RNA–Protein interactions for RNA: ENST00000538682.5

SLC3A2-212, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,368 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-212ENST00000538682 PREX2Q70Z35 1606 aa24.33■■□□□ 1.49
SLC3A2-212ENST00000538682 POGZQ7Z3K3 1410 aa24.33■■□□□ 1.48
SLC3A2-212ENST00000538682 SCAPERQ9BY12 1400 aa24.32■■□□□ 1.48
SLC3A2-212ENST00000538682 ARHGAP5Q13017 1502 aa24.31■■□□□ 1.48
SLC3A2-212ENST00000538682 ZFYVE16Q7Z3T8 1539 aa24.31■■□□□ 1.48
SLC3A2-212ENST00000538682 CDC42BPAQ5VT25 1732 aa24.3■■□□□ 1.48
SLC3A2-212ENST00000538682 SIGLEC1Q9BZZ2 1709 aa24.3■■□□□ 1.48
SLC3A2-212ENST00000538682 MAGI2Q86UL8 1455 aa24.29■■□□□ 1.48
SLC3A2-212ENST00000538682 EFCAB2Q5VUJ9 269 aa24.29■■□□□ 1.48
SLC3A2-212ENST00000538682 YEATS2Q9ULM3 1422 aa24.27■■□□□ 1.48
SLC3A2-212ENST00000538682 MADDQ8WXG6 1647 aa24.26■■□□□ 1.47
SLC3A2-212ENST00000538682 KDM5CP41229 1560 aa24.24■■□□□ 1.47
SLC3A2-212ENST00000538682 HECW2Q9P2P5 1572 aa24.24■■□□□ 1.47
SLC3A2-212ENST00000538682 CEP162Q5TB80 1403 aa24.23■■□□□ 1.47
SLC3A2-212ENST00000538682 ITSN2Q9NZM3 1697 aa24.22■■□□□ 1.47
SLC3A2-212ENST00000538682 ZNF518AQ6AHZ1 1483 aa24.21■■□□□ 1.47
SLC3A2-212ENST00000538682 ABCC1P33527 1531 aa24.21■■□□□ 1.47
SLC3A2-212ENST00000538682 PTPRMP28827 1452 aa24.21■■□□□ 1.47
SLC3A2-212ENST00000538682 ARID4BQ4LE39 1312 aaPredicted RBP24.19■■□□□ 1.46
SLC3A2-212ENST00000538682 RIMS1Q86UR5 1692 aaKnown RBP24.19■■□□□ 1.46
SLC3A2-212ENST00000538682 ARHGEF12Q9NZN5 1544 aa24.15■■□□□ 1.46
SLC3A2-212ENST00000538682 ATP10AO60312 1499 aa24.14■■□□□ 1.46
SLC3A2-212ENST00000538682 FER1L4A9Z1Z3 1794 aa24.14■■□□□ 1.45
SLC3A2-212ENST00000538682 C9orf84Q5VXU9 1444 aa24.14■■□□□ 1.45
SLC3A2-212ENST00000538682 GPATCH8Q9UKJ3 1502 aaKnown RBP24.13■■□□□ 1.45
SLC3A2-212ENST00000538682 SAMD9LQ8IVG5 1584 aa24.13■■□□□ 1.45
SLC3A2-212ENST00000538682 DIP2CQ9Y2E4 1556 aa24.13■■□□□ 1.45
SLC3A2-212ENST00000538682 ABCA6Q8N139 1617 aa24.12■■□□□ 1.45
SLC3A2-212ENST00000538682 AFAP1Q8N556 730 aa24.11■■□□□ 1.45
SLC3A2-212ENST00000538682 EHBP1L1Q8N3D4 1523 aa24.1■■□□□ 1.45
SLC3A2-212ENST00000538682 REREQ9P2R6 1566 aa24.1■■□□□ 1.45
SLC3A2-212ENST00000538682 MLH3Q9UHC1 1453 aa24.09■■□□□ 1.45
SLC3A2-212ENST00000538682 TRAPPC8Q9Y2L5 1435 aa24.09■■□□□ 1.45
SLC3A2-212ENST00000538682 KIDINS220Q9ULH0 1771 aa24.08■■□□□ 1.45
SLC3A2-212ENST00000538682 MTUS2Q5JR59 1369 aa24.08■■□□□ 1.44
SLC3A2-212ENST00000538682 SYCP2Q9BX26 1530 aa24.06■■□□□ 1.44
SLC3A2-212ENST00000538682 TIAM1Q13009 1591 aa24.05■■□□□ 1.44
SLC3A2-212ENST00000538682 LOC105371045A0A1W2PR82 267 aa24.03■■□□□ 1.44
SLC3A2-212ENST00000538682 CCNB3Q8WWL7 1395 aa24.02■■□□□ 1.44
SLC3A2-212ENST00000538682 MLECQ14165 292 aa24■■□□□ 1.43
SLC3A2-212ENST00000538682 PLEKHH2Q8IVE3 1493 aa23.99■■□□□ 1.43
SLC3A2-212ENST00000538682 ZNF777Q9ULD5 760 aaPredicted RBP23.99■■□□□ 1.43
SLC3A2-212ENST00000538682 SUPT6HQ7KZ85 1726 aaKnown RBP23.99■■□□□ 1.43
SLC3A2-212ENST00000538682 VPS8Q8N3P4 1428 aa23.99■■□□□ 1.43
SLC3A2-212ENST00000538682 AGLP35573 1532 aa23.98■■□□□ 1.43
SLC3A2-212ENST00000538682 KIAA1107Q9UPP5 1409 aa23.98■■□□□ 1.43
SLC3A2-212ENST00000538682 MYT1LQ9UL68 1186 aa23.97■■□□□ 1.43
SLC3A2-212ENST00000538682 INO80Q9ULG1 1556 aaPredicted RBP23.97■■□□□ 1.43
SLC3A2-212ENST00000538682 LMTK3Q96Q04 1460 aa23.97■■□□□ 1.43
SLC3A2-212ENST00000538682 CFDP1Q9UEE9 299 aaPredicted RBP23.96■■□□□ 1.43
SLC3A2-212ENST00000538682 ATP7AQ04656 1500 aa23.93■■□□□ 1.42
SLC3A2-212ENST00000538682 NCOA2Q15596 1464 aa23.92■■□□□ 1.42
SLC3A2-212ENST00000538682 HNRNPMP52272 730 aaKnown RBP eCLIP23.91■■□□□ 1.421e-20■□□□□ 11
SLC3A2-212ENST00000538682 PREX1Q8TCU6 1659 aa23.88■■□□□ 1.41
SLC3A2-212ENST00000538682 PLXNC1O60486 1568 aa23.88■■□□□ 1.41
SLC3A2-212ENST00000538682 SPAG9O60271 1321 aaKnown RBP23.88■■□□□ 1.41
SLC3A2-212ENST00000538682 C3P01024 1663 aa23.87■■□□□ 1.41
SLC3A2-212ENST00000538682 MAP3K1Q13233 1512 aa23.87■■□□□ 1.41
SLC3A2-212ENST00000538682 MBD5Q9P267 1494 aa23.87■■□□□ 1.41
SLC3A2-212ENST00000538682 ADGBQ8N7X0 1667 aa23.86■■□□□ 1.41
SLC3A2-212ENST00000538682 LRRC9Q6ZRR7 1453 aa23.86■■□□□ 1.41
SLC3A2-212ENST00000538682 PLPPR3Q6T4P5 718 aa23.86■■□□□ 1.41
SLC3A2-212ENST00000538682 ZNF644Q9H582 1327 aaPredicted RBP23.85■■□□□ 1.41
SLC3A2-212ENST00000538682 CAMSAP2Q08AD1 1489 aa23.82■■□□□ 1.4
SLC3A2-212ENST00000538682 SETD1BQ9UPS6 1966 aaKnown RBP23.82■■□□□ 1.4
SLC3A2-212ENST00000538682 A2MP01023 1474 aa23.81■■□□□ 1.4
SLC3A2-212ENST00000538682 MROH2AA6NES4 1674 aa23.8■■□□□ 1.4
SLC3A2-212ENST00000538682 CEBPAP49715 358 aaPredicted RBP23.78■■□□□ 1.4
SLC3A2-212ENST00000538682 CCDC141Q6ZP82 1450 aa23.77■■□□□ 1.4
SLC3A2-212ENST00000538682 RTEL1-TNFRSF6BF6WH68 1400 aa23.77■■□□□ 1.4
SLC3A2-212ENST00000538682 ARHGEF5Q12774 1597 aa23.77■■□□□ 1.4
SLC3A2-212ENST00000538682 CNTLNQ9NXG0 1405 aa23.76■■□□□ 1.39
SLC3A2-212ENST00000538682 CLTCQ00610 1675 aaKnown RBP23.74■■□□□ 1.39
SLC3A2-212ENST00000538682 HSPA2P54652 639 aa23.74■■□□□ 1.39
SLC3A2-212ENST00000538682 KANK4Q5T7N3 995 aaPredicted RBP23.73■■□□□ 1.39
SLC3A2-212ENST00000538682 ESF1Q9H501 851 aaKnown RBP23.71■■□□□ 1.39
SLC3A2-212ENST00000538682 UHRF1BP1Q6BDS2 1440 aa23.69■■□□□ 1.38
SLC3A2-212ENST00000538682 MYOM3Q5VTT5 1437 aa23.68■■□□□ 1.38
SLC3A2-212ENST00000538682 RSPH4AQ5TD94 716 aa23.67■■□□□ 1.38
SLC3A2-212ENST00000538682 STRCQ7RTU9 1775 aa23.67■■□□□ 1.38
SLC3A2-212ENST00000538682 MAST1Q9Y2H9 1570 aa23.66■■□□□ 1.38
SLC3A2-212ENST00000538682 DHX29Q7Z478 1369 aaKnown RBP23.65■■□□□ 1.38
SLC3A2-212ENST00000538682 MIA2Q96PC5 1412 aa23.65■■□□□ 1.38
SLC3A2-212ENST00000538682 ILDR1Q86SU0 546 aaPredicted RBP23.65■■□□□ 1.38
SLC3A2-212ENST00000538682 NPATQ14207 1427 aa23.63■■□□□ 1.37
SLC3A2-212ENST00000538682 ZMYM3Q14202 1370 aa23.63■■□□□ 1.37
SLC3A2-212ENST00000538682 GGT6Q6P531 493 aa23.6■■□□□ 1.37
SLC3A2-212ENST00000538682 CROCC2H7BZ55 1655 aa23.6■■□□□ 1.37
SLC3A2-212ENST00000538682 MYO3AQ8NEV4 1616 aa23.59■■□□□ 1.37
SLC3A2-212ENST00000538682 FAM135AQ9P2D6 1515 aa23.58■■□□□ 1.37
SLC3A2-212ENST00000538682 ZNF142P52746 1687 aaPredicted RBP23.58■■□□□ 1.37
SLC3A2-212ENST00000538682 PPP6R1Q9UPN7 881 aa23.58■■□□□ 1.37
SLC3A2-212ENST00000538682 PTPN23Q9H3S7 1636 aa23.58■■□□□ 1.37
SLC3A2-212ENST00000538682 PTPRKQ15262 1439 aa23.56■■□□□ 1.36
SLC3A2-212ENST00000538682 TSPY4P0CV99 314 aa23.56■■□□□ 1.36
SLC3A2-212ENST00000538682 TSPY10P0CW01 314 aa23.56■■□□□ 1.36
SLC3A2-212ENST00000538682 APLP2Q06481 763 aa23.56■■□□□ 1.36
SLC3A2-212ENST00000538682 KDM5DQ9BY66 1539 aa23.54■■□□□ 1.36
SLC3A2-212ENST00000538682 RNF17Q9BXT8 1623 aaKnown RBP23.54■■□□□ 1.36
SLC3A2-212ENST00000538682 EIF2AK4Q9P2K8 1649 aaKnown RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms