RNA–Protein interactions for RNA: ENST00000533110.5

CTSB-227, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-227ENST00000533110 SIGLEC1Q9BZZ2 1709 aa15.8■□□□□ 0.12
CTSB-227ENST00000533110 UHRF1BP1Q6BDS2 1440 aa15.78■□□□□ 0.12
CTSB-227ENST00000533110 HECW1Q76N89 1606 aa15.77■□□□□ 0.12
CTSB-227ENST00000533110 ARHGEF12Q9NZN5 1544 aa15.77■□□□□ 0.11
CTSB-227ENST00000533110 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.76■□□□□ 0.11
CTSB-227ENST00000533110 C9orf84Q5VXU9 1444 aa15.76■□□□□ 0.11
CTSB-227ENST00000533110 CEBPAP49715 358 aaPredicted RBP15.74■□□□□ 0.11
CTSB-227ENST00000533110 ATP10AO60312 1499 aa15.73■□□□□ 0.11
CTSB-227ENST00000533110 SCAPERQ9BY12 1400 aa15.73■□□□□ 0.11
CTSB-227ENST00000533110 STRCQ7RTU9 1775 aa15.72■□□□□ 0.11
CTSB-227ENST00000533110 PTPRTO14522 1441 aa15.71■□□□□ 0.11
CTSB-227ENST00000533110 RANGAP1P46060 587 aaPredicted RBP15.7■□□□□ 0.1
CTSB-227ENST00000533110 IQSEC2Q5JU85 1478 aa15.7■□□□□ 0.1
CTSB-227ENST00000533110 PLCH2O75038 1416 aa15.67■□□□□ 0.1
CTSB-227ENST00000533110 ESF1Q9H501 851 aaKnown RBP15.65■□□□□ 0.1
CTSB-227ENST00000533110 MYT1LQ9UL68 1186 aa15.65■□□□□ 0.1
CTSB-227ENST00000533110 LTBP4Q8N2S1 1624 aa15.65■□□□□ 0.1
CTSB-227ENST00000533110 ZNF518AQ6AHZ1 1483 aa15.64■□□□□ 0.09
CTSB-227ENST00000533110 EFCAB2Q5VUJ9 269 aa15.63■□□□□ 0.09
CTSB-227ENST00000533110 CDK13Q14004 1512 aaKnown RBP15.61■□□□□ 0.09
CTSB-227ENST00000533110 CSRNP3Q8WYN3 585 aa15.6■□□□□ 0.09
CTSB-227ENST00000533110 SETD1BQ9UPS6 1966 aaKnown RBP15.6■□□□□ 0.09
CTSB-227ENST00000533110 NCOA1Q15788 1441 aa15.6■□□□□ 0.09
CTSB-227ENST00000533110 UBAP1LF5GYI3 381 aa15.59■□□□□ 0.09
CTSB-227ENST00000533110 TRAPPC8Q9Y2L5 1435 aa15.59■□□□□ 0.09
CTSB-227ENST00000533110 C3P01024 1663 aa15.58■□□□□ 0.08
CTSB-227ENST00000533110 MYO5CQ9NQX4 1742 aa15.57■□□□□ 0.08
CTSB-227ENST00000533110 KDM5CP41229 1560 aa15.57■□□□□ 0.08
CTSB-227ENST00000533110 REREQ9P2R6 1566 aa15.57■□□□□ 0.08
CTSB-227ENST00000533110 DIP2CQ9Y2E4 1556 aa15.57■□□□□ 0.08
CTSB-227ENST00000533110 ARHGAP5Q13017 1502 aa15.56■□□□□ 0.08
CTSB-227ENST00000533110 AFAP1Q8N556 730 aa15.55■□□□□ 0.08
CTSB-227ENST00000533110 CNTLNQ9NXG0 1405 aa15.54■□□□□ 0.08
CTSB-227ENST00000533110 ATP1B4Q9UN42 357 aaPredicted RBP15.53■□□□□ 0.08
CTSB-227ENST00000533110 CDK11AQ9UQ88 783 aaPredicted RBP15.53■□□□□ 0.08
CTSB-227ENST00000533110 KIF14Q15058 1648 aa15.53■□□□□ 0.08
CTSB-227ENST00000533110 CAMSAP1Q5T5Y3 1602 aa15.53■□□□□ 0.08
CTSB-227ENST00000533110 AGLP35573 1532 aa15.53■□□□□ 0.08
CTSB-227ENST00000533110 ZNF335Q9H4Z2 1342 aaPredicted RBP15.52■□□□□ 0.08
CTSB-227ENST00000533110 ABCA6Q8N139 1617 aa15.51■□□□□ 0.07
CTSB-227ENST00000533110 MLH3Q9UHC1 1453 aa15.5■□□□□ 0.07
CTSB-227ENST00000533110 CLIP1P30622 1438 aa15.5■□□□□ 0.07
CTSB-227ENST00000533110 NPATQ14207 1427 aa15.5■□□□□ 0.07
CTSB-227ENST00000533110 SCAF1Q9H7N4 1312 aaKnown RBP15.48■□□□□ 0.07
CTSB-227ENST00000533110 EEA1Q15075 1411 aa15.48■□□□□ 0.07
CTSB-227ENST00000533110 MED1Q15648 1581 aaPredicted RBP15.48■□□□□ 0.07
CTSB-227ENST00000533110 NCKAP5LQ9HCH0 1330 aa15.47■□□□□ 0.07
CTSB-227ENST00000533110 TROQ12816 1431 aaPredicted RBP15.46■□□□□ 0.07
CTSB-227ENST00000533110 FMN1Q68DA7 1419 aa15.46■□□□□ 0.07
CTSB-227ENST00000533110 PKD2Q13563 968 aa15.45■□□□□ 0.06
CTSB-227ENST00000533110 PHF23Q9BUL5 403 aaPredicted RBP15.44■□□□□ 0.06
CTSB-227ENST00000533110 PLA2R1Q13018 1463 aa15.44■□□□□ 0.06
CTSB-227ENST00000533110 ABCC1P33527 1531 aa15.43■□□□□ 0.06
CTSB-227ENST00000533110 MROH2AA6NES4 1674 aa15.42■□□□□ 0.06
CTSB-227ENST00000533110 ZMYM3Q14202 1370 aa15.42■□□□□ 0.06
CTSB-227ENST00000533110 HSPA1LP34931 641 aa15.42■□□□□ 0.06
CTSB-227ENST00000533110 PIP4K2BP78356 416 aa15.42■□□□□ 0.06
CTSB-227ENST00000533110 PPP6R1Q9UPN7 881 aa15.42■□□□□ 0.06
CTSB-227ENST00000533110 MYO3AQ8NEV4 1616 aa15.4■□□□□ 0.06
CTSB-227ENST00000533110 TCOF1Q13428 1488 aaKnown RBP15.4■□□□□ 0.06
CTSB-227ENST00000533110 ZNF142P52746 1687 aaPredicted RBP15.39■□□□□ 0.05
CTSB-227ENST00000533110 TOM1O60784 492 aa15.39■□□□□ 0.05
CTSB-227ENST00000533110 CEP170BQ9Y4F5 1589 aaPredicted RBP15.39■□□□□ 0.05
CTSB-227ENST00000533110 PREX2Q70Z35 1606 aa15.39■□□□□ 0.05
CTSB-227ENST00000533110 ITSN2Q9NZM3 1697 aa15.38■□□□□ 0.05
CTSB-227ENST00000533110 KIDINS220Q9ULH0 1771 aa15.37■□□□□ 0.05
CTSB-227ENST00000533110 CDC42BPBQ9Y5S2 1711 aa15.37■□□□□ 0.05
CTSB-227ENST00000533110 SUPT6HQ7KZ85 1726 aaKnown RBP15.36■□□□□ 0.05
CTSB-227ENST00000533110 CPS1P31327 1500 aa15.34■□□□□ 0.05
CTSB-227ENST00000533110 CLTCQ00610 1675 aaKnown RBP15.33■□□□□ 0.04
CTSB-227ENST00000533110 PTPRKQ15262 1439 aa15.33■□□□□ 0.04
CTSB-227ENST00000533110 SAMD9LQ8IVG5 1584 aa15.32■□□□□ 0.04
CTSB-227ENST00000533110 SPAG9O60271 1321 aaKnown RBP15.32■□□□□ 0.04
CTSB-227ENST00000533110 ARHGAP35Q9NRY4 1499 aa15.32■□□□□ 0.04
CTSB-227ENST00000533110 UBTFP17480 764 aaKnown RBP15.31■□□□□ 0.04
CTSB-227ENST00000533110 ZNF777Q9ULD5 760 aaPredicted RBP15.3■□□□□ 0.04
CTSB-227ENST00000533110 A2ML1A8K2U0 1454 aa15.29■□□□□ 0.04
CTSB-227ENST00000533110 CCDC18Q5T9S5 1454 aa15.29■□□□□ 0.04
CTSB-227ENST00000533110 SHANK2Q9UPX8 1470 aa15.29■□□□□ 0.04
CTSB-227ENST00000533110 GGT6Q6P531 493 aa15.29■□□□□ 0.04
CTSB-227ENST00000533110 EHMT2Q96KQ7 1210 aa15.29■□□□□ 0.04
CTSB-227ENST00000533110 SYCP2Q9BX26 1530 aa15.28■□□□□ 0.04
CTSB-227ENST00000533110 ATP7AQ04656 1500 aa15.27■□□□□ 0.04
CTSB-227ENST00000533110 A2MP01023 1474 aa15.27■□□□□ 0.04
CTSB-227ENST00000533110 PLXNC1O60486 1568 aa15.27■□□□□ 0.03
CTSB-227ENST00000533110 DNMT1P26358 1616 aaKnown RBP15.25■□□□□ 0.03
CTSB-227ENST00000533110 CDC42BPAQ5VT25 1732 aa15.25■□□□□ 0.03
CTSB-227ENST00000533110 LRRIQ1Q96JM4 1722 aa15.25■□□□□ 0.03
CTSB-227ENST00000533110 POLR1AO95602 1720 aaPredicted RBP15.24■□□□□ 0.03
CTSB-227ENST00000533110 SENP3Q9H4L4 574 aaPredicted RBP15.24■□□□□ 0.03
CTSB-227ENST00000533110 INO80Q9ULG1 1556 aaPredicted RBP15.24■□□□□ 0.03
CTSB-227ENST00000533110 HNRNPMP52272 730 aaKnown RBP eCLIP15.23■□□□□ 0.03
CTSB-227ENST00000533110 NEURL4Q96JN8 1562 aa15.23■□□□□ 0.03
CTSB-227ENST00000533110 PLEKHH2Q8IVE3 1493 aa15.22■□□□□ 0.03
CTSB-227ENST00000533110 TNRQ92752 1358 aa15.22■□□□□ 0.03
CTSB-227ENST00000533110 ANKLE2Q86XL3 938 aa15.21■□□□□ 0.03
CTSB-227ENST00000533110 CASKIN1Q8WXD9 1431 aa15.2■□□□□ 0.02
CTSB-227ENST00000533110 KIAA1107Q9UPP5 1409 aa15.2■□□□□ 0.02
CTSB-227ENST00000533110 VWDEQ8N2E2 1590 aa15.19■□□□□ 0.02
CTSB-227ENST00000533110 NPHP4O75161 1426 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms