RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
TTR-203ENST00000541025 NKX1-1Q15270 411 aaPredicted RBP14.2□□□□□ -0.14
TTR-203ENST00000541025 RIMBP2O15034 1052 aa14.19□□□□□ -0.14
TTR-203ENST00000541025 MARVELD3Q96A59 401 aa14.18□□□□□ -0.14
TTR-203ENST00000541025 AMER1Q5JTC6 1135 aaPredicted RBP14.17□□□□□ -0.14
TTR-203ENST00000541025 KIF3CO14782 793 aa14.16□□□□□ -0.14
TTR-203ENST00000541025 CDAN1Q8IWY9 1227 aa14.16□□□□□ -0.14
TTR-203ENST00000541025 HOXB1P14653 301 aaPredicted RBP14.15□□□□□ -0.14
TTR-203ENST00000541025 ZSWIM6Q9HCJ5 1215 aa14.15□□□□□ -0.14
TTR-203ENST00000541025 C2orf72A6NCS6 295 aa14.14□□□□□ -0.15
TTR-203ENST00000541025 EMP3P54852 163 aa14.14□□□□□ -0.15
TTR-203ENST00000541025 TMC2Q8TDI7 906 aa14.13□□□□□ -0.15
TTR-203ENST00000541025 FAM205CA6NFA0 338 aa14.06□□□□□ -0.16
TTR-203ENST00000541025 GTPBP6O43824 516 aaPredicted RBP14.06□□□□□ -0.16
TTR-203ENST00000541025 GPR153Q6NV75 609 aa14.06□□□□□ -0.16
TTR-203ENST00000541025 PLSCR2Q9NRY7 297 aa14.05□□□□□ -0.16
TTR-203ENST00000541025 HS3ST6Q96QI5 342 aa14.03□□□□□ -0.16
TTR-203ENST00000541025 GPHNQ9NQX3 736 aaPredicted RBP14.03□□□□□ -0.16
TTR-203ENST00000541025 RTN4Q9NQC3 1192 aaKnown RBP14.02□□□□□ -0.17
TTR-203ENST00000541025 SLC34A2O95436 690 aa14.01□□□□□ -0.17
TTR-203ENST00000541025 ERBB3P21860 1342 aa14□□□□□ -0.17
TTR-203ENST00000541025 ARSIQ5FYB1 569 aa13.99□□□□□ -0.17
TTR-203ENST00000541025 POTEB3A0JP26 581 aa13.98□□□□□ -0.17
TTR-203ENST00000541025 FOXK1P85037 733 aa13.98□□□□□ -0.17
TTR-203ENST00000541025 POTEBQ6S5H4 581 aa13.98□□□□□ -0.17
TTR-203ENST00000541025 BBXQ8WY36 941 aaPredicted RBP13.95□□□□□ -0.18
TTR-203ENST00000541025 PLPP6Q8IY26 295 aa13.94□□□□□ -0.18
TTR-203ENST00000541025 PDE4AP27815 886 aa13.92□□□□□ -0.18
TTR-203ENST00000541025 PCDHGA4Q9Y5G9 962 aa13.91□□□□□ -0.18
TTR-203ENST00000541025 DSG2Q14126 1118 aa13.9□□□□□ -0.18
TTR-203ENST00000541025 CRISPLD2Q9H0B8 497 aa13.9□□□□□ -0.18
TTR-203ENST00000541025 VARS2Q5ST30 1063 aaKnown RBP13.89□□□□□ -0.19
TTR-203ENST00000541025 KHSRPQ92945 711 aaKnown RBP eCLIP13.89□□□□□ -0.19
TTR-203ENST00000541025 PTCD2Q8WV60 388 aaKnown RBP13.88□□□□□ -0.19
TTR-203ENST00000541025 ZNF316A6NFI3 1004 aaPredicted RBP13.87□□□□□ -0.19
TTR-203ENST00000541025 ZNF687Q8N1G0 1237 aa13.85□□□□□ -0.19
TTR-203ENST00000541025 KRTAP3-3Q9BYR6 98 aa13.85□□□□□ -0.19
TTR-203ENST00000541025 KRTAP3-2Q9BYR7 98 aa13.85□□□□□ -0.19
TTR-203ENST00000541025 TBC1D12O60347 775 aa13.84□□□□□ -0.19
TTR-203ENST00000541025 NUDT7P0C024 238 aa13.84□□□□□ -0.19
TTR-203ENST00000541025 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.83□□□□□ -0.2
TTR-203ENST00000541025 NCKAP5LQ9HCH0 1330 aa13.83□□□□□ -0.2
TTR-203ENST00000541025 PPP1R15BQ5SWA1 713 aa13.81□□□□□ -0.2
TTR-203ENST00000541025 SPNS2Q8IVW8 549 aa13.8□□□□□ -0.2
TTR-203ENST00000541025 SPRYD3Q8NCJ5 442 aa13.79□□□□□ -0.2
TTR-203ENST00000541025 LARP6Q9BRS8 491 aaKnown RBP13.79□□□□□ -0.2
TTR-203ENST00000541025 LHX6Q9UPM6 363 aa13.78□□□□□ -0.2
TTR-203ENST00000541025 KDM4FA0A1W2PPD8 638 aa13.77□□□□□ -0.21
TTR-203ENST00000541025 OXER1Q8TDS5 423 aa13.76□□□□□ -0.21
TTR-203ENST00000541025 DDX27Q96GQ7 796 aaKnown RBP13.76□□□□□ -0.21
TTR-203ENST00000541025 CCDC180Q9P1Z9 1646 aa13.75□□□□□ -0.21
TTR-203ENST00000541025 PSDA5PKW4 1024 aaPredicted RBP13.75□□□□□ -0.21
TTR-203ENST00000541025 MFSD10Q14728 455 aa13.75□□□□□ -0.21
TTR-203ENST00000541025 CADPS2Q86UW7 1296 aa13.72□□□□□ -0.21
TTR-203ENST00000541025 MMRN1Q13201 1228 aa13.7□□□□□ -0.22
TTR-203ENST00000541025 PBX2P40425 430 aa13.68□□□□□ -0.22
TTR-203ENST00000541025 UPF1Q92900 1129 aaKnown RBP eCLIP13.68□□□□□ -0.22
TTR-203ENST00000541025 PAXIP1Q6ZW49 1069 aaPredicted RBP13.65□□□□□ -0.22
TTR-203ENST00000541025 CFAP44Q96MT7 982 aa13.64□□□□□ -0.23
TTR-203ENST00000541025 MAP3K9P80192 1104 aa13.61□□□□□ -0.23
TTR-203ENST00000541025 PPP4R3BQ5MIZ7 849 aa13.61□□□□□ -0.23
TTR-203ENST00000541025 ANO8Q9HCE9 1232 aaPredicted RBP13.61□□□□□ -0.23
TTR-203ENST00000541025 LSM11P83369 360 aaKnown RBP eCLIP13.59□□□□□ -0.23
TTR-203ENST00000541025 ARHGAP33O14559 1287 aa13.58□□□□□ -0.24
TTR-203ENST00000541025 POTEEQ6S8J3 1075 aa13.58□□□□□ -0.24
TTR-203ENST00000541025 ANKRD13DQ6ZTN6 518 aa13.58□□□□□ -0.24
TTR-203ENST00000541025 EMILIN3Q9NT22 766 aa13.58□□□□□ -0.24
TTR-203ENST00000541025 EVI5O60447 810 aa13.57□□□□□ -0.24
TTR-203ENST00000541025 PTGER2P43116 358 aa13.56□□□□□ -0.24
TTR-203ENST00000541025 CAMK2BQ13554 666 aa13.56□□□□□ -0.24
TTR-203ENST00000541025 AXIN2Q9Y2T1 843 aa13.56□□□□□ -0.24
TTR-203ENST00000541025 FOSBP53539 338 aa13.51□□□□□ -0.25
TTR-203ENST00000541025 ZNF454Q8N9F8 522 aa13.51□□□□□ -0.25
TTR-203ENST00000541025 MYT1LQ9UL68 1186 aa13.5□□□□□ -0.25
TTR-203ENST00000541025 KCNH8Q96L42 1107 aa13.49□□□□□ -0.25
TTR-203ENST00000541025 JPH4Q96JJ6 628 aa13.48□□□□□ -0.25
TTR-203ENST00000541025 TK2O00142 265 aa13.47□□□□□ -0.25
TTR-203ENST00000541025 PSEN2P49810 448 aa13.46□□□□□ -0.25
TTR-203ENST00000541025 BCL2L12Q9HB09 334 aa13.46□□□□□ -0.25
TTR-203ENST00000541025 WDR70Q9NW82 654 aa13.46□□□□□ -0.25
TTR-203ENST00000541025 RNF166Q96A37 237 aaPredicted RBP13.45□□□□□ -0.26
TTR-203ENST00000541025 DMRTA1Q5VZB9 504 aa13.43□□□□□ -0.26
TTR-203ENST00000541025 ADGRD1Q6QNK2 874 aa13.43□□□□□ -0.26
TTR-203ENST00000541025 ZDHHC16Q969W1 377 aa13.43□□□□□ -0.26
TTR-203ENST00000541025 DPYSL4O14531 572 aa13.42□□□□□ -0.26
TTR-203ENST00000541025 ABCC9O60706 1549 aa13.41□□□□□ -0.26
TTR-203ENST00000541025 E2F4Q16254 413 aa13.41□□□□□ -0.26
TTR-203ENST00000541025 KCNK17Q96T54 332 aa13.41□□□□□ -0.26
TTR-203ENST00000541025 PTPREP23469 700 aa13.4□□□□□ -0.26
TTR-203ENST00000541025 PHF14O94880 888 aa13.38□□□□□ -0.27
TTR-203ENST00000541025 SLC4A5Q9BY07 1137 aa13.38□□□□□ -0.27
TTR-203ENST00000541025 PCDHGA10Q9Y5H3 936 aa13.38□□□□□ -0.27
TTR-203ENST00000541025 ADAM33Q9BZ11 813 aa13.37□□□□□ -0.27
TTR-203ENST00000541025 SPDYE16A6NNV3 312 aaPredicted RBP13.36□□□□□ -0.27
TTR-203ENST00000541025 HRO43593 1189 aa13.36□□□□□ -0.27
TTR-203ENST00000541025 FBXW7Q969H0 707 aa13.36□□□□□ -0.27
TTR-203ENST00000541025 TYW1BQ6NUM6 668 aa13.35□□□□□ -0.27
TTR-203ENST00000541025 EPAS1Q99814 870 aa13.35□□□□□ -0.27
TTR-203ENST00000541025 ARIH1Q9Y4X5 557 aaPredicted RBP13.35□□□□□ -0.27
TTR-203ENST00000541025 TSHZ2Q9NRE2 1034 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms