RNA–Protein interactions for RNA: ENST00000540838.1

KDM5A-207, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-207ENST00000540838 FAM163AQ96GL9 167 aaPredicted RBP10.89□□□□□ -0.67
KDM5A-207ENST00000540838 BOLA1Q9Y3E2 137 aa10.88□□□□□ -0.67
KDM5A-207ENST00000540838 NLRP6P59044 892 aa10.85□□□□□ -0.67
KDM5A-207ENST00000540838 DNAJC5Q9H3Z4 198 aa10.85□□□□□ -0.67
KDM5A-207ENST00000540838 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.85□□□□□ -0.67
KDM5A-207ENST00000540838 MS4A4AQ96JQ5 239 aa10.84□□□□□ -0.67
KDM5A-207ENST00000540838 KDM2AQ9Y2K7 1162 aa10.84□□□□□ -0.67
KDM5A-207ENST00000540838 CHGAP10645 457 aaKnown RBP10.83□□□□□ -0.68
KDM5A-207ENST00000540838 MFRPQ9BY79 579 aa10.81□□□□□ -0.68
KDM5A-207ENST00000540838 PRKCSHP14314 528 aaPredicted RBP10.8□□□□□ -0.68
KDM5A-207ENST00000540838 NCAPD3P42695 1498 aa10.8□□□□□ -0.68
KDM5A-207ENST00000540838 PAXIP1Q6ZW49 1069 aaPredicted RBP10.79□□□□□ -0.68
KDM5A-207ENST00000540838 FBXO22Q8NEZ5 403 aa10.79□□□□□ -0.68
KDM5A-207ENST00000540838 MICALL2Q8IY33 904 aa10.78□□□□□ -0.68
KDM5A-207ENST00000540838 HS6ST3Q8IZP7 471 aa10.77□□□□□ -0.69
KDM5A-207ENST00000540838 TMEM121BQ9BXQ6 578 aaPredicted RBP10.76□□□□□ -0.69
KDM5A-207ENST00000540838 POTEMA6NI47 508 aa10.74□□□□□ -0.69
KDM5A-207ENST00000540838 SNPHO15079 494 aa10.74□□□□□ -0.69
KDM5A-207ENST00000540838 POTEGQ6S5H5 508 aa10.74□□□□□ -0.69
KDM5A-207ENST00000540838 CFAP44Q96MT7 982 aa10.74□□□□□ -0.69
KDM5A-207ENST00000540838 LCE2DQ5TA82 110 aaPredicted RBP10.73□□□□□ -0.69
KDM5A-207ENST00000540838 CUX2O14529 1486 aa10.73□□□□□ -0.69
KDM5A-207ENST00000540838 ATAD2BQ9ULI0 1458 aa10.73□□□□□ -0.69
KDM5A-207ENST00000540838 ST18O60284 1047 aa10.71□□□□□ -0.69
KDM5A-207ENST00000540838 ERCC6Q03468 1493 aa10.71□□□□□ -0.69
KDM5A-207ENST00000540838 SMARCA2P51531 1590 aa10.69□□□□□ -0.7
KDM5A-207ENST00000540838 SPRYD3Q8NCJ5 442 aa10.69□□□□□ -0.7
KDM5A-207ENST00000540838 TMEM92Q6UXU6 159 aa10.68□□□□□ -0.7
KDM5A-207ENST00000540838 PPP1R37O75864 691 aa10.67□□□□□ -0.7
KDM5A-207ENST00000540838 HMGXB3Q12766 1538 aa10.67□□□□□ -0.7
KDM5A-207ENST00000540838 SMARCA4P51532 1647 aa10.66□□□□□ -0.7
KDM5A-207ENST00000540838 TSHZ2Q9NRE2 1034 aa10.65□□□□□ -0.7
KDM5A-207ENST00000540838 NKX1-1Q15270 411 aaPredicted RBP10.64□□□□□ -0.71
KDM5A-207ENST00000540838 TPRNQ4KMQ1 711 aa10.64□□□□□ -0.71
KDM5A-207ENST00000540838 BAZ1AQ9NRL2 1556 aaPredicted RBP10.63□□□□□ -0.71
KDM5A-207ENST00000540838 BAZ1BQ9UIG0 1483 aaKnown RBP10.61□□□□□ -0.71
KDM5A-207ENST00000540838 MARVELD3Q96A59 401 aa10.61□□□□□ -0.71
KDM5A-207ENST00000540838 ZNF710Q8N1W2 664 aa10.6□□□□□ -0.71
KDM5A-207ENST00000540838 HOXB3P14651 431 aaPredicted RBP10.59□□□□□ -0.71
KDM5A-207ENST00000540838 PEG3Q9GZU2 1588 aa10.58□□□□□ -0.72
KDM5A-207ENST00000540838 DOK7Q18PE1 504 aa10.58□□□□□ -0.72
KDM5A-207ENST00000540838 NESP48681 1621 aa10.58□□□□□ -0.72
KDM5A-207ENST00000540838 RYDENQ9NUL5 291 aaKnown RBP10.57□□□□□ -0.72
KDM5A-207ENST00000540838 C2orf72A6NCS6 295 aa10.56□□□□□ -0.72
KDM5A-207ENST00000540838 TMC2Q8TDI7 906 aa10.56□□□□□ -0.72
KDM5A-207ENST00000540838 RIMBP2O15034 1052 aa10.54□□□□□ -0.72
KDM5A-207ENST00000540838 EMP3P54852 163 aa10.54□□□□□ -0.72
KDM5A-207ENST00000540838 LAMC3Q9Y6N6 1575 aa10.53□□□□□ -0.72
KDM5A-207ENST00000540838 PDS5BQ9NTI5 1447 aa10.52□□□□□ -0.73
KDM5A-207ENST00000540838 KIF3CO14782 793 aa10.51□□□□□ -0.73
KDM5A-207ENST00000540838 GTPBP6O43824 516 aaPredicted RBP10.51□□□□□ -0.73
KDM5A-207ENST00000540838 CDAN1Q8IWY9 1227 aa10.51□□□□□ -0.73
KDM5A-207ENST00000540838 MROH2BQ7Z745 1585 aa10.51□□□□□ -0.73
KDM5A-207ENST00000540838 PCDH10Q9P2E7 1040 aa10.5□□□□□ -0.73
KDM5A-207ENST00000540838 FAM205CA6NFA0 338 aa10.49□□□□□ -0.73
KDM5A-207ENST00000540838 HOXB1P14653 301 aaPredicted RBP10.49□□□□□ -0.73
KDM5A-207ENST00000540838 PLSCR2Q9NRY7 297 aa10.48□□□□□ -0.73
KDM5A-207ENST00000540838 CADPSQ9ULU8 1353 aa10.47□□□□□ -0.73
KDM5A-207ENST00000540838 THOC2Q8NI27 1593 aaKnown RBP10.47□□□□□ -0.73
KDM5A-207ENST00000540838 ARSIQ5FYB1 569 aa10.45□□□□□ -0.74
KDM5A-207ENST00000540838 ZSWIM6Q9HCJ5 1215 aa10.45□□□□□ -0.74
KDM5A-207ENST00000540838 ERBB3P21860 1342 aa10.44□□□□□ -0.74
KDM5A-207ENST00000540838 GPR153Q6NV75 609 aa10.44□□□□□ -0.74
KDM5A-207ENST00000540838 HS3ST6Q96QI5 342 aa10.44□□□□□ -0.74
KDM5A-207ENST00000540838 KHSRPQ92945 711 aaKnown RBP eCLIP10.43□□□□□ -0.74
KDM5A-207ENST00000540838 GPHNQ9NQX3 736 aaPredicted RBP10.43□□□□□ -0.74
KDM5A-207ENST00000540838 POTEB3A0JP26 581 aa10.41□□□□□ -0.74
KDM5A-207ENST00000540838 NBR1Q14596 966 aa10.41□□□□□ -0.74
KDM5A-207ENST00000540838 POTEBQ6S5H4 581 aa10.41□□□□□ -0.74
KDM5A-207ENST00000540838 PLPP6Q8IY26 295 aa10.41□□□□□ -0.74
KDM5A-207ENST00000540838 KIF21AQ7Z4S6 1674 aa10.41□□□□□ -0.74
KDM5A-207ENST00000540838 DSG2Q14126 1118 aa10.4□□□□□ -0.74
KDM5A-207ENST00000540838 FOXK1P85037 733 aa10.39□□□□□ -0.75
KDM5A-207ENST00000540838 MRC2Q9UBG0 1479 aa10.38□□□□□ -0.75
KDM5A-207ENST00000540838 PDE4AP27815 886 aa10.37□□□□□ -0.75
KDM5A-207ENST00000540838 VARS2Q5ST30 1063 aaKnown RBP10.37□□□□□ -0.75
KDM5A-207ENST00000540838 PCDHGA4Q9Y5G9 962 aa10.37□□□□□ -0.75
KDM5A-207ENST00000540838 SLC34A2O95436 690 aa10.36□□□□□ -0.75
KDM5A-207ENST00000540838 NUDT7P0C024 238 aa10.36□□□□□ -0.75
KDM5A-207ENST00000540838 WIZO95785 1651 aa10.36□□□□□ -0.75
KDM5A-207ENST00000540838 CRISPLD2Q9H0B8 497 aa10.35□□□□□ -0.75
KDM5A-207ENST00000540838 NCKAP5LQ9HCH0 1330 aa10.34□□□□□ -0.75
KDM5A-207ENST00000540838 WDR62O43379 1518 aa10.34□□□□□ -0.75
KDM5A-207ENST00000540838 LARP6Q9BRS8 491 aaKnown RBP10.34□□□□□ -0.75
KDM5A-207ENST00000540838 PPP1R15BQ5SWA1 713 aa10.33□□□□□ -0.76
KDM5A-207ENST00000540838 CEP164Q9UPV0 1460 aa10.33□□□□□ -0.76
KDM5A-207ENST00000540838 CFTRP13569 1480 aa10.32□□□□□ -0.76
KDM5A-207ENST00000540838 FANCD2Q9BXW9 1451 aa10.32□□□□□ -0.76
KDM5A-207ENST00000540838 ZNF316A6NFI3 1004 aaPredicted RBP10.32□□□□□ -0.76
KDM5A-207ENST00000540838 CADPS2Q86UW7 1296 aa10.31□□□□□ -0.76
KDM5A-207ENST00000540838 PTCD2Q8WV60 388 aaKnown RBP10.3□□□□□ -0.76
KDM5A-207ENST00000540838 UPF1Q92900 1129 aaKnown RBP eCLIP10.3□□□□□ -0.76
KDM5A-207ENST00000540838 RSF1Q96T23 1441 aaPredicted RBP10.3□□□□□ -0.76
KDM5A-207ENST00000540838 TBC1D12O60347 775 aa10.29□□□□□ -0.76
KDM5A-207ENST00000540838 DDX27Q96GQ7 796 aaKnown RBP10.29□□□□□ -0.76
KDM5A-207ENST00000540838 LHX6Q9UPM6 363 aa10.29□□□□□ -0.76
KDM5A-207ENST00000540838 KRTAP3-3Q9BYR6 98 aa10.28□□□□□ -0.76
KDM5A-207ENST00000540838 KRTAP3-2Q9BYR7 98 aa10.28□□□□□ -0.76
KDM5A-207ENST00000540838 ZNF687Q8N1G0 1237 aa10.26□□□□□ -0.77
KDM5A-207ENST00000540838 TOP2AP11388 1531 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms