RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 SUPT6HQ7KZ85 1726 aaKnown RBP25.21■■□□□ 1.63
SFSWAP-207ENST00000538548 RNF123Q5XPI4 1314 aa25.21■■□□□ 1.63
SFSWAP-207ENST00000538548 AKNAQ7Z591 1439 aa25.18■■□□□ 1.62
SFSWAP-207ENST00000538548 ZBTB47Q9UFB7 747 aaPredicted RBP25.18■■□□□ 1.62
SFSWAP-207ENST00000538548 CCDC136Q96JN2 1154 aa25.18■■□□□ 1.62
SFSWAP-207ENST00000538548 CUL7Q14999 1698 aa25.18■■□□□ 1.62
SFSWAP-207ENST00000538548 LRRIQ1Q96JM4 1722 aa25.17■■□□□ 1.62
SFSWAP-207ENST00000538548 L3MBTL2Q969R5 705 aa25.17■■□□□ 1.62
SFSWAP-207ENST00000538548 EHBP1L1Q8N3D4 1523 aa25.17■■□□□ 1.62
SFSWAP-207ENST00000538548 POLR1AO95602 1720 aaPredicted RBP25.17■■□□□ 1.62
SFSWAP-207ENST00000538548 THOC2Q8NI27 1593 aaKnown RBP25.16■■□□□ 1.62
SFSWAP-207ENST00000538548 NUDCQ9Y266 331 aa25.16■■□□□ 1.62
SFSWAP-207ENST00000538548 RRP7BPQ9NSQ0 103 aa25.14■■□□□ 1.61
SFSWAP-207ENST00000538548 UGGT2Q9NYU1 1516 aa25.13■■□□□ 1.61
SFSWAP-207ENST00000538548 GRIN2BQ13224 1484 aa25.12■■□□□ 1.61
SFSWAP-207ENST00000538548 KIF7Q2M1P5 1343 aa25.12■■□□□ 1.61
SFSWAP-207ENST00000538548 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
SFSWAP-207ENST00000538548 FBLN2P98095 1184 aa25.12■■□□□ 1.61
SFSWAP-207ENST00000538548 WDR62O43379 1518 aa25.11■■□□□ 1.61
SFSWAP-207ENST00000538548 TCOF1Q13428 1488 aaKnown RBP25.11■■□□□ 1.61
SFSWAP-207ENST00000538548 SAMD9Q5K651 1589 aa25.1■■□□□ 1.61
SFSWAP-207ENST00000538548 SPATA31E1Q6ZUB1 1445 aa25.1■■□□□ 1.61
SFSWAP-207ENST00000538548 MPHOSPH9Q99550 1183 aa25.1■■□□□ 1.61
SFSWAP-207ENST00000538548 KDM6BO15054 1643 aa25.06■■□□□ 1.6
SFSWAP-207ENST00000538548 ANO8Q9HCE9 1232 aaPredicted RBP25.06■■□□□ 1.6
SFSWAP-207ENST00000538548 CHIC2Q9UKJ5 165 aa25.05■■□□□ 1.6
SFSWAP-207ENST00000538548 RPRD2Q5VT52 1461 aaKnown RBP25.04■■□□□ 1.6
SFSWAP-207ENST00000538548 NBPF8Q3BBV2 869 aa25.03■■□□□ 1.6
SFSWAP-207ENST00000538548 TEX14Q8IWB6 1497 aa25.03■■□□□ 1.6
SFSWAP-207ENST00000538548 IFT140Q96RY7 1462 aa25.03■■□□□ 1.6
SFSWAP-207ENST00000538548 ARID3CA6NKF2 412 aa25.02■■□□□ 1.6
SFSWAP-207ENST00000538548 PBRM1Q86U86 1689 aa25.01■■□□□ 1.59
SFSWAP-207ENST00000538548 DHX29Q7Z478 1369 aaKnown RBP25■■□□□ 1.59
SFSWAP-207ENST00000538548 ANKRD30BQ9BXX2 1392 aa24.99■■□□□ 1.59
SFSWAP-207ENST00000538548 MIA2Q96PC5 1412 aa24.98■■□□□ 1.59
SFSWAP-207ENST00000538548 MAGI3Q5TCQ9 1506 aa24.97■■□□□ 1.59
SFSWAP-207ENST00000538548 USP35Q9P2H5 1018 aa24.97■■□□□ 1.59
SFSWAP-207ENST00000538548 FOXD1Q16676 465 aa24.96■■□□□ 1.59
SFSWAP-207ENST00000538548 IL27Q8NEV9 243 aa24.94■■□□□ 1.58
SFSWAP-207ENST00000538548 SALL2Q9Y467 1007 aaPredicted RBP24.94■■□□□ 1.58
SFSWAP-207ENST00000538548 EIF4G3O43432 1585 aaKnown RBP24.94■■□□□ 1.58
SFSWAP-207ENST00000538548 CHMP7Q8WUX9 453 aaPredicted RBP24.91■■□□□ 1.58
SFSWAP-207ENST00000538548 TCERG1O14776 1098 aaKnown RBP24.9■■□□□ 1.58
SFSWAP-207ENST00000538548 ADAMTS12P58397 1594 aa24.9■■□□□ 1.58
SFSWAP-207ENST00000538548 PNISRQ8TF01 805 aaKnown RBP24.88■■□□□ 1.57
SFSWAP-207ENST00000538548 ARID4BQ4LE39 1312 aaPredicted RBP24.86■■□□□ 1.57
SFSWAP-207ENST00000538548 NEFMP07197 916 aa24.85■■□□□ 1.57
SFSWAP-207ENST00000538548 ROCK1Q13464 1354 aa24.85■■□□□ 1.57
SFSWAP-207ENST00000538548 NPM2Q86SE8 214 aaKnown RBP24.84■■□□□ 1.57
SFSWAP-207ENST00000538548 WASHC2CQ9Y4E1 1318 aa24.83■■□□□ 1.57
SFSWAP-207ENST00000538548 PPM1GO15355 546 aaPredicted RBP24.82■■□□□ 1.56
SFSWAP-207ENST00000538548 PDE4AP27815 886 aa24.82■■□□□ 1.56
SFSWAP-207ENST00000538548 RRP1P56182 461 aaKnown RBP24.82■■□□□ 1.56
SFSWAP-207ENST00000538548 BCORL1Q5H9F3 1711 aa24.81■■□□□ 1.56
SFSWAP-207ENST00000538548 MS4A1P11836 297 aa24.81■■□□□ 1.56
SFSWAP-207ENST00000538548 TMC1Q8TDI8 760 aa24.8■■□□□ 1.56
SFSWAP-207ENST00000538548 LAS1LQ9Y4W2 734 aaKnown RBP24.8■■□□□ 1.56
SFSWAP-207ENST00000538548 USP47Q96K76 1375 aa24.8■■□□□ 1.56
SFSWAP-207ENST00000538548 BACH2Q9BYV9 841 aa24.8■■□□□ 1.56
SFSWAP-207ENST00000538548 LRPPRCP42704 1394 aaKnown RBP24.79■■□□□ 1.56
SFSWAP-207ENST00000538548 MBD5Q9P267 1494 aa24.79■■□□□ 1.56
SFSWAP-207ENST00000538548 ROCK2O75116 1388 aaKnown RBP24.78■■□□□ 1.56
SFSWAP-207ENST00000538548 CNGB1Q14028 1251 aaPredicted RBP24.78■■□□□ 1.56
SFSWAP-207ENST00000538548 SLC4A1APQ9BWU0 796 aaKnown RBP24.78■■□□□ 1.56
SFSWAP-207ENST00000538548 RTN4Q9NQC3 1192 aaKnown RBP24.78■■□□□ 1.56
SFSWAP-207ENST00000538548 EPRSP07814 1512 aaKnown RBP24.76■■□□□ 1.55
SFSWAP-207ENST00000538548 EXOC6Q8TAG9 804 aa24.76■■□□□ 1.55
SFSWAP-207ENST00000538548 DAPK1P53355 1430 aa24.76■■□□□ 1.55
SFSWAP-207ENST00000538548 GRIN2AQ12879 1464 aa24.75■■□□□ 1.55
SFSWAP-207ENST00000538548 IQGAP2Q13576 1575 aa24.74■■□□□ 1.55
SFSWAP-207ENST00000538548 POLR3GLQ9BT43 218 aa24.74■■□□□ 1.55
SFSWAP-207ENST00000538548 KDM5CP41229 1560 aa24.73■■□□□ 1.55
SFSWAP-207ENST00000538548 KIF14Q15058 1648 aa24.72■■□□□ 1.55
SFSWAP-207ENST00000538548 SENP3-EIF4A1A0A087X0R7 540 aa24.72■■□□□ 1.55
SFSWAP-207ENST00000538548 BRD4O60885 1362 aaPredicted RBP24.72■■□□□ 1.55
SFSWAP-207ENST00000538548 DNMT1P26358 1616 aaKnown RBP24.71■■□□□ 1.55
SFSWAP-207ENST00000538548 KIF15Q9NS87 1388 aa24.71■■□□□ 1.55
SFSWAP-207ENST00000538548 RCAN3Q9UKA8 241 aa24.71■■□□□ 1.55
SFSWAP-207ENST00000538548 KTN1Q86UP2 1357 aaKnown RBP24.7■■□□□ 1.55
SFSWAP-207ENST00000538548 ABCC5O15440 1437 aa24.69■■□□□ 1.54
SFSWAP-207ENST00000538548 DDRGK1Q96HY6 314 aa24.67■■□□□ 1.54
SFSWAP-207ENST00000538548 CDK13Q14004 1512 aaKnown RBP24.67■■□□□ 1.54
SFSWAP-207ENST00000538548 PZPP20742 1482 aa24.66■■□□□ 1.54
SFSWAP-207ENST00000538548 MYBBP1AQ9BQG0 1328 aaKnown RBP24.66■■□□□ 1.54
SFSWAP-207ENST00000538548 PDE3BQ13370 1112 aa24.65■■□□□ 1.54
SFSWAP-207ENST00000538548 SYNJ2O15056 1496 aa24.64■■□□□ 1.54
SFSWAP-207ENST00000538548 RALBP1Q15311 655 aa24.64■■□□□ 1.54
SFSWAP-207ENST00000538548 MAGI1Q96QZ7 1491 aaPredicted RBP24.63■■□□□ 1.53
SFSWAP-207ENST00000538548 CEP170Q5SW79 1584 aa24.63■■□□□ 1.53
SFSWAP-207ENST00000538548 KIAA0586Q9BVV6 1533 aa24.62■■□□□ 1.53
SFSWAP-207ENST00000538548 GSE1Q14687 1217 aa24.61■■□□□ 1.53
SFSWAP-207ENST00000538548 KIAA1107Q9UPP5 1409 aa24.6■■□□□ 1.53
SFSWAP-207ENST00000538548 ZNF326Q5BKZ1 582 aaKnown RBP24.6■■□□□ 1.53
SFSWAP-207ENST00000538548 JPH4Q96JJ6 628 aa24.6■■□□□ 1.53
SFSWAP-207ENST00000538548 RALGAPBQ86X10 1494 aa24.59■■□□□ 1.53
SFSWAP-207ENST00000538548 UHRF1BP1Q6BDS2 1440 aa24.58■■□□□ 1.53
SFSWAP-207ENST00000538548 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.58■■□□□ 1.52
SFSWAP-207ENST00000538548 DISP1Q96F81 1524 aa24.57■■□□□ 1.52
SFSWAP-207ENST00000538548 BRPF3Q9ULD4 1205 aa24.55■■□□□ 1.52
SFSWAP-207ENST00000538548 E9PCH4 1651 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms