RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 BCL11BQ9C0K0 894 aaPredicted RBP8.31□□□□□ -1.08
SNHG1-203ENST00000537024 SCRIBQ14160 1630 aa8.31□□□□□ -1.08
SNHG1-203ENST00000537024 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.3□□□□□ -1.08
SNHG1-203ENST00000537024 ZFP91Q96JP5 570 aaPredicted RBP8.3□□□□□ -1.08
SNHG1-203ENST00000537024 RYDENQ9NUL5 291 aaKnown RBP8.3□□□□□ -1.08
SNHG1-203ENST00000537024 OCEL1Q9H607 264 aa8.26□□□□□ -1.09
SNHG1-203ENST00000537024 MMRN1Q13201 1228 aa8.24□□□□□ -1.09
SNHG1-203ENST00000537024 SPNS2Q8IVW8 549 aa8.24□□□□□ -1.09
SNHG1-203ENST00000537024 TMEM121BQ9BXQ6 578 aaPredicted RBP8.24□□□□□ -1.09
SNHG1-203ENST00000537024 BAZ1AQ9NRL2 1556 aaPredicted RBP8.23□□□□□ -1.09
SNHG1-203ENST00000537024 ZNF467Q7Z7K2 595 aaPredicted RBP8.23□□□□□ -1.09
SNHG1-203ENST00000537024 NESP48681 1621 aa8.22□□□□□ -1.09
SNHG1-203ENST00000537024 PCDHB8Q9UN66 801 aa8.21□□□□□ -1.1
SNHG1-203ENST00000537024 RIMBP3CA6NJZ7 1639 aa8.21□□□□□ -1.1
SNHG1-203ENST00000537024 RIMBP3BA6NNM3 1639 aa8.21□□□□□ -1.1
SNHG1-203ENST00000537024 RIMBP3Q9UFD9 1639 aa8.21□□□□□ -1.1
SNHG1-203ENST00000537024 SNPHO15079 494 aa8.2□□□□□ -1.1
SNHG1-203ENST00000537024 MARVELD3Q96A59 401 aa8.2□□□□□ -1.1
SNHG1-203ENST00000537024 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.2□□□□□ -1.1
SNHG1-203ENST00000537024 SMARCA2P51531 1590 aa8.18□□□□□ -1.1
SNHG1-203ENST00000537024 PDAP1Q13442 181 aaKnown RBP8.18□□□□□ -1.1
SNHG1-203ENST00000537024 PDCD7Q8N8D1 485 aaKnown RBP8.16□□□□□ -1.1
SNHG1-203ENST00000537024 DCAF1Q9Y4B6 1507 aa8.15□□□□□ -1.1
SNHG1-203ENST00000537024 ILDR1Q86SU0 546 aaPredicted RBP8.15□□□□□ -1.1
SNHG1-203ENST00000537024 KIF21AQ7Z4S6 1674 aa8.14□□□□□ -1.11
SNHG1-203ENST00000537024 NCAPD3P42695 1498 aa8.13□□□□□ -1.11
SNHG1-203ENST00000537024 PSEN1P49768 467 aa8.13□□□□□ -1.11
SNHG1-203ENST00000537024 P3H3Q8IVL6 736 aa8.13□□□□□ -1.11
SNHG1-203ENST00000537024 POTEB3A0JP26 581 aa8.12□□□□□ -1.11
SNHG1-203ENST00000537024 POTEBQ6S5H4 581 aa8.12□□□□□ -1.11
SNHG1-203ENST00000537024 WDR70Q9NW82 654 aa8.12□□□□□ -1.11
SNHG1-203ENST00000537024 ARHGEF11O15085 1522 aa8.09□□□□□ -1.11
SNHG1-203ENST00000537024 EMP3P54852 163 aa8.09□□□□□ -1.11
SNHG1-203ENST00000537024 L3MBTL3Q96JM7 780 aaPredicted RBP8.09□□□□□ -1.11
SNHG1-203ENST00000537024 KRTAP3-3Q9BYR6 98 aa8.09□□□□□ -1.11
SNHG1-203ENST00000537024 KRTAP3-2Q9BYR7 98 aa8.09□□□□□ -1.11
SNHG1-203ENST00000537024 LAMC3Q9Y6N6 1575 aa8.09□□□□□ -1.11
SNHG1-203ENST00000537024 ZCCHC6Q5VYS8 1495 aaKnown RBP8.08□□□□□ -1.12
SNHG1-203ENST00000537024 C3orf67Q6ZVT6 689 aa8.08□□□□□ -1.12
SNHG1-203ENST00000537024 MFRPQ9BY79 579 aa8.07□□□□□ -1.12
SNHG1-203ENST00000537024 HMGXB3Q12766 1538 aa8.07□□□□□ -1.12
SNHG1-203ENST00000537024 MKRN3Q13064 507 aaKnown RBP8.06□□□□□ -1.12
SNHG1-203ENST00000537024 CADPS2Q86UW7 1296 aa8.06□□□□□ -1.12
SNHG1-203ENST00000537024 HS3ST6Q96QI5 342 aa8.06□□□□□ -1.12
SNHG1-203ENST00000537024 WDR62O43379 1518 aa8.06□□□□□ -1.12
SNHG1-203ENST00000537024 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.05□□□□□ -1.12
SNHG1-203ENST00000537024 FAM205CA6NFA0 338 aa8.04□□□□□ -1.12
SNHG1-203ENST00000537024 NLRP6P59044 892 aa8.03□□□□□ -1.12
SNHG1-203ENST00000537024 GOLGA2Q08379 1002 aa8.03□□□□□ -1.12
SNHG1-203ENST00000537024 KCNV2Q8TDN2 545 aa8.03□□□□□ -1.12
SNHG1-203ENST00000537024 CABP2Q9NPB3 220 aa8.03□□□□□ -1.12
SNHG1-203ENST00000537024 MRC2Q9UBG0 1479 aa8.02□□□□□ -1.13
SNHG1-203ENST00000537024 ATAD2BQ9ULI0 1458 aa8.02□□□□□ -1.13
SNHG1-203ENST00000537024 EFCAB3Q8N7B9 438 aa8.02□□□□□ -1.13
SNHG1-203ENST00000537024 SOX12O15370 315 aa8.01□□□□□ -1.13
SNHG1-203ENST00000537024 DPY19L2Q6NUT2 758 aa8.01□□□□□ -1.13
SNHG1-203ENST00000537024 PDS5BQ9NTI5 1447 aa8□□□□□ -1.13
SNHG1-203ENST00000537024 HOXB3P14651 431 aaPredicted RBP7.99□□□□□ -1.13
SNHG1-203ENST00000537024 FBXO22Q8NEZ5 403 aa7.99□□□□□ -1.13
SNHG1-203ENST00000537024 TULP1O00294 542 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-203ENST00000537024 PPP1R37O75864 691 aa7.98□□□□□ -1.13
SNHG1-203ENST00000537024 PHF8Q9UPP1 1060 aa7.98□□□□□ -1.13
SNHG1-203ENST00000537024 ARAP1Q96P48 1450 aa7.98□□□□□ -1.13
SNHG1-203ENST00000537024 CYB5RLQ6IPT4 315 aa7.96□□□□□ -1.14
SNHG1-203ENST00000537024 LMOD2Q6P5Q4 547 aa7.95□□□□□ -1.14
SNHG1-203ENST00000537024 E2F4Q16254 413 aa7.94□□□□□ -1.14
SNHG1-203ENST00000537024 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.94□□□□□ -1.14
SNHG1-203ENST00000537024 ARHGEF1Q92888 912 aaKnown RBP7.94□□□□□ -1.14
SNHG1-203ENST00000537024 BOLA1Q9Y3E2 137 aa7.94□□□□□ -1.14
SNHG1-203ENST00000537024 HOXB1P14653 301 aaPredicted RBP7.93□□□□□ -1.14
SNHG1-203ENST00000537024 BAZ1BQ9UIG0 1483 aaKnown RBP7.9□□□□□ -1.14
SNHG1-203ENST00000537024 PDE4AP27815 886 aa7.9□□□□□ -1.14
SNHG1-203ENST00000537024 ZNF710Q8N1W2 664 aa7.89□□□□□ -1.15
SNHG1-203ENST00000537024 ERBB3P21860 1342 aa7.88□□□□□ -1.15
SNHG1-203ENST00000537024 G3V3G9 751 aa7.88□□□□□ -1.15
SNHG1-203ENST00000537024 LARP6Q9BRS8 491 aaKnown RBP7.88□□□□□ -1.15
SNHG1-203ENST00000537024 SMARCA4P51532 1647 aa7.88□□□□□ -1.15
SNHG1-203ENST00000537024 NCKAP5LQ9HCH0 1330 aa7.87□□□□□ -1.15
SNHG1-203ENST00000537024 DOK7Q18PE1 504 aa7.87□□□□□ -1.15
SNHG1-203ENST00000537024 MS4A4AQ96JQ5 239 aa7.87□□□□□ -1.15
SNHG1-203ENST00000537024 SEMA3EO15041 775 aa7.85□□□□□ -1.15
SNHG1-203ENST00000537024 DDX27Q96GQ7 796 aaKnown RBP7.85□□□□□ -1.15
SNHG1-203ENST00000537024 CEP164Q9UPV0 1460 aa7.85□□□□□ -1.15
SNHG1-203ENST00000537024 TMEM132AQ24JP5 1023 aa7.84□□□□□ -1.15
SNHG1-203ENST00000537024 RNF166Q96A37 237 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-203ENST00000537024 RSF1Q96T23 1441 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-203ENST00000537024 TESPA1A2RU30 521 aaPredicted RBP7.83□□□□□ -1.16
SNHG1-203ENST00000537024 MFSD10Q14728 455 aa7.83□□□□□ -1.16
SNHG1-203ENST00000537024 VARS2Q5ST30 1063 aaKnown RBP7.83□□□□□ -1.16
SNHG1-203ENST00000537024 SMYD5Q6GMV2 418 aa7.83□□□□□ -1.16
SNHG1-203ENST00000537024 CRISPLD2Q9H0B8 497 aa7.83□□□□□ -1.16
SNHG1-203ENST00000537024 GTF3C3Q9Y5Q9 886 aa7.83□□□□□ -1.16
SNHG1-203ENST00000537024 CADPSQ9ULU8 1353 aa7.83□□□□□ -1.16
SNHG1-203ENST00000537024 PEG3Q9GZU2 1588 aa7.82□□□□□ -1.16
SNHG1-203ENST00000537024 TMEM92Q6UXU6 159 aa7.81□□□□□ -1.16
SNHG1-203ENST00000537024 ZC3H15Q8WU90 426 aaKnown RBP7.81□□□□□ -1.16
SNHG1-203ENST00000537024 CHD1O14646 1710 aa7.81□□□□□ -1.16
SNHG1-203ENST00000537024 RIMBP2O15034 1052 aa7.8□□□□□ -1.16
SNHG1-203ENST00000537024 MYT1LQ9UL68 1186 aa7.8□□□□□ -1.16
SNHG1-203ENST00000537024 ZNF687Q8N1G0 1237 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms