RNA–Protein interactions for RNA: ENST00000533194.5

CCT3-216, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 3

Gene CCT3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-216ENST00000533194 YEATS2Q9ULM3 1422 aa11.91□□□□□ -0.5
CCT3-216ENST00000533194 CDK13Q14004 1512 aaKnown RBP11.91□□□□□ -0.5
CCT3-216ENST00000533194 RIMS1Q86UR5 1692 aaKnown RBP11.91□□□□□ -0.5
CCT3-216ENST00000533194 PLCH2O75038 1416 aa11.9□□□□□ -0.5
CCT3-216ENST00000533194 TTC37Q6PGP7 1564 aa11.9□□□□□ -0.5
CCT3-216ENST00000533194 RICTORQ6R327 1708 aa11.89□□□□□ -0.51
CCT3-216ENST00000533194 CLIP1P30622 1438 aa11.89□□□□□ -0.51
CCT3-216ENST00000533194 C9orf84Q5VXU9 1444 aa11.88□□□□□ -0.51
CCT3-216ENST00000533194 ESF1Q9H501 851 aaKnown RBP11.87□□□□□ -0.51
CCT3-216ENST00000533194 ATP10AO60312 1499 aa11.87□□□□□ -0.51
CCT3-216ENST00000533194 HECW1Q76N89 1606 aa11.86□□□□□ -0.51
CCT3-216ENST00000533194 ZNF518AQ6AHZ1 1483 aa11.85□□□□□ -0.51
CCT3-216ENST00000533194 CERKQ8TCT0 537 aa11.85□□□□□ -0.51
CCT3-216ENST00000533194 DMRT2Q9Y5R5 561 aa11.85□□□□□ -0.51
CCT3-216ENST00000533194 ARHGAP5Q13017 1502 aa11.85□□□□□ -0.51
CCT3-216ENST00000533194 KIF14Q15058 1648 aa11.84□□□□□ -0.51
CCT3-216ENST00000533194 TROQ12816 1431 aaPredicted RBP11.84□□□□□ -0.51
CCT3-216ENST00000533194 UHRF1BP1Q6BDS2 1440 aa11.82□□□□□ -0.52
CCT3-216ENST00000533194 ARHGEF12Q9NZN5 1544 aa11.81□□□□□ -0.52
CCT3-216ENST00000533194 AFAP1Q8N556 730 aa11.81□□□□□ -0.52
CCT3-216ENST00000533194 ARHGAP35Q9NRY4 1499 aa11.81□□□□□ -0.52
CCT3-216ENST00000533194 FER1L4A9Z1Z3 1794 aa11.8□□□□□ -0.52
CCT3-216ENST00000533194 CEBPAP49715 358 aaPredicted RBP11.8□□□□□ -0.52
CCT3-216ENST00000533194 MYO5CQ9NQX4 1742 aa11.79□□□□□ -0.52
CCT3-216ENST00000533194 CCDC18Q5T9S5 1454 aa11.76□□□□□ -0.53
CCT3-216ENST00000533194 KDM5CP41229 1560 aa11.75□□□□□ -0.53
CCT3-216ENST00000533194 PREX1Q8TCU6 1659 aa11.75□□□□□ -0.53
CCT3-216ENST00000533194 SIGLEC1Q9BZZ2 1709 aa11.75□□□□□ -0.53
CCT3-216ENST00000533194 MLH3Q9UHC1 1453 aa11.75□□□□□ -0.53
CCT3-216ENST00000533194 ZNF777Q9ULD5 760 aaPredicted RBP11.74□□□□□ -0.53
CCT3-216ENST00000533194 CNTLNQ9NXG0 1405 aa11.74□□□□□ -0.53
CCT3-216ENST00000533194 REREQ9P2R6 1566 aa11.73□□□□□ -0.53
CCT3-216ENST00000533194 DIP2CQ9Y2E4 1556 aa11.73□□□□□ -0.53
CCT3-216ENST00000533194 CASKIN1Q8WXD9 1431 aa11.72□□□□□ -0.53
CCT3-216ENST00000533194 DISP3Q9P2K9 1392 aa11.72□□□□□ -0.53
CCT3-216ENST00000533194 AGLP35573 1532 aa11.71□□□□□ -0.53
CCT3-216ENST00000533194 PTPRTO14522 1441 aa11.71□□□□□ -0.53
CCT3-216ENST00000533194 TRAPPC8Q9Y2L5 1435 aa11.71□□□□□ -0.53
CCT3-216ENST00000533194 SPAG9O60271 1321 aaKnown RBP11.71□□□□□ -0.53
CCT3-216ENST00000533194 CHIC1Q5VXU3 224 aa11.71□□□□□ -0.53
CCT3-216ENST00000533194 ABCC1P33527 1531 aa11.7□□□□□ -0.54
CCT3-216ENST00000533194 FYCO1Q9BQS8 1478 aa11.69□□□□□ -0.54
CCT3-216ENST00000533194 PREX2Q70Z35 1606 aa11.68□□□□□ -0.54
CCT3-216ENST00000533194 ABCA6Q8N139 1617 aa11.68□□□□□ -0.54
CCT3-216ENST00000533194 CFDP1Q9UEE9 299 aaPredicted RBP11.67□□□□□ -0.54
CCT3-216ENST00000533194 PLEKHH2Q8IVE3 1493 aa11.67□□□□□ -0.54
CCT3-216ENST00000533194 NPATQ14207 1427 aa11.67□□□□□ -0.54
CCT3-216ENST00000533194 CCNB3Q8WWL7 1395 aa11.66□□□□□ -0.54
CCT3-216ENST00000533194 HNRNPMP52272 730 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCT3-216ENST00000533194 NCOA1Q15788 1441 aa11.65□□□□□ -0.54
CCT3-216ENST00000533194 ZMYM3Q14202 1370 aa11.65□□□□□ -0.55
CCT3-216ENST00000533194 MTUS2Q5JR59 1369 aa11.65□□□□□ -0.55
CCT3-216ENST00000533194 ITSN2Q9NZM3 1697 aa11.64□□□□□ -0.55
CCT3-216ENST00000533194 C3P01024 1663 aa11.63□□□□□ -0.55
CCT3-216ENST00000533194 GGT6Q6P531 493 aa11.63□□□□□ -0.55
CCT3-216ENST00000533194 SYCP2Q9BX26 1530 aa11.63□□□□□ -0.55
CCT3-216ENST00000533194 CDC42BPBQ9Y5S2 1711 aa11.63□□□□□ -0.55
CCT3-216ENST00000533194 IQSEC2Q5JU85 1478 aa11.63□□□□□ -0.55
CCT3-216ENST00000533194 SAMD9LQ8IVG5 1584 aa11.62□□□□□ -0.55
CCT3-216ENST00000533194 KIAA1107Q9UPP5 1409 aa11.62□□□□□ -0.55
CCT3-216ENST00000533194 GPATCH8Q9UKJ3 1502 aaKnown RBP11.62□□□□□ -0.55
CCT3-216ENST00000533194 PKD2Q13563 968 aa11.62□□□□□ -0.55
CCT3-216ENST00000533194 A2MP01023 1474 aa11.62□□□□□ -0.55
CCT3-216ENST00000533194 STRCQ7RTU9 1775 aa11.62□□□□□ -0.55
CCT3-216ENST00000533194 SOCS7O14512 581 aa11.61□□□□□ -0.55
CCT3-216ENST00000533194 NCKAP5LQ9HCH0 1330 aa11.6□□□□□ -0.55
CCT3-216ENST00000533194 ATP7AQ04656 1500 aa11.6□□□□□ -0.55
CCT3-216ENST00000533194 CAMSAP1Q5T5Y3 1602 aa11.6□□□□□ -0.55
CCT3-216ENST00000533194 UBAP1LF5GYI3 381 aa11.6□□□□□ -0.55
CCT3-216ENST00000533194 PPP6R1Q9UPN7 881 aa11.6□□□□□ -0.55
CCT3-216ENST00000533194 KIDINS220Q9ULH0 1771 aa11.59□□□□□ -0.55
CCT3-216ENST00000533194 SPATA31D1Q6ZQQ2 1576 aa11.58□□□□□ -0.55
CCT3-216ENST00000533194 LRRIQ1Q96JM4 1722 aa11.58□□□□□ -0.56
CCT3-216ENST00000533194 MROH2AA6NES4 1674 aa11.58□□□□□ -0.56
CCT3-216ENST00000533194 SETD1BQ9UPS6 1966 aaKnown RBP11.58□□□□□ -0.56
CCT3-216ENST00000533194 PLA2R1Q13018 1463 aa11.57□□□□□ -0.56
CCT3-216ENST00000533194 LTBP4Q8N2S1 1624 aa11.57□□□□□ -0.56
CCT3-216ENST00000533194 ILDR2Q71H61 639 aa11.57□□□□□ -0.56
CCT3-216ENST00000533194 CDC42BPAQ5VT25 1732 aa11.57□□□□□ -0.56
CCT3-216ENST00000533194 ZNF335Q9H4Z2 1342 aaPredicted RBP11.57□□□□□ -0.56
CCT3-216ENST00000533194 PTPRKQ15262 1439 aa11.55□□□□□ -0.56
CCT3-216ENST00000533194 SCAF1Q9H7N4 1312 aaKnown RBP11.55□□□□□ -0.56
CCT3-216ENST00000533194 PLXNC1O60486 1568 aa11.54□□□□□ -0.56
CCT3-216ENST00000533194 INO80Q9ULG1 1556 aaPredicted RBP11.54□□□□□ -0.56
CCT3-216ENST00000533194 SUPT6HQ7KZ85 1726 aaKnown RBP11.54□□□□□ -0.56
CCT3-216ENST00000533194 CEP170BQ9Y4F5 1589 aaPredicted RBP11.54□□□□□ -0.56
CCT3-216ENST00000533194 KIF3BO15066 747 aa11.53□□□□□ -0.56
CCT3-216ENST00000533194 EHBP1L1Q8N3D4 1523 aa11.53□□□□□ -0.56
CCT3-216ENST00000533194 MYO3AQ8NEV4 1616 aa11.53□□□□□ -0.56
CCT3-216ENST00000533194 CLTCQ00610 1675 aaKnown RBP11.52□□□□□ -0.56
CCT3-216ENST00000533194 RTEL1-TNFRSF6BF6WH68 1400 aa11.52□□□□□ -0.56
CCT3-216ENST00000533194 RSPH4AQ5TD94 716 aa11.52□□□□□ -0.57
CCT3-216ENST00000533194 ZNF644Q9H582 1327 aaPredicted RBP11.52□□□□□ -0.57
CCT3-216ENST00000533194 WASHC2CQ9Y4E1 1318 aa11.52□□□□□ -0.57
CCT3-216ENST00000533194 DHX29Q7Z478 1369 aaKnown RBP11.52□□□□□ -0.57
CCT3-216ENST00000533194 TNRQ92752 1358 aa11.52□□□□□ -0.57
CCT3-216ENST00000533194 A2ML1A8K2U0 1454 aa11.51□□□□□ -0.57
CCT3-216ENST00000533194 TCOF1Q13428 1488 aaKnown RBP11.51□□□□□ -0.57
CCT3-216ENST00000533194 TOM1O60784 492 aa11.51□□□□□ -0.57
CCT3-216ENST00000533194 CEP162Q5TB80 1403 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms