -0.65
LEMD3-204ENST00000542032 ECM2O94769 699 aaPredicted RBP10.97□□□□□ -0.65
LEMD3-204ENST00000542032 ARSIQ5FYB1 569 aa10.97□□□□□ -0.65
LEMD3-204ENST00000542032 CABP2Q9NPB3 220 aa10.97□□□□□ -0.65
LEMD3-204ENST00000542032 RIOK3O14730 519 aaKnown RBP10.96□□□□□ -0.65
LEMD3-204ENST00000542032 ZNF316A6NFI3 1004 aaPredicted RBP10.95□□□□□ -0.66
LEMD3-204ENST00000542032 TMEM92Q6UXU6 159 aa10.95□□□□□ -0.66
LEMD3-204ENST00000542032 KHSRPQ92945 711 aaKnown RBP eCLIP10.93□□□□□ -0.664e-7■■□□□ 12.5
LEMD3-204ENST00000542032 RGL2O15211 777 aa10.91□□□□□ -0.66
LEMD3-204ENST00000542032 VGFO15240 615 aaPredicted RBP10.91□□□□□ -0.66
LEMD3-204ENST00000542032 AXIN2Q9Y2T1 843 aa10.89□□□□□ -0.67
LEMD3-204ENST00000542032 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.87□□□□□ -0.67
LEMD3-204ENST00000542032 POTEEQ6S8J3 1075 aa10.87□□□□□ -0.67
LEMD3-204ENST00000542032 ZFP91Q96JP5 570 aaPredicted RBP10.87□□□□□ -0.67
LEMD3-204ENST00000542032 PBX2P40425 430 aa10.85□□□□□ -0.67
LEMD3-204ENST00000542032 TAOK2Q9UL54 1235 aa10.84□□□□□ -0.67
LEMD3-204ENST00000542032 RGS20O76081 388 aa10.83□□□□□ -0.68
LEMD3-204ENST00000542032 MICALL2Q8IY33 904 aa10.82□□□□□ -0.68
LEMD3-204ENST00000542032 ADGRD1Q6QNK2 874 aa10.79□□□□□ -0.68
LEMD3-204ENST00000542032 EFCAB3Q8N7B9 438 aa10.77□□□□□ -0.69
LEMD3-204ENST00000542032 BCL11BQ9C0K0 894 aaPredicted RBP10.77□□□□□ -0.69
LEMD3-204ENST00000542032 KCTD12Q96CX2 325 aaKnown RBP10.75□□□□□ -0.69
LEMD3-204ENST00000542032 AMER1Q5JTC6 1135 aaPredicted RBP10.74□□□□□ -0.69
LEMD3-204ENST00000542032 Q6ZNB5 142 aa10.74□□□□□ -0.69
LEMD3-204ENST00000542032 STK25O00506 426 aa10.73□□□□□ -0.69
LEMD3-204ENST00000542032 NUDT7P0C024 238 aa10.73□□□□□ -0.69
LEMD3-204ENST00000542032 STK24Q9Y6E0 443 aa10.73□□□□□ -0.69
LEMD3-204ENST00000542032 SOX12O15370 315 aa10.72□□□□□ -0.69
LEMD3-204ENST00000542032 HS6ST3Q8IZP7 471 aa10.7□□□□□ -0.7
LEMD3-204ENST00000542032 RTN4Q9NQC3 1192 aaKnown RBP10.7□□□□□ -0.7
LEMD3-204ENST00000542032 LHX6Q9UPM6 363 aa10.7□□□□□ -0.7
LEMD3-204ENST00000542032 A0A0G2JS52 829 aa10.67□□□□□ -0.7
LEMD3-204ENST00000542032 MS4A4AQ96JQ5 239 aa10.67□□□□□ -0.7
LEMD3-204ENST00000542032 DNAJC5Q9H3Z4 198 aa10.67□□□□□ -0.7
LEMD3-204ENST00000542032 FBXO22Q8NEZ5 403 aa10.66□□□□□ -0.7
LEMD3-204ENST00000542032 PHF8Q9UPP1 1060 aa10.66□□□□□ -0.7
LEMD3-204ENST00000542032 ARHGAP33O14559 1287 aa10.65□□□□□ -0.7
LEMD3-204ENST00000542032 HRO43593 1189 aa10.65□□□□□ -0.7
LEMD3-204ENST00000542032 MFRPQ9BY79 579 aa10.65□□□□□ -0.7
LEMD3-204ENST00000542032 PTPN5P54829 565 aa10.64□□□□□ -0.71
LEMD3-204ENST00000542032 IFFO2Q5TF58 517 aa10.63□□□□□ -0.71
LEMD3-204ENST00000542032 CHGAP10645 457 aaKnown RBP10.62□□□□□ -0.71
LEMD3-204ENST00000542032 NLRP6P59044 892 aa10.61□□□□□ -0.71
LEMD3-204ENST00000542032 TK2O00142 265 aa10.6□□□□□ -0.71
LEMD3-204ENST00000542032 DMRTA1Q5VZB9 504 aa10.6□□□□□ -0.71
LEMD3-204ENST00000542032 STAC3Q96MF2 364 aa10.58□□□□□ -0.72
LEMD3-204ENST00000542032 NKX1-1Q15270 411 aaPredicted RBP10.57□□□□□ -0.72
LEMD3-204ENST00000542032 PSEN2P49810 448 aa10.55□□□□□ -0.72
LEMD3-204ENST00000542032 PCDHGA4Q9Y5G9 962 aa10.53□□□□□ -0.72
LEMD3-204ENST00000542032 LCE2BO14633 110 aa10.5□□□□□ -0.73
LEMD3-204ENST00000542032 DCAF8L2P0C7V8 631 aa10.5□□□□□ -0.73
LEMD3-204ENST00000542032 PPP1R37O75864 691 aa10.48□□□□□ -0.73
LEMD3-204ENST00000542032 GTPBP6O43824 516 aaPredicted RBP10.44□□□□□ -0.74
LEMD3-204ENST00000542032 RYDENQ9NUL5 291 aaKnown RBP10.44□□□□□ -0.74
LEMD3-204ENST00000542032 PSDA5PKW4 1024 aaPredicted RBP10.43□□□□□ -0.74
LEMD3-204ENST00000542032 C2orf72A6NCS6 295 aa10.42□□□□□ -0.74
LEMD3-204ENST00000542032 TRAF7Q6Q0C0 670 aa10.42□□□□□ -0.74
LEMD3-204ENST00000542032 KIF3CO14782 793 aa10.41□□□□□ -0.74
LEMD3-204ENST00000542032 THSD4Q6ZMP0 1018 aa10.41□□□□□ -0.74
LEMD3-204ENST00000542032 SLC34A2O95436 690 aa10.4□□□□□ -0.74
LEMD3-204ENST00000542032 BBXQ8WY36 941 aaPredicted RBP10.4□□□□□ -0.74
LEMD3-204ENST00000542032 LAPTM4AQ15012 233 aa10.35□□□□□ -0.75
LEMD3-204ENST00000542032 VPS9D1Q9Y2B5 631 aa10.35□□□□□ -0.75
LEMD3-204ENST00000542032 KCNK17Q96T54 332 aa10.34□□□□□ -0.75
LEMD3-204ENST00000542032 PPP4R3BQ5MIZ7 849 aa10.32□□□□□ -0.76
LEMD3-204ENST00000542032 GFRA3O60609 400 aa10.31□□□□□ -0.76
LEMD3-204ENST00000542032 WNT2BQ93097 391 aa10.3□□□□□ -0.76
LEMD3-204ENST00000542032 KDM4FA0A1W2PPD8 638 aa10.29□□□□□ -0.76
LEMD3-204ENST00000542032 ZNF775Q96BV0 537 aaPredicted RBP10.29□□□□□ -0.76
LEMD3-204ENST00000542032 KCNH8Q96L42 1107 aa10.29□□□□□ -0.76
LEMD3-204ENST00000542032 GOLGA8CPA6NN73 597 aa10.28□□□□□ -0.76
LEMD3-204ENST00000542032 ZNF787Q6DD87 383 aa10.28□□□□□ -0.76
LEMD3-204ENST00000542032 CRISPLD2Q9H0B8 497 aa10.26□□□□□ -0.77
LEMD3-204ENST00000542032 GPHNQ9NQX3 736 aaPredicted RBP10.26□□□□□ -0.77
LEMD3-204ENST00000542032 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.26□□□□□ -0.77
LEMD3-204ENST00000542032 ITGBL1O95965 494 aaPredicted RBP10.25□□□□□ -0.77
LEMD3-204ENST00000542032 SPRYD3Q8NCJ5 442 aa10.25□□□□□ -0.77
LEMD3-204ENST00000542032 TMC2Q8TDI7 906 aa10.25□□□□□ -0.77
LEMD3-204ENST00000542032 FOXK1P85037 733 aa10.23□□□□□ -0.77
LEMD3-204ENST00000542032 NCKAP5LQ9HCH0 1330 aa10.22□□□□□ -0.77
LEMD3-204ENST00000542032 BHMG1C9JSJ3 638 aaPredicted RBP10.21□□□□□ -0.77
LEMD3-204ENST00000542032 CADPS2Q86UW7 1296 aa10.2□□□□□ -0.78
LEMD3-204ENST00000542032 DSG2Q14126 1118 aa10.19□□□□□ -0.78
LEMD3-204ENST00000542032 MRPL50Q8N5N7 158 aaKnown RBP10.19□□□□□ -0.78
LEMD3-204ENST00000542032 PAXIP1Q6ZW49 1069 aaPredicted RBP10.18□□□□□ -0.78
LEMD3-204ENST00000542032 PDE4AP27815 886 aa10.17□□□□□ -0.78
LEMD3-204ENST00000542032 MFSD10Q14728 455 aa10.16□□□□□ -0.78
LEMD3-204ENST00000542032 PLPP6Q8IY26 295 aa10.16□□□□□ -0.78
LEMD3-204ENST00000542032 PTCD2Q8WV60 388 aaKnown RBP10.15□□□□□ -0.78
LEMD3-204ENST00000542032 CFAP44Q96MT7 982 aa10.15□□□□□ -0.78
LEMD3-204ENST00000542032 SLC4A5Q9BY07 1137 aa10.15□□□□□ -0.78
LEMD3-204ENST00000542032 NRG2O14511 850 aaPredicted RBP10.13□□□□□ -0.79
LEMD3-204ENST00000542032 PPP1R15BQ5SWA1 713 aa10.13□□□□□ -0.79
LEMD3-204ENST00000542032 KCNC4Q03721 635 aa10.1□□□□□ -0.79
LEMD3-204ENST00000542032 DDX27Q96GQ7 796 aaKnown RBP10.1□□□□□ -0.79
LEMD3-204ENST00000542032 LARP6Q9BRS8 491 aaKnown RBP10.1□□□□□ -0.79
LEMD3-204ENST00000542032 ZBED2Q9BTP6 218 aa10.08□□□□□ -0.8
LEMD3-204ENST00000542032 OXER1Q8TDS5 423 aa10.07□□□□□ -0.8
LEMD3-204ENST00000542032 NBPF3Q9H094 633 aa10.06□□□□□ -0.8
LEMD3-204ENST00000542032 ZNF454Q8N9F8 522 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms