RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 PREX2Q70Z35 1606 aa21.41■■□□□ 1.02
RPAIN-205ENST00000536255 SCAPERQ9BY12 1400 aa21.4■■□□□ 1.02
RPAIN-205ENST00000536255 EHBP1L1Q8N3D4 1523 aa21.39■■□□□ 1.01
RPAIN-205ENST00000536255 POGZQ7Z3K3 1410 aa21.38■■□□□ 1.01
RPAIN-205ENST00000536255 CDC42BPBQ9Y5S2 1711 aa21.38■■□□□ 1.01
RPAIN-205ENST00000536255 KDM4FA0A1W2PPD8 638 aa21.38■■□□□ 1.01
RPAIN-205ENST00000536255 ZMYM4Q5VZL5 1548 aa21.37■■□□□ 1.01
RPAIN-205ENST00000536255 CDC42BPAQ5VT25 1732 aa21.36■■□□□ 1.01
RPAIN-205ENST00000536255 TIAM1Q13009 1591 aa21.35■■□□□ 1.01
RPAIN-205ENST00000536255 GPATCH8Q9UKJ3 1502 aaKnown RBP21.34■■□□□ 1.01
RPAIN-205ENST00000536255 ARHGEF40Q8TER5 1519 aa21.34■■□□□ 1.01
RPAIN-205ENST00000536255 CCNB3Q8WWL7 1395 aa21.33■■□□□ 1
RPAIN-205ENST00000536255 MAGI2Q86UL8 1455 aa21.32■■□□□ 1
RPAIN-205ENST00000536255 ZNF518AQ6AHZ1 1483 aa21.31■■□□□ 1
RPAIN-205ENST00000536255 ABCC1P33527 1531 aa21.3■■□□□ 1
RPAIN-205ENST00000536255 ZFYVE16Q7Z3T8 1539 aa21.29■■□□□ 1
RPAIN-205ENST00000536255 MAP3K1Q13233 1512 aa21.29■■□□□ 1
RPAIN-205ENST00000536255 YEATS2Q9ULM3 1422 aa21.28■■□□□ 1
RPAIN-205ENST00000536255 KDM5CP41229 1560 aa21.27■■□□□ 1
RPAIN-205ENST00000536255 APLP2Q06481 763 aa21.27■■□□□ 1
RPAIN-205ENST00000536255 CFDP1Q9UEE9 299 aaPredicted RBP21.27■■□□□ 1
RPAIN-205ENST00000536255 ARHGEF12Q9NZN5 1544 aa21.27■■□□□ 1
RPAIN-205ENST00000536255 LRRC9Q6ZRR7 1453 aa21.26■□□□□ 0.99
RPAIN-205ENST00000536255 ZNF777Q9ULD5 760 aaPredicted RBP21.26■□□□□ 0.99
RPAIN-205ENST00000536255 SAMD9LQ8IVG5 1584 aa21.26■□□□□ 0.99
RPAIN-205ENST00000536255 SUPT6HQ7KZ85 1726 aaKnown RBP21.26■□□□□ 0.99
RPAIN-205ENST00000536255 ITSN2Q9NZM3 1697 aa21.25■□□□□ 0.99
RPAIN-205ENST00000536255 AFAP1Q8N556 730 aa21.25■□□□□ 0.99
RPAIN-205ENST00000536255 NCOA2Q15596 1464 aa21.25■□□□□ 0.99
RPAIN-205ENST00000536255 TRAPPC8Q9Y2L5 1435 aa21.24■□□□□ 0.99
RPAIN-205ENST00000536255 SYCP2Q9BX26 1530 aa21.22■□□□□ 0.99
RPAIN-205ENST00000536255 PLEKHH2Q8IVE3 1493 aa21.21■□□□□ 0.99
RPAIN-205ENST00000536255 HECW2Q9P2P5 1572 aa21.21■□□□□ 0.99
RPAIN-205ENST00000536255 ARID4BQ4LE39 1312 aaPredicted RBP21.21■□□□□ 0.99
RPAIN-205ENST00000536255 KIAA1107Q9UPP5 1409 aa21.21■□□□□ 0.99
RPAIN-205ENST00000536255 MLH3Q9UHC1 1453 aa21.2■□□□□ 0.98
RPAIN-205ENST00000536255 KANK4Q5T7N3 995 aaPredicted RBP21.19■□□□□ 0.98
RPAIN-205ENST00000536255 ATP10AO60312 1499 aa21.19■□□□□ 0.98
RPAIN-205ENST00000536255 HNRNPMP52272 730 aaKnown RBP eCLIP21.17■□□□□ 0.98
RPAIN-205ENST00000536255 C9orf84Q5VXU9 1444 aa21.17■□□□□ 0.98
RPAIN-205ENST00000536255 BCORL1Q5H9F3 1711 aa21.16■□□□□ 0.98
RPAIN-205ENST00000536255 MYT1LQ9UL68 1186 aa21.16■□□□□ 0.98
RPAIN-205ENST00000536255 SIGLEC1Q9BZZ2 1709 aa21.15■□□□□ 0.98
RPAIN-205ENST00000536255 ADAMTSL3P82987 1691 aa21.15■□□□□ 0.98
RPAIN-205ENST00000536255 ZNF644Q9H582 1327 aaPredicted RBP21.15■□□□□ 0.98
RPAIN-205ENST00000536255 DIP2CQ9Y2E4 1556 aa21.14■□□□□ 0.98
RPAIN-205ENST00000536255 ABCA6Q8N139 1617 aa21.13■□□□□ 0.97
RPAIN-205ENST00000536255 KIDINS220Q9ULH0 1771 aa21.11■□□□□ 0.97
RPAIN-205ENST00000536255 REREQ9P2R6 1566 aa21.1■□□□□ 0.97
RPAIN-205ENST00000536255 SPAG9O60271 1321 aaKnown RBP21.1■□□□□ 0.97
RPAIN-205ENST00000536255 CAMSAP2Q08AD1 1489 aa21.1■□□□□ 0.97
RPAIN-205ENST00000536255 MBD5Q9P267 1494 aa21.1■□□□□ 0.97
RPAIN-205ENST00000536255 MADDQ8WXG6 1647 aa21.09■□□□□ 0.97
RPAIN-205ENST00000536255 MYOM3Q5VTT5 1437 aa21.08■□□□□ 0.97
RPAIN-205ENST00000536255 INO80Q9ULG1 1556 aaPredicted RBP21.08■□□□□ 0.97
RPAIN-205ENST00000536255 ATP7AQ04656 1500 aa21.08■□□□□ 0.96
RPAIN-205ENST00000536255 PTPRMP28827 1452 aa21.06■□□□□ 0.96
RPAIN-205ENST00000536255 MIA2Q96PC5 1412 aa21.04■□□□□ 0.96
RPAIN-205ENST00000536255 MLECQ14165 292 aa21.04■□□□□ 0.96
RPAIN-205ENST00000536255 CCDC141Q6ZP82 1450 aa21.04■□□□□ 0.96
RPAIN-205ENST00000536255 AGLP35573 1532 aa21.03■□□□□ 0.96
RPAIN-205ENST00000536255 RSPH4AQ5TD94 716 aa21.01■□□□□ 0.95
RPAIN-205ENST00000536255 RIMS1Q86UR5 1692 aaKnown RBP21.01■□□□□ 0.95
RPAIN-205ENST00000536255 RTEL1-TNFRSF6BF6WH68 1400 aa21.01■□□□□ 0.95
RPAIN-205ENST00000536255 ARHGEF5Q12774 1597 aa21.01■□□□□ 0.95
RPAIN-205ENST00000536255 FER1L4A9Z1Z3 1794 aa20.98■□□□□ 0.95
RPAIN-205ENST00000536255 A2MP01023 1474 aa20.97■□□□□ 0.95
RPAIN-205ENST00000536255 PLXNC1O60486 1568 aa20.97■□□□□ 0.95
RPAIN-205ENST00000536255 ADGBQ8N7X0 1667 aa20.95■□□□□ 0.94
RPAIN-205ENST00000536255 FGD6Q6ZV73 1430 aa20.94■□□□□ 0.94
RPAIN-205ENST00000536255 PTPN23Q9H3S7 1636 aa20.93■□□□□ 0.94
RPAIN-205ENST00000536255 TSPY4P0CV99 314 aa20.92■□□□□ 0.94
RPAIN-205ENST00000536255 TSPY10P0CW01 314 aa20.92■□□□□ 0.94
RPAIN-205ENST00000536255 MAST1Q9Y2H9 1570 aa20.9■□□□□ 0.94
RPAIN-205ENST00000536255 TCOF1Q13428 1488 aaKnown RBP20.9■□□□□ 0.94
RPAIN-205ENST00000536255 DHX29Q7Z478 1369 aaKnown RBP20.89■□□□□ 0.93
RPAIN-205ENST00000536255 PLPPR3Q6T4P5 718 aa20.87■□□□□ 0.93
RPAIN-205ENST00000536255 ESF1Q9H501 851 aaKnown RBP20.86■□□□□ 0.93
RPAIN-205ENST00000536255 CNTLNQ9NXG0 1405 aa20.86■□□□□ 0.93
RPAIN-205ENST00000536255 SHANK2Q9UPX8 1470 aa20.84■□□□□ 0.93
RPAIN-205ENST00000536255 ABCC5O15440 1437 aa20.84■□□□□ 0.93
RPAIN-205ENST00000536255 DNMT1P26358 1616 aaKnown RBP20.83■□□□□ 0.93
RPAIN-205ENST00000536255 CEBPAP49715 358 aaPredicted RBP20.83■□□□□ 0.93
RPAIN-205ENST00000536255 DAPK1P53355 1430 aa20.83■□□□□ 0.93
RPAIN-205ENST00000536255 CROCC2H7BZ55 1655 aa20.83■□□□□ 0.92
RPAIN-205ENST00000536255 GGT6Q6P531 493 aa20.82■□□□□ 0.92
RPAIN-205ENST00000536255 PPARGC1BQ86YN6 1023 aaKnown RBP20.82■□□□□ 0.92
RPAIN-205ENST00000536255 LMTK3Q96Q04 1460 aa20.81■□□□□ 0.92
RPAIN-205ENST00000536255 KIF3BO15066 747 aa20.79■□□□□ 0.92
RPAIN-205ENST00000536255 PPP6R1Q9UPN7 881 aa20.79■□□□□ 0.92
RPAIN-205ENST00000536255 C3P01024 1663 aa20.79■□□□□ 0.92
RPAIN-205ENST00000536255 MROH2AA6NES4 1674 aa20.78■□□□□ 0.92
RPAIN-205ENST00000536255 FAM50AQ14320 339 aaKnown RBP20.77■□□□□ 0.92
RPAIN-205ENST00000536255 CLTCQ00610 1675 aaKnown RBP20.76■□□□□ 0.91
RPAIN-205ENST00000536255 ZMYM3Q14202 1370 aa20.75■□□□□ 0.91
RPAIN-205ENST00000536255 KIF15Q9NS87 1388 aa20.75■□□□□ 0.91
RPAIN-205ENST00000536255 DUOX2Q9NRD8 1548 aa20.75■□□□□ 0.91
RPAIN-205ENST00000536255 EIF2AK4Q9P2K8 1649 aaKnown RBP20.74■□□□□ 0.91
RPAIN-205ENST00000536255 FAM135AQ9P2D6 1515 aa20.73■□□□□ 0.91
RPAIN-205ENST00000536255 PREX1Q8TCU6 1659 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms