RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 ABCC5O15440 1437 aa19.54■□□□□ 0.72
BEST1-208ENST00000534553 ZNF316A6NFI3 1004 aaPredicted RBP19.53■□□□□ 0.72
BEST1-208ENST00000534553 CDC42BPAQ5VT25 1732 aa19.51■□□□□ 0.71
BEST1-208ENST00000534553 ADGRL2O95490 1459 aa19.49■□□□□ 0.71
BEST1-208ENST00000534553 SHANK2Q9UPX8 1470 aa19.49■□□□□ 0.71
BEST1-208ENST00000534553 KDM5BQ9UGL1 1544 aa19.49■□□□□ 0.71
BEST1-208ENST00000534553 CHIC2Q9UKJ5 165 aa19.47■□□□□ 0.71
BEST1-208ENST00000534553 CROCC2H7BZ55 1655 aa19.47■□□□□ 0.71
BEST1-208ENST00000534553 ADGBQ8N7X0 1667 aa19.47■□□□□ 0.71
BEST1-208ENST00000534553 RRP7BPQ9NSQ0 103 aa19.46■□□□□ 0.71
BEST1-208ENST00000534553 ZNF644Q9H582 1327 aaPredicted RBP19.46■□□□□ 0.71
BEST1-208ENST00000534553 PREX2Q70Z35 1606 aa19.46■□□□□ 0.71
BEST1-208ENST00000534553 ARHGEF5Q12774 1597 aa19.44■□□□□ 0.7
BEST1-208ENST00000534553 RSPH4AQ5TD94 716 aa19.43■□□□□ 0.7
BEST1-208ENST00000534553 ZCCHC11Q5TAX3 1644 aaKnown RBP19.43■□□□□ 0.7
BEST1-208ENST00000534553 ANKRD30AQ9BXX3 1397 aa19.42■□□□□ 0.7
BEST1-208ENST00000534553 NCOA1Q15788 1441 aa19.42■□□□□ 0.7
BEST1-208ENST00000534553 OSCARQ8IYS5 282 aa19.41■□□□□ 0.7
BEST1-208ENST00000534553 ZNF777Q9ULD5 760 aaPredicted RBP19.41■□□□□ 0.7
BEST1-208ENST00000534553 PLEKHH2Q8IVE3 1493 aa19.4■□□□□ 0.7
BEST1-208ENST00000534553 DIEXFQ68CQ4 756 aaKnown RBP19.39■□□□□ 0.7
BEST1-208ENST00000534553 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.39■□□□□ 0.69
BEST1-208ENST00000534553 CDC42BPBQ9Y5S2 1711 aa19.37■□□□□ 0.69
BEST1-208ENST00000534553 TTC37Q6PGP7 1564 aa19.36■□□□□ 0.69
BEST1-208ENST00000534553 MYO5CQ9NQX4 1742 aa19.36■□□□□ 0.69
BEST1-208ENST00000534553 TSPY4P0CV99 314 aa19.36■□□□□ 0.69
BEST1-208ENST00000534553 TSPY10P0CW01 314 aa19.36■□□□□ 0.69
BEST1-208ENST00000534553 C9orf84Q5VXU9 1444 aa19.36■□□□□ 0.69
BEST1-208ENST00000534553 KDM6BO15054 1643 aa19.36■□□□□ 0.69
BEST1-208ENST00000534553 CCDC141Q6ZP82 1450 aa19.36■□□□□ 0.69
BEST1-208ENST00000534553 MBD5Q9P267 1494 aa19.35■□□□□ 0.69
BEST1-208ENST00000534553 SAMD9LQ8IVG5 1584 aa19.35■□□□□ 0.69
BEST1-208ENST00000534553 KIAA1107Q9UPP5 1409 aa19.35■□□□□ 0.69
BEST1-208ENST00000534553 TRIM52Q96A61 297 aa19.35■□□□□ 0.69
BEST1-208ENST00000534553 ARHGAP5Q13017 1502 aa19.34■□□□□ 0.69
BEST1-208ENST00000534553 ARAP3Q8WWN8 1544 aa19.33■□□□□ 0.69
BEST1-208ENST00000534553 SIN3AQ96ST3 1273 aa19.33■□□□□ 0.69
BEST1-208ENST00000534553 TONSLQ96HA7 1378 aa19.32■□□□□ 0.68
BEST1-208ENST00000534553 NEUROD1Q13562 356 aa19.32■□□□□ 0.68
BEST1-208ENST00000534553 MPHOSPH9Q99550 1183 aa19.32■□□□□ 0.68
BEST1-208ENST00000534553 PLCH2O75038 1416 aa19.32■□□□□ 0.68
BEST1-208ENST00000534553 ANKRD50Q9ULJ7 1429 aa19.3■□□□□ 0.68
BEST1-208ENST00000534553 MAST1Q9Y2H9 1570 aa19.3■□□□□ 0.68
BEST1-208ENST00000534553 WDR7Q9Y4E6 1490 aa19.29■□□□□ 0.68
BEST1-208ENST00000534553 DENND4BO75064 1496 aaPredicted RBP19.28■□□□□ 0.68
BEST1-208ENST00000534553 PPP1R15AO75807 674 aaPredicted RBP19.26■□□□□ 0.67
BEST1-208ENST00000534553 SYCP2Q9BX26 1530 aa19.26■□□□□ 0.67
BEST1-208ENST00000534553 EFCAB2Q5VUJ9 269 aa19.25■□□□□ 0.67
BEST1-208ENST00000534553 HNRNPMP52272 730 aaKnown RBP eCLIP19.24■□□□□ 0.67
BEST1-208ENST00000534553 KIF15Q9NS87 1388 aa19.24■□□□□ 0.67
BEST1-208ENST00000534553 KCNH8Q96L42 1107 aa19.23■□□□□ 0.67
BEST1-208ENST00000534553 KDM5DQ9BY66 1539 aa19.23■□□□□ 0.67
BEST1-208ENST00000534553 SLC4A1APQ9BWU0 796 aaKnown RBP19.22■□□□□ 0.67
BEST1-208ENST00000534553 PLXNC1O60486 1568 aa19.22■□□□□ 0.67
BEST1-208ENST00000534553 PZPP20742 1482 aa19.22■□□□□ 0.67
BEST1-208ENST00000534553 ANKRD30BQ9BXX2 1392 aa19.21■□□□□ 0.67
BEST1-208ENST00000534553 ABCC1P33527 1531 aa19.21■□□□□ 0.66
BEST1-208ENST00000534553 ABCA9Q8IUA7 1624 aa19.2■□□□□ 0.66
BEST1-208ENST00000534553 RPRD2Q5VT52 1461 aaKnown RBP19.19■□□□□ 0.66
BEST1-208ENST00000534553 NPM1P06748 294 aaKnown RBP eCLIP19.18■□□□□ 0.66
BEST1-208ENST00000534553 ASXL2Q76L83 1435 aa19.17■□□□□ 0.66
BEST1-208ENST00000534553 DUOX2Q9NRD8 1548 aa19.14■□□□□ 0.65
BEST1-208ENST00000534553 RTEL1-TNFRSF6BF6WH68 1400 aa19.13■□□□□ 0.65
BEST1-208ENST00000534553 NUP155O75694 1391 aa19.13■□□□□ 0.65
BEST1-208ENST00000534553 ERBINQ96RT1 1412 aa19.13■□□□□ 0.65
BEST1-208ENST00000534553 ARHGEF12Q9NZN5 1544 aa19.12■□□□□ 0.65
BEST1-208ENST00000534553 FANCAO15360 1455 aa19.11■□□□□ 0.65
BEST1-208ENST00000534553 UNC13BO14795 1591 aa19.1■□□□□ 0.65
BEST1-208ENST00000534553 PKD2Q13563 968 aa19.07■□□□□ 0.64
BEST1-208ENST00000534553 TEX14Q8IWB6 1497 aa19.07■□□□□ 0.64
BEST1-208ENST00000534553 CFAP74Q9C0B2 1584 aa19.07■□□□□ 0.64
BEST1-208ENST00000534553 FOXD1Q16676 465 aa19.06■□□□□ 0.64
BEST1-208ENST00000534553 FAM135AQ9P2D6 1515 aa19.05■□□□□ 0.64
BEST1-208ENST00000534553 TRAPPC8Q9Y2L5 1435 aa19.05■□□□□ 0.64
BEST1-208ENST00000534553 MAGI2Q86UL8 1455 aa19.05■□□□□ 0.64
BEST1-208ENST00000534553 SPAG9O60271 1321 aaKnown RBP19.04■□□□□ 0.64
BEST1-208ENST00000534553 ZFYVE16Q7Z3T8 1539 aa19.04■□□□□ 0.64
BEST1-208ENST00000534553 ADGRL1O94910 1474 aa19.03■□□□□ 0.64
BEST1-208ENST00000534553 L3MBTL2Q969R5 705 aa19.03■□□□□ 0.64
BEST1-208ENST00000534553 IQGAP3Q86VI3 1631 aa19.02■□□□□ 0.64
BEST1-208ENST00000534553 INO80Q9ULG1 1556 aaPredicted RBP19■□□□□ 0.63
BEST1-208ENST00000534553 ATP7AQ04656 1500 aa18.99■□□□□ 0.63
BEST1-208ENST00000534553 SCAPERQ9BY12 1400 aa18.98■□□□□ 0.63
BEST1-208ENST00000534553 CD109Q6YHK3 1445 aa18.98■□□□□ 0.63
BEST1-208ENST00000534553 MIER1Q8N108 512 aa18.97■□□□□ 0.63
BEST1-208ENST00000534553 ZNF518AQ6AHZ1 1483 aa18.97■□□□□ 0.63
BEST1-208ENST00000534553 AFAP1Q8N556 730 aa18.94■□□□□ 0.62
BEST1-208ENST00000534553 EIF2AK4Q9P2K8 1649 aaKnown RBP18.94■□□□□ 0.62
BEST1-208ENST00000534553 ATP10AO60312 1499 aa18.94■□□□□ 0.62
BEST1-208ENST00000534553 NEO1Q92859 1461 aa18.93■□□□□ 0.62
BEST1-208ENST00000534553 EIF4G2P78344 907 aaKnown RBP eCLIP18.93■□□□□ 0.62
BEST1-208ENST00000534553 DEPDC5O75140 1603 aa18.92■□□□□ 0.62
BEST1-208ENST00000534553 CCDC144AA2RUR9 1427 aa18.91■□□□□ 0.62
BEST1-208ENST00000534553 UHRF1BP1Q6BDS2 1440 aa18.91■□□□□ 0.62
BEST1-208ENST00000534553 CENPBP07199 599 aaPredicted RBP18.9■□□□□ 0.62
BEST1-208ENST00000534553 RIMBP3CA6NJZ7 1639 aa18.9■□□□□ 0.62
BEST1-208ENST00000534553 RIMBP3BA6NNM3 1639 aa18.9■□□□□ 0.62
BEST1-208ENST00000534553 RIMBP3Q9UFD9 1639 aa18.9■□□□□ 0.62
BEST1-208ENST00000534553 KDM5CP41229 1560 aa18.9■□□□□ 0.62
BEST1-208ENST00000534553 DHX29Q7Z478 1369 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms