RNA–Protein interactions for RNA: ENST00000538792.1

GCSHP4-201, Transcript of glycine cleavage system protein H pseudogene 4, humanhuman

BASIC

Gene GCSHP4, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP4-201ENST00000538792 ST18O60284 1047 aa12.2□□□□□ -0.46
GCSHP4-201ENST00000538792 HOXB3P14651 431 aaPredicted RBP12.2□□□□□ -0.46
GCSHP4-201ENST00000538792 SNPHO15079 494 aa12.19□□□□□ -0.46
GCSHP4-201ENST00000538792 TMC2Q8TDI7 906 aa12.14□□□□□ -0.47
GCSHP4-201ENST00000538792 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.14□□□□□ -0.47
GCSHP4-201ENST00000538792 SPRYD3Q8NCJ5 442 aa12.12□□□□□ -0.47
GCSHP4-201ENST00000538792 POTEMA6NI47 508 aa12.11□□□□□ -0.47
GCSHP4-201ENST00000538792 POTEGQ6S5H5 508 aa12.11□□□□□ -0.47
GCSHP4-201ENST00000538792 PAXIP1Q6ZW49 1069 aaPredicted RBP12.11□□□□□ -0.47
GCSHP4-201ENST00000538792 CADPS2Q86UW7 1296 aa12.1□□□□□ -0.47
GCSHP4-201ENST00000538792 GPHNQ9NQX3 736 aaPredicted RBP12.1□□□□□ -0.47
GCSHP4-201ENST00000538792 NCKAP5LQ9HCH0 1330 aa12.1□□□□□ -0.47
GCSHP4-201ENST00000538792 DOK7Q18PE1 504 aa12.09□□□□□ -0.47
GCSHP4-201ENST00000538792 CFAP44Q96MT7 982 aa12.09□□□□□ -0.47
GCSHP4-201ENST00000538792 CRISPLD2Q9H0B8 497 aa12.09□□□□□ -0.47
GCSHP4-201ENST00000538792 DSG2Q14126 1118 aa12.07□□□□□ -0.48
GCSHP4-201ENST00000538792 MARVELD3Q96A59 401 aa12.07□□□□□ -0.48
GCSHP4-201ENST00000538792 FOXK1P85037 733 aa12.06□□□□□ -0.48
GCSHP4-201ENST00000538792 ZNF710Q8N1W2 664 aa12.05□□□□□ -0.48
GCSHP4-201ENST00000538792 PLPP6Q8IY26 295 aa12.03□□□□□ -0.48
GCSHP4-201ENST00000538792 GPR153Q6NV75 609 aa12.02□□□□□ -0.49
GCSHP4-201ENST00000538792 RIMBP2O15034 1052 aa12.01□□□□□ -0.49
GCSHP4-201ENST00000538792 HOXB1P14653 301 aaPredicted RBP12.01□□□□□ -0.49
GCSHP4-201ENST00000538792 PDE4AP27815 886 aa12.01□□□□□ -0.49
GCSHP4-201ENST00000538792 KHSRPQ92945 711 aaKnown RBP eCLIP12□□□□□ -0.49
GCSHP4-201ENST00000538792 ARSIQ5FYB1 569 aa11.99□□□□□ -0.49
GCSHP4-201ENST00000538792 LARP6Q9BRS8 491 aaKnown RBP11.99□□□□□ -0.49
GCSHP4-201ENST00000538792 ZSWIM6Q9HCJ5 1215 aa11.99□□□□□ -0.49
GCSHP4-201ENST00000538792 SLC34A2O95436 690 aa11.98□□□□□ -0.49
GCSHP4-201ENST00000538792 EMP3P54852 163 aa11.98□□□□□ -0.49
GCSHP4-201ENST00000538792 PPP1R15BQ5SWA1 713 aa11.98□□□□□ -0.49
GCSHP4-201ENST00000538792 POTEB3A0JP26 581 aa11.96□□□□□ -0.49
GCSHP4-201ENST00000538792 POTEBQ6S5H4 581 aa11.96□□□□□ -0.49
GCSHP4-201ENST00000538792 MFSD10Q14728 455 aa11.95□□□□□ -0.5
GCSHP4-201ENST00000538792 PCDHGA4Q9Y5G9 962 aa11.95□□□□□ -0.5
GCSHP4-201ENST00000538792 DDX27Q96GQ7 796 aaKnown RBP11.94□□□□□ -0.5
GCSHP4-201ENST00000538792 FAM205CA6NFA0 338 aa11.93□□□□□ -0.5
GCSHP4-201ENST00000538792 PTCD2Q8WV60 388 aaKnown RBP11.91□□□□□ -0.5
GCSHP4-201ENST00000538792 NUDT7P0C024 238 aa11.9□□□□□ -0.5
GCSHP4-201ENST00000538792 HS3ST6Q96QI5 342 aa11.9□□□□□ -0.5
GCSHP4-201ENST00000538792 TSHZ2Q9NRE2 1034 aa11.89□□□□□ -0.51
GCSHP4-201ENST00000538792 UPF1Q92900 1129 aaKnown RBP eCLIP11.88□□□□□ -0.51
GCSHP4-201ENST00000538792 CDAN1Q8IWY9 1227 aa11.87□□□□□ -0.51
GCSHP4-201ENST00000538792 OXER1Q8TDS5 423 aa11.87□□□□□ -0.51
GCSHP4-201ENST00000538792 ERBB3P21860 1342 aa11.86□□□□□ -0.51
GCSHP4-201ENST00000538792 KDM4FA0A1W2PPD8 638 aa11.86□□□□□ -0.51
GCSHP4-201ENST00000538792 PLCB2Q00722 1185 aa11.85□□□□□ -0.51
GCSHP4-201ENST00000538792 VARS2Q5ST30 1063 aaKnown RBP11.85□□□□□ -0.51
GCSHP4-201ENST00000538792 EMILIN3Q9NT22 766 aa11.85□□□□□ -0.51
GCSHP4-201ENST00000538792 ZNF316A6NFI3 1004 aaPredicted RBP11.83□□□□□ -0.52
GCSHP4-201ENST00000538792 LHX6Q9UPM6 363 aa11.82□□□□□ -0.52
GCSHP4-201ENST00000538792 PCDH10Q9P2E7 1040 aa11.81□□□□□ -0.52
GCSHP4-201ENST00000538792 CAMK2BQ13554 666 aa11.8□□□□□ -0.52
GCSHP4-201ENST00000538792 TBC1D12O60347 775 aa11.79□□□□□ -0.52
GCSHP4-201ENST00000538792 KRTAP3-3Q9BYR6 98 aa11.77□□□□□ -0.53
GCSHP4-201ENST00000538792 KRTAP3-2Q9BYR7 98 aa11.77□□□□□ -0.53
GCSHP4-201ENST00000538792 MAP3K9P80192 1104 aa11.73□□□□□ -0.53
GCSHP4-201ENST00000538792 ZNF687Q8N1G0 1237 aa11.73□□□□□ -0.53
GCSHP4-201ENST00000538792 DPYSL4O14531 572 aa11.72□□□□□ -0.53
GCSHP4-201ENST00000538792 EVI5O60447 810 aa11.72□□□□□ -0.53
GCSHP4-201ENST00000538792 WDR70Q9NW82 654 aa11.71□□□□□ -0.53
GCSHP4-201ENST00000538792 E2F4Q16254 413 aa11.7□□□□□ -0.54
GCSHP4-201ENST00000538792 ANO8Q9HCE9 1232 aaPredicted RBP11.7□□□□□ -0.54
GCSHP4-201ENST00000538792 POTEEQ6S8J3 1075 aa11.69□□□□□ -0.54
GCSHP4-201ENST00000538792 HAP1P54257 671 aaPredicted RBP11.66□□□□□ -0.54
GCSHP4-201ENST00000538792 PSDA5PKW4 1024 aaPredicted RBP11.65□□□□□ -0.54
GCSHP4-201ENST00000538792 AXIN2Q9Y2T1 843 aa11.64□□□□□ -0.55
GCSHP4-201ENST00000538792 FOSBP53539 338 aa11.63□□□□□ -0.55
GCSHP4-201ENST00000538792 ZNF454Q8N9F8 522 aa11.63□□□□□ -0.55
GCSHP4-201ENST00000538792 PPP4R3BQ5MIZ7 849 aa11.62□□□□□ -0.55
GCSHP4-201ENST00000538792 JPH4Q96JJ6 628 aa11.61□□□□□ -0.55
GCSHP4-201ENST00000538792 PLSCR2Q9NRY7 297 aa11.61□□□□□ -0.55
GCSHP4-201ENST00000538792 ARIH1Q9Y4X5 557 aaPredicted RBP11.61□□□□□ -0.55
GCSHP4-201ENST00000538792 PDIA6Q15084 440 aa11.59□□□□□ -0.55
GCSHP4-201ENST00000538792 SPNS2Q8IVW8 549 aa11.59□□□□□ -0.55
GCSHP4-201ENST00000538792 KCNV2Q8TDN2 545 aa11.59□□□□□ -0.55
GCSHP4-201ENST00000538792 PCDHGA10Q9Y5H3 936 aa11.58□□□□□ -0.56
GCSHP4-201ENST00000538792 PBX2P40425 430 aa11.57□□□□□ -0.56
GCSHP4-201ENST00000538792 PSEN2P49810 448 aa11.57□□□□□ -0.56
GCSHP4-201ENST00000538792 KDM2AQ9Y2K7 1162 aa11.57□□□□□ -0.56
GCSHP4-201ENST00000538792 ARHGAP33O14559 1287 aa11.56□□□□□ -0.56
GCSHP4-201ENST00000538792 LSM11P83369 360 aaKnown RBP eCLIP11.56□□□□□ -0.56
GCSHP4-201ENST00000538792 DDX12PQ92771 950 aa11.55□□□□□ -0.56
GCSHP4-201ENST00000538792 ADAM33Q9BZ11 813 aa11.55□□□□□ -0.56
GCSHP4-201ENST00000538792 PTGER2P43116 358 aa11.54□□□□□ -0.56
GCSHP4-201ENST00000538792 DMRTA1Q5VZB9 504 aa11.54□□□□□ -0.56
GCSHP4-201ENST00000538792 ZDHHC16Q969W1 377 aa11.54□□□□□ -0.56
GCSHP4-201ENST00000538792 SPDYE16A6NNV3 312 aaPredicted RBP11.53□□□□□ -0.56
GCSHP4-201ENST00000538792 PHF14O94880 888 aa11.53□□□□□ -0.56
GCSHP4-201ENST00000538792 ANKRD13DQ6ZTN6 518 aa11.53□□□□□ -0.56
GCSHP4-201ENST00000538792 KCNK17Q96T54 332 aa11.53□□□□□ -0.56
GCSHP4-201ENST00000538792 BCL2L12Q9HB09 334 aa11.53□□□□□ -0.56
GCSHP4-201ENST00000538792 TYW1BQ6NUM6 668 aa11.5□□□□□ -0.57
GCSHP4-201ENST00000538792 ARHGEF1Q92888 912 aaKnown RBP11.5□□□□□ -0.57
GCSHP4-201ENST00000538792 MMRN1Q13201 1228 aa11.49□□□□□ -0.57
GCSHP4-201ENST00000538792 EPAS1Q99814 870 aa11.47□□□□□ -0.57
GCSHP4-201ENST00000538792 PTPREP23469 700 aa11.46□□□□□ -0.57
GCSHP4-201ENST00000538792 PRIM1P49642 420 aaKnown RBP11.46□□□□□ -0.57
GCSHP4-201ENST00000538792 NBR1Q14596 966 aa11.46□□□□□ -0.57
GCSHP4-201ENST00000538792 FBXW7Q969H0 707 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms