RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 DENND4BO75064 1496 aaPredicted RBP19.2■□□□□ 0.66
VPS33B-202ENST00000535906 TONSLQ96HA7 1378 aa19.2■□□□□ 0.66
VPS33B-202ENST00000535906 ADCY10Q96PN6 1610 aa19.2■□□□□ 0.66
VPS33B-202ENST00000535906 TRIM52Q96A61 297 aa19.19■□□□□ 0.66
VPS33B-202ENST00000535906 GPATCH8Q9UKJ3 1502 aaKnown RBP19.19■□□□□ 0.66
VPS33B-202ENST00000535906 CHD1O14646 1710 aa19.19■□□□□ 0.66
VPS33B-202ENST00000535906 ROCK1Q13464 1354 aa19.18■□□□□ 0.66
VPS33B-202ENST00000535906 CFDP1Q9UEE9 299 aaPredicted RBP19.18■□□□□ 0.66
VPS33B-202ENST00000535906 ATP10BO94823 1461 aa19.17■□□□□ 0.66
VPS33B-202ENST00000535906 ITSN2Q9NZM3 1697 aa19.17■□□□□ 0.66
VPS33B-202ENST00000535906 CAMSAP2Q08AD1 1489 aa19.16■□□□□ 0.66
VPS33B-202ENST00000535906 PLEKHD1A6NEE1 506 aa19.15■□□□□ 0.66
VPS33B-202ENST00000535906 MPHOSPH9Q99550 1183 aa19.14■□□□□ 0.65
VPS33B-202ENST00000535906 PTPRGP23470 1445 aa19.13■□□□□ 0.65
VPS33B-202ENST00000535906 ZNF777Q9ULD5 760 aaPredicted RBP19.12■□□□□ 0.65
VPS33B-202ENST00000535906 KDM5BQ9UGL1 1544 aa19.1■□□□□ 0.65
VPS33B-202ENST00000535906 HIRIP3Q9BW71 556 aaPredicted RBP19.1■□□□□ 0.65
VPS33B-202ENST00000535906 ABCC10Q5T3U5 1492 aa19.09■□□□□ 0.65
VPS33B-202ENST00000535906 CDC42BPAQ5VT25 1732 aa19.08■□□□□ 0.65
VPS33B-202ENST00000535906 FOXD1Q16676 465 aa19.08■□□□□ 0.64
VPS33B-202ENST00000535906 SHROOM2Q13796 1616 aa19.07■□□□□ 0.64
VPS33B-202ENST00000535906 NCOA1Q15788 1441 aa19.07■□□□□ 0.64
VPS33B-202ENST00000535906 DDX10Q13206 875 aaKnown RBP19.05■□□□□ 0.64
VPS33B-202ENST00000535906 CROCC2H7BZ55 1655 aa19.05■□□□□ 0.64
VPS33B-202ENST00000535906 ADGBQ8N7X0 1667 aa19.04■□□□□ 0.64
VPS33B-202ENST00000535906 ADGRL2O95490 1459 aa19.02■□□□□ 0.64
VPS33B-202ENST00000535906 ERCC6L2Q5T890 1561 aa19.02■□□□□ 0.63
VPS33B-202ENST00000535906 ANKRD30BQ9BXX2 1392 aa19.01■□□□□ 0.63
VPS33B-202ENST00000535906 SLC4A1APQ9BWU0 796 aaKnown RBP19■□□□□ 0.63
VPS33B-202ENST00000535906 ANKRD30AQ9BXX3 1397 aa18.98■□□□□ 0.63
VPS33B-202ENST00000535906 PZPP20742 1482 aa18.97■□□□□ 0.63
VPS33B-202ENST00000535906 L3MBTL2Q969R5 705 aa18.96■□□□□ 0.63
VPS33B-202ENST00000535906 RPRD2Q5VT52 1461 aaKnown RBP18.95■□□□□ 0.62
VPS33B-202ENST00000535906 C9orf84Q5VXU9 1444 aa18.94■□□□□ 0.62
VPS33B-202ENST00000535906 HNRNPMP52272 730 aaKnown RBP eCLIP18.94■□□□□ 0.62
VPS33B-202ENST00000535906 SHANK2Q9UPX8 1470 aa18.94■□□□□ 0.62
VPS33B-202ENST00000535906 ANKRD50Q9ULJ7 1429 aa18.93■□□□□ 0.62
VPS33B-202ENST00000535906 CDC42BPBQ9Y5S2 1711 aa18.93■□□□□ 0.62
VPS33B-202ENST00000535906 KCNH8Q96L42 1107 aa18.93■□□□□ 0.62
VPS33B-202ENST00000535906 ABCC2Q92887 1545 aa18.92■□□□□ 0.62
VPS33B-202ENST00000535906 MBD5Q9P267 1494 aa18.92■□□□□ 0.62
VPS33B-202ENST00000535906 CLASP1Q7Z460 1538 aa18.92■□□□□ 0.62
VPS33B-202ENST00000535906 TSPY4P0CV99 314 aa18.91■□□□□ 0.62
VPS33B-202ENST00000535906 TSPY10P0CW01 314 aa18.91■□□□□ 0.62
VPS33B-202ENST00000535906 PREX2Q70Z35 1606 aa18.91■□□□□ 0.62
VPS33B-202ENST00000535906 SAMD9LQ8IVG5 1584 aa18.9■□□□□ 0.62
VPS33B-202ENST00000535906 ARHGEF5Q12774 1597 aa18.89■□□□□ 0.62
VPS33B-202ENST00000535906 TEX14Q8IWB6 1497 aa18.89■□□□□ 0.61
VPS33B-202ENST00000535906 TTC37Q6PGP7 1564 aa18.88■□□□□ 0.61
VPS33B-202ENST00000535906 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.87■□□□□ 0.61
VPS33B-202ENST00000535906 HSPA5P11021 654 aaKnown RBP18.87■□□□□ 0.61
VPS33B-202ENST00000535906 KIAA1107Q9UPP5 1409 aa18.86■□□□□ 0.61
VPS33B-202ENST00000535906 PKD2Q13563 968 aa18.86■□□□□ 0.61
VPS33B-202ENST00000535906 NBPF8Q3BBV2 869 aa18.85■□□□□ 0.61
VPS33B-202ENST00000535906 KIF15Q9NS87 1388 aa18.85■□□□□ 0.61
VPS33B-202ENST00000535906 CCDC141Q6ZP82 1450 aa18.84■□□□□ 0.61
VPS33B-202ENST00000535906 NUP155O75694 1391 aa18.83■□□□□ 0.61
VPS33B-202ENST00000535906 EIF4G2P78344 907 aaKnown RBP eCLIP18.83■□□□□ 0.61
VPS33B-202ENST00000535906 ARHGAP5Q13017 1502 aa18.83■□□□□ 0.6
VPS33B-202ENST00000535906 RSPH4AQ5TD94 716 aa18.82■□□□□ 0.6
VPS33B-202ENST00000535906 SYCP2Q9BX26 1530 aa18.81■□□□□ 0.6
VPS33B-202ENST00000535906 ANP32CO43423 234 aa18.81■□□□□ 0.6
VPS33B-202ENST00000535906 ZCCHC11Q5TAX3 1644 aaKnown RBP18.8■□□□□ 0.6
VPS33B-202ENST00000535906 WASHC2AQ641Q2 1341 aa18.8■□□□□ 0.6
VPS33B-202ENST00000535906 UHRF1BP1LA0JNW5 1464 aa18.79■□□□□ 0.6
VPS33B-202ENST00000535906 MYO5CQ9NQX4 1742 aa18.79■□□□□ 0.6
VPS33B-202ENST00000535906 KDM5DQ9BY66 1539 aa18.78■□□□□ 0.6
VPS33B-202ENST00000535906 CCER2I3L3R5 266 aa18.75■□□□□ 0.59
VPS33B-202ENST00000535906 MAST1Q9Y2H9 1570 aa18.74■□□□□ 0.59
VPS33B-202ENST00000535906 C11orf95C9JLR9 678 aaPredicted RBP18.73■□□□□ 0.59
VPS33B-202ENST00000535906 PLCH2O75038 1416 aa18.73■□□□□ 0.59
VPS33B-202ENST00000535906 ARHGEF12Q9NZN5 1544 aa18.72■□□□□ 0.59
VPS33B-202ENST00000535906 SPATA31E1Q6ZUB1 1445 aa18.72■□□□□ 0.59
VPS33B-202ENST00000535906 PLEKHH2Q8IVE3 1493 aa18.72■□□□□ 0.59
VPS33B-202ENST00000535906 FAM135AQ9P2D6 1515 aa18.7■□□□□ 0.58
VPS33B-202ENST00000535906 SUPT16HQ9Y5B9 1047 aaKnown RBP18.69■□□□□ 0.58
VPS33B-202ENST00000535906 CCDC7Q96M83 1385 aa18.68■□□□□ 0.58
VPS33B-202ENST00000535906 EFCAB2Q5VUJ9 269 aa18.68■□□□□ 0.58
VPS33B-202ENST00000535906 PLXNC1O60486 1568 aa18.67■□□□□ 0.58
VPS33B-202ENST00000535906 ZNF326Q5BKZ1 582 aaKnown RBP18.67■□□□□ 0.58
VPS33B-202ENST00000535906 CNTLNQ9NXG0 1405 aa18.64■□□□□ 0.58
VPS33B-202ENST00000535906 UNC13BO14795 1591 aa18.64■□□□□ 0.57
VPS33B-202ENST00000535906 ABCC1P33527 1531 aa18.64■□□□□ 0.57
VPS33B-202ENST00000535906 UHRF1BP1Q6BDS2 1440 aa18.63■□□□□ 0.57
VPS33B-202ENST00000535906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.63■□□□□ 0.57
VPS33B-202ENST00000535906 TRAPPC8Q9Y2L5 1435 aa18.62■□□□□ 0.57
VPS33B-202ENST00000535906 KIF7Q2M1P5 1343 aa18.62■□□□□ 0.57
VPS33B-202ENST00000535906 DUOX2Q9NRD8 1548 aa18.61■□□□□ 0.57
VPS33B-202ENST00000535906 POLR1AO95602 1720 aaPredicted RBP18.61■□□□□ 0.57
VPS33B-202ENST00000535906 USP47Q96K76 1375 aa18.6■□□□□ 0.57
VPS33B-202ENST00000535906 WDR7Q9Y4E6 1490 aa18.6■□□□□ 0.57
VPS33B-202ENST00000535906 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
VPS33B-202ENST00000535906 DCAF11Q8TEB1 546 aa18.58■□□□□ 0.57
VPS33B-202ENST00000535906 IQGAP3Q86VI3 1631 aa18.58■□□□□ 0.56
VPS33B-202ENST00000535906 ERBINQ96RT1 1412 aa18.58■□□□□ 0.56
VPS33B-202ENST00000535906 ARAP3Q8WWN8 1544 aa18.58■□□□□ 0.56
VPS33B-202ENST00000535906 PLA2R1Q13018 1463 aa18.57■□□□□ 0.56
VPS33B-202ENST00000535906 RALGAPBQ86X10 1494 aa18.57■□□□□ 0.56
VPS33B-202ENST00000535906 KDM5CP41229 1560 aa18.57■□□□□ 0.56
VPS33B-202ENST00000535906 AFAP1Q8N556 730 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms