RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 NAIPQ13075 1403 aa25.11■■□□□ 1.61
PCDHB17P-201ENST00000539533 RRP7BPQ9NSQ0 103 aa25.1■■□□□ 1.61
PCDHB17P-201ENST00000539533 DAPK1P53355 1430 aa25.1■■□□□ 1.61
PCDHB17P-201ENST00000539533 KCNH8Q96L42 1107 aa25.1■■□□□ 1.61
PCDHB17P-201ENST00000539533 ABCC5O15440 1437 aa25.09■■□□□ 1.61
PCDHB17P-201ENST00000539533 DIEXFQ68CQ4 756 aaKnown RBP25.08■■□□□ 1.61
PCDHB17P-201ENST00000539533 DNMT1P26358 1616 aaKnown RBP25.07■■□□□ 1.6
PCDHB17P-201ENST00000539533 CLSPNQ9HAW4 1339 aa25.07■■□□□ 1.6
PCDHB17P-201ENST00000539533 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.05■■□□□ 1.6
PCDHB17P-201ENST00000539533 NEUROD1Q13562 356 aa25.03■■□□□ 1.6
PCDHB17P-201ENST00000539533 TTC37Q6PGP7 1564 aa25.03■■□□□ 1.6
PCDHB17P-201ENST00000539533 CDC42BPBQ9Y5S2 1711 aa25■■□□□ 1.59
PCDHB17P-201ENST00000539533 AKNAQ7Z591 1439 aa24.99■■□□□ 1.59
PCDHB17P-201ENST00000539533 PREX2Q70Z35 1606 aa24.99■■□□□ 1.59
PCDHB17P-201ENST00000539533 MAPKBP1O60336 1514 aa24.98■■□□□ 1.59
PCDHB17P-201ENST00000539533 GCC2Q8IWJ2 1684 aa24.97■■□□□ 1.59
PCDHB17P-201ENST00000539533 ROCK1Q13464 1354 aa24.96■■□□□ 1.59
PCDHB17P-201ENST00000539533 MYT1Q01538 1121 aa24.96■■□□□ 1.59
PCDHB17P-201ENST00000539533 KDM6BO15054 1643 aa24.94■■□□□ 1.58
PCDHB17P-201ENST00000539533 HNRNPMP52272 730 aaKnown RBP eCLIP24.94■■□□□ 1.58
PCDHB17P-201ENST00000539533 SAMD9LQ8IVG5 1584 aa24.93■■□□□ 1.58
PCDHB17P-201ENST00000539533 ARHGAP5Q13017 1502 aa24.92■■□□□ 1.58
PCDHB17P-201ENST00000539533 CENPBP07199 599 aaPredicted RBP24.92■■□□□ 1.58
PCDHB17P-201ENST00000539533 WDR7Q9Y4E6 1490 aa24.92■■□□□ 1.58
PCDHB17P-201ENST00000539533 MYO5CQ9NQX4 1742 aa24.91■■□□□ 1.58
PCDHB17P-201ENST00000539533 CROCC2H7BZ55 1655 aa24.91■■□□□ 1.58
PCDHB17P-201ENST00000539533 MBD5Q9P267 1494 aa24.89■■□□□ 1.58
PCDHB17P-201ENST00000539533 NCOA1Q15788 1441 aa24.89■■□□□ 1.57
PCDHB17P-201ENST00000539533 NPM1P06748 294 aaKnown RBP eCLIP24.88■■□□□ 1.57
PCDHB17P-201ENST00000539533 ASXL2Q76L83 1435 aa24.88■■□□□ 1.57
PCDHB17P-201ENST00000539533 PLCH2O75038 1416 aa24.87■■□□□ 1.57
PCDHB17P-201ENST00000539533 ADGBQ8N7X0 1667 aa24.85■■□□□ 1.57
PCDHB17P-201ENST00000539533 TRIM52Q96A61 297 aa24.85■■□□□ 1.57
PCDHB17P-201ENST00000539533 ADGRL2O95490 1459 aa24.85■■□□□ 1.57
PCDHB17P-201ENST00000539533 TSPY4P0CV99 314 aa24.85■■□□□ 1.57
PCDHB17P-201ENST00000539533 TSPY10P0CW01 314 aa24.85■■□□□ 1.57
PCDHB17P-201ENST00000539533 ARHGEF5Q12774 1597 aa24.84■■□□□ 1.57
PCDHB17P-201ENST00000539533 SIN3AQ96ST3 1273 aa24.83■■□□□ 1.57
PCDHB17P-201ENST00000539533 GTF3C3Q9Y5Q9 886 aa24.83■■□□□ 1.57
PCDHB17P-201ENST00000539533 C9orf84Q5VXU9 1444 aa24.83■■□□□ 1.57
PCDHB17P-201ENST00000539533 ANKRD30AQ9BXX3 1397 aa24.83■■□□□ 1.56
PCDHB17P-201ENST00000539533 SHANK2Q9UPX8 1470 aa24.82■■□□□ 1.56
PCDHB17P-201ENST00000539533 SYCP2Q9BX26 1530 aa24.82■■□□□ 1.56
PCDHB17P-201ENST00000539533 ZNF316A6NFI3 1004 aaPredicted RBP24.81■■□□□ 1.56
PCDHB17P-201ENST00000539533 EFCAB2Q5VUJ9 269 aa24.81■■□□□ 1.56
PCDHB17P-201ENST00000539533 CYB5RLQ6IPT4 315 aa24.81■■□□□ 1.56
PCDHB17P-201ENST00000539533 CCDC141Q6ZP82 1450 aa24.8■■□□□ 1.56
PCDHB17P-201ENST00000539533 RSPH4AQ5TD94 716 aa24.79■■□□□ 1.56
PCDHB17P-201ENST00000539533 RIMBP3CA6NJZ7 1639 aa24.78■■□□□ 1.56
PCDHB17P-201ENST00000539533 RIMBP3BA6NNM3 1639 aa24.78■■□□□ 1.56
PCDHB17P-201ENST00000539533 RIMBP3Q9UFD9 1639 aa24.78■■□□□ 1.56
PCDHB17P-201ENST00000539533 ARHGEF12Q9NZN5 1544 aa24.77■■□□□ 1.56
PCDHB17P-201ENST00000539533 KIAA1107Q9UPP5 1409 aa24.77■■□□□ 1.56
PCDHB17P-201ENST00000539533 ABCA9Q8IUA7 1624 aa24.76■■□□□ 1.55
PCDHB17P-201ENST00000539533 PLEKHH2Q8IVE3 1493 aa24.76■■□□□ 1.55
PCDHB17P-201ENST00000539533 DENND4BO75064 1496 aaPredicted RBP24.74■■□□□ 1.55
PCDHB17P-201ENST00000539533 MPHOSPH9Q99550 1183 aa24.74■■□□□ 1.55
PCDHB17P-201ENST00000539533 ANKRD50Q9ULJ7 1429 aa24.72■■□□□ 1.55
PCDHB17P-201ENST00000539533 ARAP3Q8WWN8 1544 aa24.72■■□□□ 1.55
PCDHB17P-201ENST00000539533 KIF15Q9NS87 1388 aa24.71■■□□□ 1.55
PCDHB17P-201ENST00000539533 ABCC1P33527 1531 aa24.69■■□□□ 1.54
PCDHB17P-201ENST00000539533 FANCAO15360 1455 aa24.67■■□□□ 1.54
PCDHB17P-201ENST00000539533 TRAPPC8Q9Y2L5 1435 aa24.67■■□□□ 1.54
PCDHB17P-201ENST00000539533 FOXD1Q16676 465 aa24.66■■□□□ 1.54
PCDHB17P-201ENST00000539533 MAST1Q9Y2H9 1570 aa24.65■■□□□ 1.54
PCDHB17P-201ENST00000539533 SLC4A1APQ9BWU0 796 aaKnown RBP24.64■■□□□ 1.54
PCDHB17P-201ENST00000539533 AFAP1Q8N556 730 aa24.62■■□□□ 1.53
PCDHB17P-201ENST00000539533 PZPP20742 1482 aa24.61■■□□□ 1.53
PCDHB17P-201ENST00000539533 CD109Q6YHK3 1445 aa24.6■■□□□ 1.53
PCDHB17P-201ENST00000539533 TIMELESSQ9UNS1 1208 aa24.59■■□□□ 1.53
PCDHB17P-201ENST00000539533 ADGRL1O94910 1474 aa24.57■■□□□ 1.52
PCDHB17P-201ENST00000539533 PLXNC1O60486 1568 aa24.56■■□□□ 1.52
PCDHB17P-201ENST00000539533 NUP155O75694 1391 aa24.56■■□□□ 1.52
PCDHB17P-201ENST00000539533 SCAPERQ9BY12 1400 aa24.56■■□□□ 1.52
PCDHB17P-201ENST00000539533 SPAG9O60271 1321 aaKnown RBP24.55■■□□□ 1.52
PCDHB17P-201ENST00000539533 TONSLQ96HA7 1378 aa24.54■■□□□ 1.52
PCDHB17P-201ENST00000539533 ANKRD30BQ9BXX2 1392 aa24.53■■□□□ 1.52
PCDHB17P-201ENST00000539533 PPP1R15AO75807 674 aaPredicted RBP24.51■■□□□ 1.51
PCDHB17P-201ENST00000539533 PKD2Q13563 968 aa24.51■■□□□ 1.51
PCDHB17P-201ENST00000539533 DUOX2Q9NRD8 1548 aa24.49■■□□□ 1.51
PCDHB17P-201ENST00000539533 RTEL1-TNFRSF6BF6WH68 1400 aa24.49■■□□□ 1.51
PCDHB17P-201ENST00000539533 MIER1Q8N108 512 aa24.49■■□□□ 1.51
PCDHB17P-201ENST00000539533 YTHDC1Q96MU7 727 aaKnown RBP24.49■■□□□ 1.51
PCDHB17P-201ENST00000539533 ZFYVE16Q7Z3T8 1539 aa24.48■■□□□ 1.51
PCDHB17P-201ENST00000539533 KDM5DQ9BY66 1539 aa24.48■■□□□ 1.51
PCDHB17P-201ENST00000539533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.44■■□□□ 1.5
PCDHB17P-201ENST00000539533 MYT1LQ9UL68 1186 aa24.44■■□□□ 1.5
PCDHB17P-201ENST00000539533 ERBINQ96RT1 1412 aa24.43■■□□□ 1.5
PCDHB17P-201ENST00000539533 ATP7AQ04656 1500 aa24.43■■□□□ 1.5
PCDHB17P-201ENST00000539533 CFAP74Q9C0B2 1584 aa24.43■■□□□ 1.5
PCDHB17P-201ENST00000539533 INO80Q9ULG1 1556 aaPredicted RBP24.42■■□□□ 1.5
PCDHB17P-201ENST00000539533 UNC13BO14795 1591 aa24.41■■□□□ 1.5
PCDHB17P-201ENST00000539533 FAM135AQ9P2D6 1515 aa24.41■■□□□ 1.5
PCDHB17P-201ENST00000539533 MAP3K4Q9Y6R4 1608 aa24.41■■□□□ 1.5
PCDHB17P-201ENST00000539533 FAM69CQ0P6D2 419 aa24.4■■□□□ 1.5
PCDHB17P-201ENST00000539533 RPRD2Q5VT52 1461 aaKnown RBP24.4■■□□□ 1.5
PCDHB17P-201ENST00000539533 ZNF518AQ6AHZ1 1483 aa24.4■■□□□ 1.5
PCDHB17P-201ENST00000539533 GLI2P10070 1586 aa24.39■■□□□ 1.5
PCDHB17P-201ENST00000539533 L3MBTL2Q969R5 705 aa24.37■■□□□ 1.49
PCDHB17P-201ENST00000539533 NEO1Q92859 1461 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms