RNA–Protein interactions for RNA: ENST00000539004.5

FAM60A-205, Transcript of Protein FAM60A, humanhuman

TSL 5

Gene FAM60A, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-205ENST00000539004 KCNV2Q8TDN2 545 aa9.1□□□□□ -0.95
FAM60A-205ENST00000539004 OCEL1Q9H607 264 aa9.1□□□□□ -0.95
FAM60A-205ENST00000539004 CADPS2Q86UW7 1296 aa9.09□□□□□ -0.95
FAM60A-205ENST00000539004 MARVELD3Q96A59 401 aa9.09□□□□□ -0.95
FAM60A-205ENST00000539004 LMOD2Q6P5Q4 547 aa9.08□□□□□ -0.96
FAM60A-205ENST00000539004 IFNL1Q8IU54 200 aa9.08□□□□□ -0.96
FAM60A-205ENST00000539004 EMP3P54852 163 aa9.07□□□□□ -0.96
FAM60A-205ENST00000539004 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.07□□□□□ -0.962e-6■■■□□ 18.9
FAM60A-205ENST00000539004 ZNF467Q7Z7K2 595 aaPredicted RBP9.04□□□□□ -0.96
FAM60A-205ENST00000539004 ARXQ96QS3 562 aa9.02□□□□□ -0.97
FAM60A-205ENST00000539004 PDAP1Q13442 181 aaKnown RBP9.01□□□□□ -0.97
FAM60A-205ENST00000539004 C14orf37Q86TY3 774 aa9.01□□□□□ -0.97
FAM60A-205ENST00000539004 KRTAP3-3Q9BYR6 98 aa9.01□□□□□ -0.97
FAM60A-205ENST00000539004 KRTAP3-2Q9BYR7 98 aa9.01□□□□□ -0.97
FAM60A-205ENST00000539004 C3orf67Q6ZVT6 689 aa9□□□□□ -0.97
FAM60A-205ENST00000539004 HS3ST6Q96QI5 342 aa9□□□□□ -0.97
FAM60A-205ENST00000539004 PCDHB8Q9UN66 801 aa8.98□□□□□ -0.97
FAM60A-205ENST00000539004 BRPF1P55201 1214 aaPredicted RBP8.97□□□□□ -0.97
FAM60A-205ENST00000539004 L3MBTL3Q96JM7 780 aaPredicted RBP8.97□□□□□ -0.97
FAM60A-205ENST00000539004 MFRPQ9BY79 579 aa8.97□□□□□ -0.97
FAM60A-205ENST00000539004 FAM205CA6NFA0 338 aa8.96□□□□□ -0.98
FAM60A-205ENST00000539004 PSEN1P49768 467 aa8.95□□□□□ -0.98
FAM60A-205ENST00000539004 ARHGEF1Q92888 912 aaKnown RBP8.95□□□□□ -0.98
FAM60A-205ENST00000539004 ZC3H15Q8WU90 426 aaKnown RBP8.93□□□□□ -0.98
FAM60A-205ENST00000539004 E2F4Q16254 413 aa8.92□□□□□ -0.98
FAM60A-205ENST00000539004 PPP1R37O75864 691 aa8.91□□□□□ -0.98
FAM60A-205ENST00000539004 POTEB3A0JP26 581 aa8.9□□□□□ -0.98
FAM60A-205ENST00000539004 NEUROD2Q15784 382 aa8.9□□□□□ -0.98
FAM60A-205ENST00000539004 POTEBQ6S5H4 581 aa8.9□□□□□ -0.98
FAM60A-205ENST00000539004 SEMA3EO15041 775 aa8.89□□□□□ -0.99
FAM60A-205ENST00000539004 RNF166Q96A37 237 aaPredicted RBP8.89□□□□□ -0.99
FAM60A-205ENST00000539004 TESPA1A2RU30 521 aaPredicted RBP8.88□□□□□ -0.99
FAM60A-205ENST00000539004 PDCD7Q8N8D1 485 aaKnown RBP8.88□□□□□ -0.99
FAM60A-205ENST00000539004 SLC24A3Q9HC58 644 aa8.88□□□□□ -0.99
FAM60A-205ENST00000539004 NLRP6P59044 892 aa8.87□□□□□ -0.99
FAM60A-205ENST00000539004 GOLGA2Q08379 1002 aa8.87□□□□□ -0.99
FAM60A-205ENST00000539004 HOMEZQ8IX15 550 aa8.86□□□□□ -0.99
FAM60A-205ENST00000539004 EFCAB3Q8N7B9 438 aa8.86□□□□□ -0.99
FAM60A-205ENST00000539004 FBXO22Q8NEZ5 403 aa8.86□□□□□ -0.99
FAM60A-205ENST00000539004 MKRN3Q13064 507 aaKnown RBP8.85□□□□□ -0.99
FAM60A-205ENST00000539004 PHF8Q9UPP1 1060 aa8.84□□□□□ -0.99
FAM60A-205ENST00000539004 SOX12O15370 315 aa8.83□□□□□ -1
FAM60A-205ENST00000539004 CABP2Q9NPB3 220 aa8.83□□□□□ -1
FAM60A-205ENST00000539004 DAXXQ9UER7 740 aaPredicted RBP8.83□□□□□ -1
FAM60A-205ENST00000539004 SMYD5Q6GMV2 418 aa8.81□□□□□ -1
FAM60A-205ENST00000539004 HOXB1P14653 301 aaPredicted RBP8.8□□□□□ -1
FAM60A-205ENST00000539004 PTGER2P43116 358 aa8.8□□□□□ -1
FAM60A-205ENST00000539004 LARP6Q9BRS8 491 aaKnown RBP8.8□□□□□ -1
FAM60A-205ENST00000539004 MYT1LQ9UL68 1186 aa8.8□□□□□ -1
FAM60A-205ENST00000539004 NCKAP5LQ9HCH0 1330 aa8.8□□□□□ -1
FAM60A-205ENST00000539004 ZMYND10O75800 440 aa8.79□□□□□ -1
FAM60A-205ENST00000539004 ZNF710Q8N1W2 664 aa8.78□□□□□ -1
FAM60A-205ENST00000539004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.78□□□□□ -11e-6■■□□□ 14.2
FAM60A-205ENST00000539004 ERBB3P21860 1342 aa8.78□□□□□ -1
FAM60A-205ENST00000539004 PDE4AP27815 886 aa8.77□□□□□ -1.01
FAM60A-205ENST00000539004 DOK7Q18PE1 504 aa8.77□□□□□ -1.01
FAM60A-205ENST00000539004 G3V3G9 751 aa8.76□□□□□ -1.01
FAM60A-205ENST00000539004 SUPT5HO00267 1087 aaKnown RBP8.76□□□□□ -1.01
FAM60A-205ENST00000539004 MFSD10Q14728 455 aa8.76□□□□□ -1.01
FAM60A-205ENST00000539004 RIMBP2O15034 1052 aa8.74□□□□□ -1.01
FAM60A-205ENST00000539004 HOXB3P14651 431 aaPredicted RBP8.74□□□□□ -1.01
FAM60A-205ENST00000539004 BARGINQ6ZT62 677 aa8.74□□□□□ -1.01
FAM60A-205ENST00000539004 DDX27Q96GQ7 796 aaKnown RBP8.73□□□□□ -1.01
FAM60A-205ENST00000539004 CRISPLD2Q9H0B8 497 aa8.73□□□□□ -1.01
FAM60A-205ENST00000539004 ARIH1Q9Y4X5 557 aaPredicted RBP8.73□□□□□ -1.01
FAM60A-205ENST00000539004 ILDR1Q86SU0 546 aaPredicted RBP8.72□□□□□ -1.01
FAM60A-205ENST00000539004 MS4A4AQ96JQ5 239 aa8.72□□□□□ -1.01
FAM60A-205ENST00000539004 CAMK2BQ13554 666 aa8.69□□□□□ -1.02
FAM60A-205ENST00000539004 AK7Q96M32 723 aa8.69□□□□□ -1.02
FAM60A-205ENST00000539004 GPIHBP1Q8IV16 184 aa8.68□□□□□ -1.02
FAM60A-205ENST00000539004 BOLA1Q9Y3E2 137 aa8.68□□□□□ -1.02
FAM60A-205ENST00000539004 VARS2Q5ST30 1063 aaKnown RBP8.67□□□□□ -1.02
FAM60A-205ENST00000539004 RBM26Q5T8P6 1007 aaKnown RBP8.67□□□□□ -1.02
FAM60A-205ENST00000539004 ZNF687Q8N1G0 1237 aa8.67□□□□□ -1.02
FAM60A-205ENST00000539004 KRI1Q8N9T8 703 aaKnown RBP8.67□□□□□ -1.02
FAM60A-205ENST00000539004 GPBP1L1Q9HC44 474 aaPredicted RBP8.67□□□□□ -1.02
FAM60A-205ENST00000539004 ZSWIM6Q9HCJ5 1215 aa8.67□□□□□ -1.02
FAM60A-205ENST00000539004 MLLT3P42568 568 aaPredicted RBP8.65□□□□□ -1.02
FAM60A-205ENST00000539004 IL27Q8NEV9 243 aa8.63□□□□□ -1.03
FAM60A-205ENST00000539004 KDM4CQ9H3R0 1056 aa8.61□□□□□ -1.03
FAM60A-205ENST00000539004 PPP1R15BQ5SWA1 713 aa8.6□□□□□ -1.03
FAM60A-205ENST00000539004 TRIM66O15016 1216 aa8.59□□□□□ -1.03
FAM60A-205ENST00000539004 DPY19L2Q6NUT2 758 aa8.59□□□□□ -1.03
FAM60A-205ENST00000539004 PDE4DQ08499 809 aa8.58□□□□□ -1.04
FAM60A-205ENST00000539004 DPYSL4O14531 572 aa8.57□□□□□ -1.04
FAM60A-205ENST00000539004 ZMYND15Q9H091 742 aa8.57□□□□□ -1.04
FAM60A-205ENST00000539004 GPHNQ9NQX3 736 aaPredicted RBP8.57□□□□□ -1.04
FAM60A-205ENST00000539004 SPDYE16A6NNV3 312 aaPredicted RBP8.55□□□□□ -1.04
FAM60A-205ENST00000539004 EMILIN3Q9NT22 766 aa8.54□□□□□ -1.04
FAM60A-205ENST00000539004 PDIA6Q15084 440 aa8.53□□□□□ -1.04
FAM60A-205ENST00000539004 RSPH6AQ9H0K4 717 aa8.53□□□□□ -1.04
FAM60A-205ENST00000539004 PLA2G2EQ9NZK7 142 aa8.53□□□□□ -1.04
FAM60A-205ENST00000539004 ANKRD13DQ6ZTN6 518 aa8.52□□□□□ -1.05
FAM60A-205ENST00000539004 DSG2Q14126 1118 aa8.51□□□□□ -1.05
FAM60A-205ENST00000539004 GPR153Q6NV75 609 aa8.51□□□□□ -1.05
FAM60A-205ENST00000539004 GPR37O15354 613 aa8.5□□□□□ -1.05
FAM60A-205ENST00000539004 UBTFP17480 764 aaKnown RBP8.5□□□□□ -1.05
FAM60A-205ENST00000539004 LSM11P83369 360 aaKnown RBP eCLIP8.49□□□□□ -1.057e-6■■□□□ 12.1
FAM60A-205ENST00000539004 FAM117AQ9C073 453 aa8.49□□□□□ -1.05
FAM60A-205ENST00000539004 ZNF316A6NFI3 1004 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms