RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 ROCK2O75116 1388 aaKnown RBP8.7□□□□□ -1.02
SORT1-209ENST00000538502 OS9Q13438 667 aaPredicted RBP8.7□□□□□ -1.02
SORT1-209ENST00000538502 CCDC34Q96HJ3 373 aa8.7□□□□□ -1.02
SORT1-209ENST00000538502 MTERF4Q7Z6M4 381 aaKnown RBP8.69□□□□□ -1.02
SORT1-209ENST00000538502 PLEKHD1A6NEE1 506 aa8.69□□□□□ -1.02
SORT1-209ENST00000538502 KIAA1211Q6ZU35 1233 aa8.68□□□□□ -1.02
SORT1-209ENST00000538502 ARHGAP35Q9NRY4 1499 aa8.68□□□□□ -1.02
SORT1-209ENST00000538502 CHMP4AQ9BY43 222 aa8.68□□□□□ -1.02
SORT1-209ENST00000538502 VPS8Q8N3P4 1428 aa8.68□□□□□ -1.02
SORT1-209ENST00000538502 TPRNQ4KMQ1 711 aa8.68□□□□□ -1.02
SORT1-209ENST00000538502 MAP7D2Q96T17 732 aa8.68□□□□□ -1.02
SORT1-209ENST00000538502 GPS2Q13227 327 aa8.67□□□□□ -1.02
SORT1-209ENST00000538502 CC2D1BQ5T0F9 858 aaKnown RBP8.66□□□□□ -1.02
SORT1-209ENST00000538502 SIN3AQ96ST3 1273 aa8.66□□□□□ -1.02
SORT1-209ENST00000538502 CFDP1Q9UEE9 299 aaPredicted RBP8.66□□□□□ -1.02
SORT1-209ENST00000538502 HSPA5P11021 654 aaKnown RBP8.66□□□□□ -1.02
SORT1-209ENST00000538502 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.66□□□□□ -1.02
SORT1-209ENST00000538502 CENPQQ7L2Z9 268 aaPredicted RBP8.66□□□□□ -1.02
SORT1-209ENST00000538502 CHMP4CQ96CF2 233 aa8.66□□□□□ -1.02
SORT1-209ENST00000538502 VSIG10Q8N0Z9 540 aa8.65□□□□□ -1.02
SORT1-209ENST00000538502 PPP1R15AO75807 674 aaPredicted RBP8.65□□□□□ -1.02
SORT1-209ENST00000538502 GZF1Q9H116 711 aaPredicted RBP8.65□□□□□ -1.03
SORT1-209ENST00000538502 KIF16BQ96L93 1317 aa8.65□□□□□ -1.03
SORT1-209ENST00000538502 NEUROD2Q15784 382 aa8.64□□□□□ -1.03
SORT1-209ENST00000538502 SPRYD3Q8NCJ5 442 aa8.64□□□□□ -1.03
SORT1-209ENST00000538502 ST18O60284 1047 aa8.64□□□□□ -1.03
SORT1-209ENST00000538502 NOC3LQ8WTT2 800 aaKnown RBP8.64□□□□□ -1.03
SORT1-209ENST00000538502 GNL2Q13823 731 aaKnown RBP8.64□□□□□ -1.03
SORT1-209ENST00000538502 KANK1Q14678 1352 aa8.64□□□□□ -1.03
SORT1-209ENST00000538502 FAM161AQ3B820 660 aa8.64□□□□□ -1.03
SORT1-209ENST00000538502 AMER1Q5JTC6 1135 aaPredicted RBP8.64□□□□□ -1.03
SORT1-209ENST00000538502 TEX35Q5T0J7 233 aa8.64□□□□□ -1.03
SORT1-209ENST00000538502 SLKQ9H2G2 1235 aaPredicted RBP8.64□□□□□ -1.03
SORT1-209ENST00000538502 HDAC5Q9UQL6 1122 aa8.64□□□□□ -1.03
SORT1-209ENST00000538502 RGL3Q3MIN7 710 aa8.64□□□□□ -1.03
SORT1-209ENST00000538502 EIF3AQ14152 1382 aaKnown RBP8.63□□□□□ -1.03
SORT1-209ENST00000538502 A0A0U1RQG5 324 aaPredicted RBP8.63□□□□□ -1.03
SORT1-209ENST00000538502 NAP1L2Q9ULW6 460 aaPredicted RBP8.63□□□□□ -1.03
SORT1-209ENST00000538502 GPATCH3Q96I76 525 aa8.62□□□□□ -1.03
SORT1-209ENST00000538502 KIF3AQ9Y496 699 aa8.62□□□□□ -1.03
SORT1-209ENST00000538502 ATP6V1DQ9Y5K8 247 aa8.62□□□□□ -1.03
SORT1-209ENST00000538502 MORC1Q86VD1 984 aa8.62□□□□□ -1.03
SORT1-209ENST00000538502 NACADO15069 1562 aa8.62□□□□□ -1.03
SORT1-209ENST00000538502 NOM1Q5C9Z4 860 aaKnown RBP8.62□□□□□ -1.03
SORT1-209ENST00000538502 HMMRO75330 724 aa8.61□□□□□ -1.03
SORT1-209ENST00000538502 U2SURPO15042 1029 aaKnown RBP8.61□□□□□ -1.03
SORT1-209ENST00000538502 TPM2P07951 284 aa8.61□□□□□ -1.03
SORT1-209ENST00000538502 ZNF771Q7L3S4 317 aaPredicted RBP8.61□□□□□ -1.03
SORT1-209ENST00000538502 BAZ1AQ9NRL2 1556 aaPredicted RBP8.61□□□□□ -1.03
SORT1-209ENST00000538502 TPM3P06753 285 aa8.61□□□□□ -1.03
SORT1-209ENST00000538502 CHMP7Q8WUX9 453 aaPredicted RBP8.61□□□□□ -1.03
SORT1-209ENST00000538502 KIF15Q9NS87 1388 aa8.6□□□□□ -1.03
SORT1-209ENST00000538502 CALRP27797 417 aaKnown RBP8.6□□□□□ -1.03
SORT1-209ENST00000538502 MFAP1P55081 439 aaKnown RBP8.6□□□□□ -1.03
SORT1-209ENST00000538502 GOLGA2Q08379 1002 aa8.6□□□□□ -1.03
SORT1-209ENST00000538502 CCDC70Q6NSX1 233 aa8.6□□□□□ -1.03
SORT1-209ENST00000538502 PDE4AP27815 886 aa8.6□□□□□ -1.03
SORT1-209ENST00000538502 ZBED9Q6R2W3 1325 aa8.59□□□□□ -1.03
SORT1-209ENST00000538502 BAZ1BQ9UIG0 1483 aaKnown RBP8.59□□□□□ -1.03
SORT1-209ENST00000538502 POGKQ9P215 609 aa8.59□□□□□ -1.03
SORT1-209ENST00000538502 ITPRIPQ8IWB1 547 aa8.59□□□□□ -1.03
SORT1-209ENST00000538502 AAMPQ13685 434 aa8.58□□□□□ -1.04
SORT1-209ENST00000538502 FMN1Q68DA7 1419 aa8.58□□□□□ -1.04
SORT1-209ENST00000538502 NGEFQ8N5V2 710 aa8.58□□□□□ -1.04
SORT1-209ENST00000538502 RAB3GAP2Q9H2M9 1393 aa8.58□□□□□ -1.04
SORT1-209ENST00000538502 NLRP13Q86W25 1043 aa8.58□□□□□ -1.04
SORT1-209ENST00000538502 C14orf37Q86TY3 774 aa8.57□□□□□ -1.04
SORT1-209ENST00000538502 CENPJQ9HC77 1338 aaPredicted RBP8.57□□□□□ -1.04
SORT1-209ENST00000538502 DCAF11Q8TEB1 546 aa8.57□□□□□ -1.04
SORT1-209ENST00000538502 RTF1Q92541 710 aaKnown RBP8.57□□□□□ -1.04
SORT1-209ENST00000538502 MYBBP1AQ9BQG0 1328 aaKnown RBP8.56□□□□□ -1.04
SORT1-209ENST00000538502 FAM43AQ8N2R8 423 aa8.56□□□□□ -1.04
SORT1-209ENST00000538502 ARID3AQ99856 593 aa8.56□□□□□ -1.04
SORT1-209ENST00000538502 ACBD3Q9H3P7 528 aa8.56□□□□□ -1.04
SORT1-209ENST00000538502 CHMP5Q9NZZ3 219 aa8.56□□□□□ -1.04
SORT1-209ENST00000538502 DDX49Q9Y6V7 483 aaKnown RBP8.56□□□□□ -1.04
SORT1-209ENST00000538502 LMOD3Q0VAK6 560 aa8.56□□□□□ -1.04
SORT1-209ENST00000538502 PLPPR3Q6T4P5 718 aa8.56□□□□□ -1.04
SORT1-209ENST00000538502 GOLGA6L19H0YKK7 550 aa8.56□□□□□ -1.04
SORT1-209ENST00000538502 HDGFP51858 240 aaKnown RBP8.56□□□□□ -1.04
SORT1-209ENST00000538502 CCDC66A2RUB6 948 aa8.55□□□□□ -1.04
SORT1-209ENST00000538502 ARGLU1Q9NWB6 273 aaPredicted RBP8.55□□□□□ -1.04
SORT1-209ENST00000538502 CWC15Q9P013 229 aaKnown RBP8.55□□□□□ -1.04
SORT1-209ENST00000538502 ZBTB7CA1YPR0 619 aa8.55□□□□□ -1.04
SORT1-209ENST00000538502 HDGFL2Q7Z4V5 671 aaPredicted RBP8.55□□□□□ -1.04
SORT1-209ENST00000538502 TPM1P09493 284 aa8.55□□□□□ -1.04
SORT1-209ENST00000538502 DIAPH3Q9NSV4 1193 aa8.55□□□□□ -1.04
SORT1-209ENST00000538502 CGNL1Q0VF96 1302 aa8.55□□□□□ -1.04
SORT1-209ENST00000538502 RRP1P56182 461 aaKnown RBP8.55□□□□□ -1.04
SORT1-209ENST00000538502 MRE11P49959 708 aa8.54□□□□□ -1.04
SORT1-209ENST00000538502 CCDC39Q9UFE4 941 aa8.54□□□□□ -1.04
SORT1-209ENST00000538502 TSR1Q2NL82 804 aaKnown RBP8.53□□□□□ -1.04
SORT1-209ENST00000538502 ISY1Q9ULR0 285 aaKnown RBP8.53□□□□□ -1.04
SORT1-209ENST00000538502 SMC4Q9NTJ3 1288 aa8.53□□□□□ -1.04
SORT1-209ENST00000538502 HSP90B1P14625 803 aaKnown RBP8.53□□□□□ -1.04
SORT1-209ENST00000538502 NUCB2P80303 420 aa8.52□□□□□ -1.04
SORT1-209ENST00000538502 SENP3-EIF4A1A0A087X0R7 540 aa8.52□□□□□ -1.05
SORT1-209ENST00000538502 SPAG9O60271 1321 aaKnown RBP8.52□□□□□ -1.05
SORT1-209ENST00000538502 LETM1O95202 739 aaPredicted RBP8.52□□□□□ -1.05
SORT1-209ENST00000538502 E9PSI1 815 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms