RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 EFCAB2Q5VUJ9 269 aa36.02■■■■□ 3.36
SCARB1-206ENST00000539320 ZFYVE16Q7Z3T8 1539 aa36.02■■■■□ 3.36
SCARB1-206ENST00000539320 BCORL1Q5H9F3 1711 aa36■■■■□ 3.35
SCARB1-206ENST00000539320 MAGI2Q86UL8 1455 aa36■■■■□ 3.35
SCARB1-206ENST00000539320 ARHGAP5Q13017 1502 aa36■■■■□ 3.35
SCARB1-206ENST00000539320 ARID4BQ4LE39 1312 aaPredicted RBP35.98■■■■□ 3.35
SCARB1-206ENST00000539320 YEATS2Q9ULM3 1422 aa35.97■■■■□ 3.35
SCARB1-206ENST00000539320 HECW2Q9P2P5 1572 aa35.96■■■■□ 3.35
SCARB1-206ENST00000539320 PREX2Q70Z35 1606 aa35.92■■■■□ 3.34
SCARB1-206ENST00000539320 MADDQ8WXG6 1647 aa35.91■■■■□ 3.34
SCARB1-206ENST00000539320 PTPRMP28827 1452 aa35.91■■■■□ 3.34
SCARB1-206ENST00000539320 CDC42BPBQ9Y5S2 1711 aa35.88■■■■□ 3.34
SCARB1-206ENST00000539320 ZNF518AQ6AHZ1 1483 aa35.87■■■■□ 3.33
SCARB1-206ENST00000539320 KDM5CP41229 1560 aa35.84■■■■□ 3.33
SCARB1-206ENST00000539320 SIGLEC1Q9BZZ2 1709 aa35.83■■■■□ 3.33
SCARB1-206ENST00000539320 CEP162Q5TB80 1403 aa35.83■■■■□ 3.33
SCARB1-206ENST00000539320 ABCC1P33527 1531 aa35.8■■■■□ 3.32
SCARB1-206ENST00000539320 CDC42BPAQ5VT25 1732 aa35.8■■■■□ 3.32
SCARB1-206ENST00000539320 C9orf84Q5VXU9 1444 aa35.78■■■■□ 3.32
SCARB1-206ENST00000539320 ATP10AO60312 1499 aa35.78■■■■□ 3.32
SCARB1-206ENST00000539320 RIMS1Q86UR5 1692 aaKnown RBP35.78■■■■□ 3.32
SCARB1-206ENST00000539320 ITSN2Q9NZM3 1697 aa35.74■■■■□ 3.31
SCARB1-206ENST00000539320 AFAP1Q8N556 730 aa35.73■■■■□ 3.31
SCARB1-206ENST00000539320 ARHGEF12Q9NZN5 1544 aa35.71■■■■□ 3.31
SCARB1-206ENST00000539320 TRAPPC8Q9Y2L5 1435 aa35.69■■■■□ 3.3
SCARB1-206ENST00000539320 MTUS2Q5JR59 1369 aa35.68■■■■□ 3.3
SCARB1-206ENST00000539320 DIP2CQ9Y2E4 1556 aa35.68■■■■□ 3.3
SCARB1-206ENST00000539320 GPATCH8Q9UKJ3 1502 aaKnown RBP35.67■■■■□ 3.3
SCARB1-206ENST00000539320 MLH3Q9UHC1 1453 aa35.67■■■■□ 3.3
SCARB1-206ENST00000539320 MLECQ14165 292 aa35.65■■■■□ 3.3
SCARB1-206ENST00000539320 FER1L4A9Z1Z3 1794 aa35.65■■■■□ 3.3
SCARB1-206ENST00000539320 MYT1LQ9UL68 1186 aa35.64■■■■□ 3.3
SCARB1-206ENST00000539320 SAMD9LQ8IVG5 1584 aa35.64■■■■□ 3.3
SCARB1-206ENST00000539320 EHBP1L1Q8N3D4 1523 aa35.63■■■■□ 3.29
SCARB1-206ENST00000539320 ABCA6Q8N139 1617 aa35.63■■■■□ 3.29
SCARB1-206ENST00000539320 REREQ9P2R6 1566 aa35.62■■■■□ 3.29
SCARB1-206ENST00000539320 SYCP2Q9BX26 1530 aa35.59■■■■□ 3.29
SCARB1-206ENST00000539320 CCNB3Q8WWL7 1395 aa35.59■■■■□ 3.29
SCARB1-206ENST00000539320 ZNF777Q9ULD5 760 aaPredicted RBP35.58■■■■□ 3.29
SCARB1-206ENST00000539320 PLEKHH2Q8IVE3 1493 aa35.54■■■■□ 3.28
SCARB1-206ENST00000539320 LMTK3Q96Q04 1460 aa35.54■■■■□ 3.28
SCARB1-206ENST00000539320 KIDINS220Q9ULH0 1771 aa35.53■■■■□ 3.28
SCARB1-206ENST00000539320 TIAM1Q13009 1591 aa35.52■■■■□ 3.28
SCARB1-206ENST00000539320 CFDP1Q9UEE9 299 aaPredicted RBP35.52■■■■□ 3.28
SCARB1-206ENST00000539320 KIAA1107Q9UPP5 1409 aa35.5■■■■□ 3.27
SCARB1-206ENST00000539320 PLPPR3Q6T4P5 718 aa35.5■■■■□ 3.27
SCARB1-206ENST00000539320 LOC105371045A0A1W2PR82 267 aa35.49■■■■□ 3.27
SCARB1-206ENST00000539320 AGLP35573 1532 aa35.48■■■■□ 3.27
SCARB1-206ENST00000539320 VPS8Q8N3P4 1428 aa35.45■■■■□ 3.27
SCARB1-206ENST00000539320 HNRNPMP52272 730 aaKnown RBP eCLIP35.43■■■■□ 3.263e-9■■■■■ 27.7
SCARB1-206ENST00000539320 SPAG9O60271 1321 aaKnown RBP35.42■■■■□ 3.26
SCARB1-206ENST00000539320 ATP7AQ04656 1500 aa35.4■■■■□ 3.26
SCARB1-206ENST00000539320 INO80Q9ULG1 1556 aaPredicted RBP35.39■■■■□ 3.26
SCARB1-206ENST00000539320 SUPT6HQ7KZ85 1726 aaKnown RBP35.39■■■■□ 3.26
SCARB1-206ENST00000539320 NCOA2Q15596 1464 aa35.37■■■■□ 3.25
SCARB1-206ENST00000539320 ZNF644Q9H582 1327 aaPredicted RBP35.31■■■■□ 3.24
SCARB1-206ENST00000539320 MBD5Q9P267 1494 aa35.29■■■■□ 3.24
SCARB1-206ENST00000539320 CEBPAP49715 358 aaPredicted RBP35.29■■■■□ 3.24
SCARB1-206ENST00000539320 PREX1Q8TCU6 1659 aa35.29■■■■□ 3.24
SCARB1-206ENST00000539320 PLXNC1O60486 1568 aa35.29■■■■□ 3.24
SCARB1-206ENST00000539320 HSPA2P54652 639 aa35.28■■■■□ 3.24
SCARB1-206ENST00000539320 A2MP01023 1474 aa35.26■■■■□ 3.23
SCARB1-206ENST00000539320 LRRC9Q6ZRR7 1453 aa35.26■■■■□ 3.23
SCARB1-206ENST00000539320 CNTLNQ9NXG0 1405 aa35.25■■■■□ 3.23
SCARB1-206ENST00000539320 ESF1Q9H501 851 aaKnown RBP35.25■■■■□ 3.23
SCARB1-206ENST00000539320 C3P01024 1663 aa35.24■■■■□ 3.23
SCARB1-206ENST00000539320 CAMSAP2Q08AD1 1489 aa35.23■■■■□ 3.23
SCARB1-206ENST00000539320 ILDR1Q86SU0 546 aaPredicted RBP35.22■■■■□ 3.23
SCARB1-206ENST00000539320 MAP3K1Q13233 1512 aa35.22■■■■□ 3.23
SCARB1-206ENST00000539320 ADGBQ8N7X0 1667 aa35.21■■■■□ 3.23
SCARB1-206ENST00000539320 CCDC141Q6ZP82 1450 aa35.19■■■■□ 3.22
SCARB1-206ENST00000539320 RTEL1-TNFRSF6BF6WH68 1400 aa35.18■■■■□ 3.22
SCARB1-206ENST00000539320 UHRF1BP1Q6BDS2 1440 aa35.18■■■■□ 3.22
SCARB1-206ENST00000539320 SETD1BQ9UPS6 1966 aaKnown RBP35.18■■■■□ 3.22
SCARB1-206ENST00000539320 MROH2AA6NES4 1674 aa35.14■■■■□ 3.22
SCARB1-206ENST00000539320 ARHGEF5Q12774 1597 aa35.1■■■■□ 3.21
SCARB1-206ENST00000539320 KANK4Q5T7N3 995 aaPredicted RBP35.08■■■■□ 3.21
SCARB1-206ENST00000539320 RSPH4AQ5TD94 716 aa35.07■■■■□ 3.2
SCARB1-206ENST00000539320 CLTCQ00610 1675 aaKnown RBP35.05■■■■□ 3.2
SCARB1-206ENST00000539320 DHX29Q7Z478 1369 aaKnown RBP35.03■■■■□ 3.2
SCARB1-206ENST00000539320 NPATQ14207 1427 aa35.03■■■■□ 3.2
SCARB1-206ENST00000539320 ZMYM3Q14202 1370 aa35.02■■■■□ 3.2
SCARB1-206ENST00000539320 GGT6Q6P531 493 aa35.02■■■■□ 3.2
SCARB1-206ENST00000539320 MYOM3Q5VTT5 1437 aa35.01■■■■□ 3.2
SCARB1-206ENST00000539320 MIA2Q96PC5 1412 aa34.98■■■■□ 3.19
SCARB1-206ENST00000539320 PPP6R1Q9UPN7 881 aa34.96■■■■□ 3.19
SCARB1-206ENST00000539320 APLP2Q06481 763 aa34.94■■■■□ 3.18
SCARB1-206ENST00000539320 STRCQ7RTU9 1775 aa34.94■■■■□ 3.18
SCARB1-206ENST00000539320 TSPY4P0CV99 314 aa34.93■■■■□ 3.18
SCARB1-206ENST00000539320 TSPY10P0CW01 314 aa34.93■■■■□ 3.18
SCARB1-206ENST00000539320 MAST1Q9Y2H9 1570 aa34.92■■■■□ 3.18
SCARB1-206ENST00000539320 FBXO41Q8TF61 875 aa34.9■■■■□ 3.18
SCARB1-206ENST00000539320 FAM135AQ9P2D6 1515 aa34.9■■■■□ 3.18
SCARB1-206ENST00000539320 PTPRKQ15262 1439 aa34.89■■■■□ 3.18
SCARB1-206ENST00000539320 KIF3BO15066 747 aa34.88■■■■□ 3.17
SCARB1-206ENST00000539320 MYO3AQ8NEV4 1616 aa34.87■■■■□ 3.17
SCARB1-206ENST00000539320 KDM5DQ9BY66 1539 aa34.86■■■■□ 3.17
SCARB1-206ENST00000539320 DMRT2Q9Y5R5 561 aa34.85■■■■□ 3.17
SCARB1-206ENST00000539320 ZNF142P52746 1687 aaPredicted RBP34.84■■■■□ 3.17
SCARB1-206ENST00000539320 NCOA1Q15788 1441 aa34.83■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms