RNA–Protein interactions for RNA: ENST00000534011.5

FOXRED1-217, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 1,955 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-217ENST00000534011 PRKRIP1Q9H875 184 aaPredicted RBP19.13■□□□□ 0.65
FOXRED1-217ENST00000534011 ADAMTS12P58397 1594 aa19.13■□□□□ 0.65
FOXRED1-217ENST00000534011 TEX14Q8IWB6 1497 aa19.13■□□□□ 0.65
FOXRED1-217ENST00000534011 PPP4R2Q9NY27 417 aa19.12■□□□□ 0.65
FOXRED1-217ENST00000534011 CDK13Q14004 1512 aaKnown RBP19.12■□□□□ 0.65
FOXRED1-217ENST00000534011 DNMT1P26358 1616 aaKnown RBP19.12■□□□□ 0.65
FOXRED1-217ENST00000534011 DAPK1P53355 1430 aa19.11■□□□□ 0.65
FOXRED1-217ENST00000534011 SPATA31E1Q6ZUB1 1445 aa19.11■□□□□ 0.65
FOXRED1-217ENST00000534011 ZBED9Q6R2W3 1325 aa19.11■□□□□ 0.65
FOXRED1-217ENST00000534011 MSH5O43196 834 aa19.1■□□□□ 0.65
FOXRED1-217ENST00000534011 DNAJC5BQ9UF47 199 aa19.1■□□□□ 0.65
FOXRED1-217ENST00000534011 IRX6P78412 446 aaPredicted RBP19.09■□□□□ 0.65
FOXRED1-217ENST00000534011 C11orf95C9JLR9 678 aaPredicted RBP19.06■□□□□ 0.64
FOXRED1-217ENST00000534011 BCL11AQ9H165 835 aa19.06■□□□□ 0.64
FOXRED1-217ENST00000534011 ABCC5O15440 1437 aa19.06■□□□□ 0.64
FOXRED1-217ENST00000534011 CCDC184Q52MB2 194 aa19.04■□□□□ 0.64
FOXRED1-217ENST00000534011 NBPF8Q3BBV2 869 aa19.03■□□□□ 0.64
FOXRED1-217ENST00000534011 MRS2Q9HD23 443 aa19.03■□□□□ 0.64
FOXRED1-217ENST00000534011 KIF7Q2M1P5 1343 aa19.02■□□□□ 0.63
FOXRED1-217ENST00000534011 MBD5Q9P267 1494 aa18.99■□□□□ 0.63
FOXRED1-217ENST00000534011 KIAA0556O60303 1618 aa18.99■□□□□ 0.63
FOXRED1-217ENST00000534011 FOXD1Q16676 465 aa18.99■□□□□ 0.63
FOXRED1-217ENST00000534011 KIAA0586Q9BVV6 1533 aa18.98■□□□□ 0.63
FOXRED1-217ENST00000534011 FAM9BQ8IZU0 186 aa18.97■□□□□ 0.63
FOXRED1-217ENST00000534011 SLC4A1APQ9BWU0 796 aaKnown RBP18.97■□□□□ 0.63
FOXRED1-217ENST00000534011 NUP153P49790 1475 aaKnown RBP18.97■□□□□ 0.63
FOXRED1-217ENST00000534011 ARID4BQ4LE39 1312 aaPredicted RBP18.97■□□□□ 0.63
FOXRED1-217ENST00000534011 PZPP20742 1482 aa18.97■□□□□ 0.63
FOXRED1-217ENST00000534011 DISP1Q96F81 1524 aa18.97■□□□□ 0.63
FOXRED1-217ENST00000534011 RAPGEF6Q8TEU7 1601 aa18.96■□□□□ 0.63
FOXRED1-217ENST00000534011 ADGBQ8N7X0 1667 aa18.95■□□□□ 0.62
FOXRED1-217ENST00000534011 SMG6Q86US8 1419 aaKnown RBP18.95■□□□□ 0.62
FOXRED1-217ENST00000534011 ADGRL2O95490 1459 aa18.94■□□□□ 0.62
FOXRED1-217ENST00000534011 DHX29Q7Z478 1369 aaKnown RBP18.93■□□□□ 0.62
FOXRED1-217ENST00000534011 MRC2Q9UBG0 1479 aa18.93■□□□□ 0.62
FOXRED1-217ENST00000534011 ITSN2Q9NZM3 1697 aa18.93■□□□□ 0.62
FOXRED1-217ENST00000534011 ERICH6Q7L0X2 663 aa18.93■□□□□ 0.62
FOXRED1-217ENST00000534011 MYT1LQ9UL68 1186 aa18.93■□□□□ 0.62
FOXRED1-217ENST00000534011 KIAA1107Q9UPP5 1409 aa18.92■□□□□ 0.62
FOXRED1-217ENST00000534011 KIF14Q15058 1648 aa18.91■□□□□ 0.62
FOXRED1-217ENST00000534011 TROQ12816 1431 aaPredicted RBP18.91■□□□□ 0.62
FOXRED1-217ENST00000534011 RNF123Q5XPI4 1314 aa18.9■□□□□ 0.62
FOXRED1-217ENST00000534011 CAMSAP2Q08AD1 1489 aa18.9■□□□□ 0.62
FOXRED1-217ENST00000534011 IFT140Q96RY7 1462 aa18.9■□□□□ 0.62
FOXRED1-217ENST00000534011 ADCY10Q96PN6 1610 aa18.89■□□□□ 0.62
FOXRED1-217ENST00000534011 ZNF644Q9H582 1327 aaPredicted RBP18.89■□□□□ 0.61
FOXRED1-217ENST00000534011 CROCC2H7BZ55 1655 aa18.89■□□□□ 0.61
FOXRED1-217ENST00000534011 ROCK2O75116 1388 aaKnown RBP18.87■□□□□ 0.61
FOXRED1-217ENST00000534011 KDM5CP41229 1560 aa18.87■□□□□ 0.61
FOXRED1-217ENST00000534011 UHRF1BP1Q6BDS2 1440 aa18.87■□□□□ 0.61
FOXRED1-217ENST00000534011 B4GALNT3Q6L9W6 998 aa18.87■□□□□ 0.61
FOXRED1-217ENST00000534011 USP47Q96K76 1375 aa18.87■□□□□ 0.61
FOXRED1-217ENST00000534011 BCORL1Q5H9F3 1711 aa18.86■□□□□ 0.61
FOXRED1-217ENST00000534011 NUDCQ9Y266 331 aa18.85■□□□□ 0.61
FOXRED1-217ENST00000534011 GPATCH8Q9UKJ3 1502 aaKnown RBP18.85■□□□□ 0.61
FOXRED1-217ENST00000534011 ARID3CA6NKF2 412 aa18.84■□□□□ 0.61
FOXRED1-217ENST00000534011 GRIN2AQ12879 1464 aa18.83■□□□□ 0.61
FOXRED1-217ENST00000534011 RALGAPBQ86X10 1494 aa18.83■□□□□ 0.61
FOXRED1-217ENST00000534011 ARHGEF12Q9NZN5 1544 aa18.83■□□□□ 0.61
FOXRED1-217ENST00000534011 CFDP1Q9UEE9 299 aaPredicted RBP18.82■□□□□ 0.6
FOXRED1-217ENST00000534011 ANKRD30AQ9BXX3 1397 aa18.82■□□□□ 0.6
FOXRED1-217ENST00000534011 PRG4Q92954 1404 aaPredicted RBP18.81■□□□□ 0.6
FOXRED1-217ENST00000534011 KTN1Q86UP2 1357 aaKnown RBP18.8■□□□□ 0.6
FOXRED1-217ENST00000534011 SHANK2Q9UPX8 1470 aa18.79■□□□□ 0.6
FOXRED1-217ENST00000534011 ZNF608Q9ULD9 1512 aaPredicted RBP18.79■□□□□ 0.6
FOXRED1-217ENST00000534011 KDM5DQ9BY66 1539 aa18.78■□□□□ 0.6
FOXRED1-217ENST00000534011 ANKRD50Q9ULJ7 1429 aa18.77■□□□□ 0.6
FOXRED1-217ENST00000534011 PKD2Q13563 968 aa18.77■□□□□ 0.59
FOXRED1-217ENST00000534011 PNISRQ8TF01 805 aaKnown RBP18.77■□□□□ 0.59
FOXRED1-217ENST00000534011 KIF15Q9NS87 1388 aa18.75■□□□□ 0.59
FOXRED1-217ENST00000534011 LRPPRCP42704 1394 aaKnown RBP18.74■□□□□ 0.59
FOXRED1-217ENST00000534011 BRD4O60885 1362 aaPredicted RBP18.73■□□□□ 0.59
FOXRED1-217ENST00000534011 MAGI1Q96QZ7 1491 aaPredicted RBP18.73■□□□□ 0.59
FOXRED1-217ENST00000534011 EIF4G3O43432 1585 aaKnown RBP18.72■□□□□ 0.59
FOXRED1-217ENST00000534011 NOP58Q9Y2X3 529 aaKnown RBP18.72■□□□□ 0.59
FOXRED1-217ENST00000534011 PLB1Q6P1J6 1458 aa18.71■□□□□ 0.59
FOXRED1-217ENST00000534011 CCDC136Q96JN2 1154 aa18.71■□□□□ 0.59
FOXRED1-217ENST00000534011 CEP170Q5SW79 1584 aa18.7■□□□□ 0.58
FOXRED1-217ENST00000534011 TMC1Q8TDI8 760 aa18.7■□□□□ 0.58
FOXRED1-217ENST00000534011 E9PCH4 1651 aa18.7■□□□□ 0.58
FOXRED1-217ENST00000534011 PTPRGP23470 1445 aa18.7■□□□□ 0.58
FOXRED1-217ENST00000534011 RALBP1Q15311 655 aa18.7■□□□□ 0.58
FOXRED1-217ENST00000534011 CDC42BPAQ5VT25 1732 aa18.7■□□□□ 0.58
FOXRED1-217ENST00000534011 CARMIL2Q6F5E8 1435 aa18.69■□□□□ 0.58
FOXRED1-217ENST00000534011 C9orf84Q5VXU9 1444 aa18.68■□□□□ 0.58
FOXRED1-217ENST00000534011 ABCC10Q5T3U5 1492 aa18.68■□□□□ 0.58
FOXRED1-217ENST00000534011 CARD11Q9BXL7 1154 aa18.68■□□□□ 0.58
FOXRED1-217ENST00000534011 MYBBP1AQ9BQG0 1328 aaKnown RBP18.67■□□□□ 0.58
FOXRED1-217ENST00000534011 NUP155O75694 1391 aa18.67■□□□□ 0.58
FOXRED1-217ENST00000534011 ZNF326Q5BKZ1 582 aaKnown RBP18.67■□□□□ 0.58
FOXRED1-217ENST00000534011 SYNJ2O15056 1496 aa18.66■□□□□ 0.58
FOXRED1-217ENST00000534011 ARHGEF5Q12774 1597 aa18.65■□□□□ 0.58
FOXRED1-217ENST00000534011 POLR3GLQ9BT43 218 aa18.65■□□□□ 0.58
FOXRED1-217ENST00000534011 ZNF777Q9ULD5 760 aaPredicted RBP18.64■□□□□ 0.58
FOXRED1-217ENST00000534011 ERCC6Q03468 1493 aa18.64■□□□□ 0.57
FOXRED1-217ENST00000534011 ABCA8O94911 1581 aa18.64■□□□□ 0.57
FOXRED1-217ENST00000534011 ANP32AP39687 249 aaKnown RBP18.63■□□□□ 0.57
FOXRED1-217ENST00000534011 NUP160Q12769 1436 aa18.62■□□□□ 0.57
FOXRED1-217ENST00000534011 CNGB1Q14028 1251 aaPredicted RBP18.62■□□□□ 0.57
FOXRED1-217ENST00000534011 IPO9Q96P70 1041 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms