RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 ABCC5O15440 1437 aa36.48■■■■□ 3.43
TTC3-225ENST00000540756 DNMT1P26358 1616 aaKnown RBP36.47■■■■□ 3.43
TTC3-225ENST00000540756 CDC42BPBQ9Y5S2 1711 aa36.47■■■■□ 3.43
TTC3-225ENST00000540756 HFM1A2PYH4 1435 aa36.46■■■■□ 3.43
TTC3-225ENST00000540756 RRP7BPQ9NSQ0 103 aa36.46■■■■□ 3.43
TTC3-225ENST00000540756 NAIPQ13075 1403 aa36.44■■■■□ 3.42
TTC3-225ENST00000540756 PREX2Q70Z35 1606 aa36.43■■■■□ 3.42
TTC3-225ENST00000540756 WDR7Q9Y4E6 1490 aa36.38■■■■□ 3.41
TTC3-225ENST00000540756 RIMBP3CA6NJZ7 1639 aa36.36■■■■□ 3.41
TTC3-225ENST00000540756 RIMBP3BA6NNM3 1639 aa36.36■■■■□ 3.41
TTC3-225ENST00000540756 RIMBP3Q9UFD9 1639 aa36.36■■■■□ 3.41
TTC3-225ENST00000540756 MYO5CQ9NQX4 1742 aa36.36■■■■□ 3.41
TTC3-225ENST00000540756 ASXL2Q76L83 1435 aa36.35■■■■□ 3.41
TTC3-225ENST00000540756 SAMD9LQ8IVG5 1584 aa36.34■■■■□ 3.41
TTC3-225ENST00000540756 ARHGAP5Q13017 1502 aa36.32■■■■□ 3.41
TTC3-225ENST00000540756 CYB5RLQ6IPT4 315 aa36.32■■■■□ 3.4
TTC3-225ENST00000540756 HNRNPMP52272 730 aaKnown RBP eCLIP36.3■■■■□ 3.43e-7■■■■□ 21.3
TTC3-225ENST00000540756 NPM1P06748 294 aaKnown RBP eCLIP36.3■■■■□ 3.4
TTC3-225ENST00000540756 GCC2Q8IWJ2 1684 aa36.3■■■■□ 3.4
TTC3-225ENST00000540756 AKNAQ7Z591 1439 aa36.29■■■■□ 3.4
TTC3-225ENST00000540756 KDM6BO15054 1643 aa36.29■■■■□ 3.4
TTC3-225ENST00000540756 CROCC2H7BZ55 1655 aa36.28■■■■□ 3.4
TTC3-225ENST00000540756 PLCH2O75038 1416 aa36.25■■■■□ 3.39
TTC3-225ENST00000540756 ROCK1Q13464 1354 aa36.25■■■■□ 3.39
TTC3-225ENST00000540756 MBD5Q9P267 1494 aa36.24■■■■□ 3.39
TTC3-225ENST00000540756 MAPKBP1O60336 1514 aa36.21■■■■□ 3.39
TTC3-225ENST00000540756 SYCP2Q9BX26 1530 aa36.19■■■■□ 3.38
TTC3-225ENST00000540756 CLSPNQ9HAW4 1339 aa36.18■■■■□ 3.38
TTC3-225ENST00000540756 ADGBQ8N7X0 1667 aa36.17■■■■□ 3.38
TTC3-225ENST00000540756 NCOA1Q15788 1441 aa36.17■■■■□ 3.38
TTC3-225ENST00000540756 ARHGEF5Q12774 1597 aa36.16■■■■□ 3.38
TTC3-225ENST00000540756 ABCA9Q8IUA7 1624 aa36.15■■■■□ 3.38
TTC3-225ENST00000540756 C9orf84Q5VXU9 1444 aa36.13■■■■□ 3.37
TTC3-225ENST00000540756 ADGRL2O95490 1459 aa36.12■■■■□ 3.37
TTC3-225ENST00000540756 ARHGEF12Q9NZN5 1544 aa36.12■■■■□ 3.37
TTC3-225ENST00000540756 EFCAB2Q5VUJ9 269 aa36.12■■■■□ 3.37
TTC3-225ENST00000540756 CCDC141Q6ZP82 1450 aa36.1■■■■□ 3.37
TTC3-225ENST00000540756 SHANK2Q9UPX8 1470 aa36.1■■■■□ 3.37
TTC3-225ENST00000540756 TSPY4P0CV99 314 aa36.09■■■■□ 3.37
TTC3-225ENST00000540756 TSPY10P0CW01 314 aa36.09■■■■□ 3.37
TTC3-225ENST00000540756 ANKRD30AQ9BXX3 1397 aa36.07■■■■□ 3.36
TTC3-225ENST00000540756 KIAA1107Q9UPP5 1409 aa36.05■■■■□ 3.36
TTC3-225ENST00000540756 TRIM52Q96A61 297 aa36.04■■■■□ 3.36
TTC3-225ENST00000540756 ARAP3Q8WWN8 1544 aa36.03■■■■□ 3.36
TTC3-225ENST00000540756 PLEKHH2Q8IVE3 1493 aa36.03■■■■□ 3.36
TTC3-225ENST00000540756 ABCC1P33527 1531 aa36.02■■■■□ 3.36
TTC3-225ENST00000540756 RSPH4AQ5TD94 716 aa36.01■■■■□ 3.36
TTC3-225ENST00000540756 FANCAO15360 1455 aa35.99■■■■□ 3.35
TTC3-225ENST00000540756 SIN3AQ96ST3 1273 aa35.97■■■■□ 3.35
TTC3-225ENST00000540756 TRAPPC8Q9Y2L5 1435 aa35.96■■■■□ 3.35
TTC3-225ENST00000540756 DENND4BO75064 1496 aaPredicted RBP35.94■■■■□ 3.34
TTC3-225ENST00000540756 KIF15Q9NS87 1388 aa35.93■■■■□ 3.34
TTC3-225ENST00000540756 ANKRD50Q9ULJ7 1429 aa35.93■■■■□ 3.34
TTC3-225ENST00000540756 CD109Q6YHK3 1445 aa35.91■■■■□ 3.34
TTC3-225ENST00000540756 MAST1Q9Y2H9 1570 aa35.9■■■■□ 3.34
TTC3-225ENST00000540756 AFAP1Q8N556 730 aa35.89■■■■□ 3.34
TTC3-225ENST00000540756 NEUROD1Q13562 356 aa35.88■■■■□ 3.33
TTC3-225ENST00000540756 MPHOSPH9Q99550 1183 aa35.88■■■■□ 3.33
TTC3-225ENST00000540756 ADGRL1O94910 1474 aa35.83■■■■□ 3.33
TTC3-225ENST00000540756 FOXD1Q16676 465 aa35.81■■■■□ 3.32
TTC3-225ENST00000540756 SCAPERQ9BY12 1400 aa35.81■■■■□ 3.32
TTC3-225ENST00000540756 PLXNC1O60486 1568 aa35.78■■■■□ 3.32
TTC3-225ENST00000540756 PZPP20742 1482 aa35.77■■■■□ 3.32
TTC3-225ENST00000540756 SLC4A1APQ9BWU0 796 aaKnown RBP35.75■■■■□ 3.31
TTC3-225ENST00000540756 SPAG9O60271 1321 aaKnown RBP35.75■■■■□ 3.31
TTC3-225ENST00000540756 ACIN1Q9UKV3 1341 aaKnown RBP35.71■■■■□ 3.31
TTC3-225ENST00000540756 MAP3K4Q9Y6R4 1608 aa35.71■■■■□ 3.31
TTC3-225ENST00000540756 ZFYVE16Q7Z3T8 1539 aa35.71■■■■□ 3.31
TTC3-225ENST00000540756 FAM69CQ0P6D2 419 aa35.68■■■■□ 3.3
TTC3-225ENST00000540756 NUP155O75694 1391 aa35.68■■■■□ 3.3
TTC3-225ENST00000540756 GLI2P10070 1586 aa35.67■■■■□ 3.3
TTC3-225ENST00000540756 DIP2BQ9P265 1576 aa35.67■■■■□ 3.3
TTC3-225ENST00000540756 CFAP74Q9C0B2 1584 aa35.66■■■■□ 3.3
TTC3-225ENST00000540756 RTEL1-TNFRSF6BF6WH68 1400 aa35.65■■■■□ 3.3
TTC3-225ENST00000540756 DUOX2Q9NRD8 1548 aa35.65■■■■□ 3.3
TTC3-225ENST00000540756 INO80Q9ULG1 1556 aaPredicted RBP35.63■■■■□ 3.29
TTC3-225ENST00000540756 ATP7AQ04656 1500 aa35.62■■■■□ 3.29
TTC3-225ENST00000540756 MYT1LQ9UL68 1186 aa35.59■■■■□ 3.29
TTC3-225ENST00000540756 ANKRD30BQ9BXX2 1392 aa35.58■■■■□ 3.29
TTC3-225ENST00000540756 KDM5DQ9BY66 1539 aa35.58■■■■□ 3.29
TTC3-225ENST00000540756 PKD2Q13563 968 aa35.57■■■■□ 3.29
TTC3-225ENST00000540756 ZNF518AQ6AHZ1 1483 aa35.57■■■■□ 3.29
TTC3-225ENST00000540756 NEO1Q92859 1461 aa35.57■■■■□ 3.29
TTC3-225ENST00000540756 POGZQ7Z3K3 1410 aa35.56■■■■□ 3.28
TTC3-225ENST00000540756 ERBINQ96RT1 1412 aa35.56■■■■□ 3.28
TTC3-225ENST00000540756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.55■■■■□ 3.285e-7■■■□□ 14.6
TTC3-225ENST00000540756 TSPOAP1O95153 1857 aa35.54■■■■□ 3.28
TTC3-225ENST00000540756 KIDINS220Q9ULH0 1771 aa35.54■■■■□ 3.28
TTC3-225ENST00000540756 UNC13BO14795 1591 aa35.53■■■■□ 3.28
TTC3-225ENST00000540756 RAPGEF3O95398 923 aa35.52■■■■□ 3.28
TTC3-225ENST00000540756 TIMELESSQ9UNS1 1208 aa35.52■■■■□ 3.28
TTC3-225ENST00000540756 TONSLQ96HA7 1378 aa35.51■■■■□ 3.28
TTC3-225ENST00000540756 FAM135AQ9P2D6 1515 aa35.5■■■■□ 3.27
TTC3-225ENST00000540756 KDM5CP41229 1560 aa35.5■■■■□ 3.27
TTC3-225ENST00000540756 PPRC1Q5VV67 1664 aaKnown RBP35.47■■■■□ 3.27
TTC3-225ENST00000540756 KIF13AQ9H1H9 1805 aa35.45■■■■□ 3.27
TTC3-225ENST00000540756 PPP1R15AO75807 674 aaPredicted RBP35.45■■■■□ 3.27
TTC3-225ENST00000540756 ZNF316A6NFI3 1004 aaPredicted RBP35.43■■■■□ 3.26
TTC3-225ENST00000540756 MAGI2Q86UL8 1455 aa35.41■■■■□ 3.26
TTC3-225ENST00000540756 RPRD2Q5VT52 1461 aaKnown RBP35.4■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms