RNA–Protein interactions for RNA: ENST00000533110.5

CTSB-227, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-227ENST00000533110 NISCHQ9Y2I1 1504 aa23.7■■□□□ 1.38
CTSB-227ENST00000533110 ABCC9O60706 1549 aa22.06■■□□□ 1.12
CTSB-227ENST00000533110 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
CTSB-227ENST00000533110 DNAJC5BQ9UF47 199 aa21.06■□□□□ 0.96
CTSB-227ENST00000533110 RB1CC1Q8TDY2 1594 aa20.76■□□□□ 0.91
CTSB-227ENST00000533110 NACADO15069 1562 aa20.47■□□□□ 0.87
CTSB-227ENST00000533110 PABPN1Q86U42 306 aaKnown RBP eCLIP20.43■□□□□ 0.86
CTSB-227ENST00000533110 DCAF8L2P0C7V8 631 aa20.3■□□□□ 0.84
CTSB-227ENST00000533110 UNC13AQ9UPW8 1703 aa20.17■□□□□ 0.82
CTSB-227ENST00000533110 BICRAQ9NZM4 1560 aa20.09■□□□□ 0.81
CTSB-227ENST00000533110 MYO15BQ96JP2 1530 aa20.01■□□□□ 0.79
CTSB-227ENST00000533110 CECR2Q9BXF3 1484 aa19.93■□□□□ 0.78
CTSB-227ENST00000533110 SHROOM4Q9ULL8 1493 aa19.87■□□□□ 0.77
CTSB-227ENST00000533110 CC2D2AQ9P2K1 1620 aa19.87■□□□□ 0.77
CTSB-227ENST00000533110 DNAJC5Q9H3Z4 198 aa19.78■□□□□ 0.76
CTSB-227ENST00000533110 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
CTSB-227ENST00000533110 SCRIBQ14160 1630 aa19.58■□□□□ 0.73
CTSB-227ENST00000533110 DCAF1Q9Y4B6 1507 aa19.55■□□□□ 0.72
CTSB-227ENST00000533110 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
CTSB-227ENST00000533110 CUX2O14529 1486 aa19.24■□□□□ 0.67
CTSB-227ENST00000533110 ERCC6Q03468 1493 aa19.14■□□□□ 0.65
CTSB-227ENST00000533110 NCAPD3P42695 1498 aa18.89■□□□□ 0.61
CTSB-227ENST00000533110 TRIM41Q8WV44 630 aa18.77■□□□□ 0.6
CTSB-227ENST00000533110 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.59
CTSB-227ENST00000533110 NESP48681 1621 aa18.75■□□□□ 0.59
CTSB-227ENST00000533110 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
CTSB-227ENST00000533110 SMARCA2P51531 1590 aa18.71■□□□□ 0.59
CTSB-227ENST00000533110 THOC2Q8NI27 1593 aaKnown RBP18.68■□□□□ 0.58
CTSB-227ENST00000533110 SMARCA4P51532 1647 aa18.61■□□□□ 0.57
CTSB-227ENST00000533110 BAZ1BQ9UIG0 1483 aaKnown RBP18.6■□□□□ 0.57
CTSB-227ENST00000533110 LAMC3Q9Y6N6 1575 aa18.57■□□□□ 0.56
CTSB-227ENST00000533110 PDS5BQ9NTI5 1447 aa18.51■□□□□ 0.55
CTSB-227ENST00000533110 KIF21AQ7Z4S6 1674 aa18.48■□□□□ 0.55
CTSB-227ENST00000533110 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
CTSB-227ENST00000533110 PEG3Q9GZU2 1588 aa18.42■□□□□ 0.54
CTSB-227ENST00000533110 MRC2Q9UBG0 1479 aa18.38■□□□□ 0.53
CTSB-227ENST00000533110 WDR62O43379 1518 aa18.33■□□□□ 0.52
CTSB-227ENST00000533110 CADPSQ9ULU8 1353 aa18.3■□□□□ 0.52
CTSB-227ENST00000533110 OSCARQ8IYS5 282 aa18.26■□□□□ 0.51
CTSB-227ENST00000533110 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
CTSB-227ENST00000533110 CEP164Q9UPV0 1460 aa18.21■□□□□ 0.51
CTSB-227ENST00000533110 FANCD2Q9BXW9 1451 aa18.12■□□□□ 0.49
CTSB-227ENST00000533110 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
CTSB-227ENST00000533110 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
CTSB-227ENST00000533110 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
CTSB-227ENST00000533110 CFTRP13569 1480 aa17.98■□□□□ 0.47
CTSB-227ENST00000533110 WIZO95785 1651 aa17.98■□□□□ 0.47
CTSB-227ENST00000533110 URB2Q14146 1524 aaKnown RBP17.98■□□□□ 0.47
CTSB-227ENST00000533110 ARHGEF11O15085 1522 aa17.97■□□□□ 0.47
CTSB-227ENST00000533110 TRHP20396 242 aaPredicted RBP17.89■□□□□ 0.45
CTSB-227ENST00000533110 CYB5RLQ6IPT4 315 aa17.87■□□□□ 0.45
CTSB-227ENST00000533110 IFT140Q96RY7 1462 aa17.86■□□□□ 0.45
CTSB-227ENST00000533110 ZNF608Q9ULD9 1512 aaPredicted RBP17.84■□□□□ 0.45
CTSB-227ENST00000533110 AEBP2Q6ZN18 517 aaPredicted RBP17.79■□□□□ 0.44
CTSB-227ENST00000533110 TOP2AP11388 1531 aaKnown RBP17.77■□□□□ 0.44
CTSB-227ENST00000533110 ARAP1Q96P48 1450 aa17.75■□□□□ 0.43
CTSB-227ENST00000533110 EIF4G3O43432 1585 aaKnown RBP17.74■□□□□ 0.43
CTSB-227ENST00000533110 PRDM2Q13029 1718 aa17.71■□□□□ 0.43
CTSB-227ENST00000533110 TOPBP1Q92547 1522 aa17.7■□□□□ 0.42
CTSB-227ENST00000533110 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
CTSB-227ENST00000533110 FBLN2P98095 1184 aa17.67■□□□□ 0.42
CTSB-227ENST00000533110 CHD1O14646 1710 aa17.67■□□□□ 0.42
CTSB-227ENST00000533110 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
CTSB-227ENST00000533110 AQRO60306 1485 aaKnown RBP eCLIP17.62■□□□□ 0.412e-8■■■■□ 21.3
CTSB-227ENST00000533110 DNMBPQ6XZF7 1577 aa17.6■□□□□ 0.41
CTSB-227ENST00000533110 CCDC88BA6NC98 1476 aa17.55■□□□□ 0.4
CTSB-227ENST00000533110 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
CTSB-227ENST00000533110 POLA1P09884 1462 aaPredicted RBP17.49■□□□□ 0.39
CTSB-227ENST00000533110 CLASP1Q7Z460 1538 aa17.47■□□□□ 0.39
CTSB-227ENST00000533110 SNAPC4Q5SXM2 1469 aa17.46■□□□□ 0.39
CTSB-227ENST00000533110 SYNJ1O43426 1573 aa17.45■□□□□ 0.38
CTSB-227ENST00000533110 CHMP7Q8WUX9 453 aaPredicted RBP17.44■□□□□ 0.38
CTSB-227ENST00000533110 TDRD9Q8NDG6 1382 aaKnown RBP17.43■□□□□ 0.38
CTSB-227ENST00000533110 RAD54L2Q9Y4B4 1467 aa17.42■□□□□ 0.38
CTSB-227ENST00000533110 SOGA1O94964 1423 aa17.4■□□□□ 0.38
CTSB-227ENST00000533110 MAGI1Q96QZ7 1491 aaPredicted RBP17.39■□□□□ 0.37
CTSB-227ENST00000533110 WDR97A6NE52 1622 aa17.39■□□□□ 0.37
CTSB-227ENST00000533110 GAPVD1Q14C86 1478 aa17.36■□□□□ 0.37
CTSB-227ENST00000533110 SYNJ2O15056 1496 aa17.33■□□□□ 0.37
CTSB-227ENST00000533110 GRIN2BQ13224 1484 aa17.33■□□□□ 0.37
CTSB-227ENST00000533110 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
CTSB-227ENST00000533110 CUX1P39880 1505 aa17.18■□□□□ 0.34
CTSB-227ENST00000533110 PBRM1Q86U86 1689 aa17.18■□□□□ 0.34
CTSB-227ENST00000533110 ERCC6L2Q5T890 1561 aa17.14■□□□□ 0.33
CTSB-227ENST00000533110 GRIN2AQ12879 1464 aa17.1■□□□□ 0.33
CTSB-227ENST00000533110 CEP170Q5SW79 1584 aa17.09■□□□□ 0.33
CTSB-227ENST00000533110 ABCA5Q8WWZ7 1642 aa17.09■□□□□ 0.33
CTSB-227ENST00000533110 ABCA10Q8WWZ4 1543 aa17.07■□□□□ 0.32
CTSB-227ENST00000533110 NUP160Q12769 1436 aa17.04■□□□□ 0.32
CTSB-227ENST00000533110 KIF13AQ9H1H9 1805 aa17.03■□□□□ 0.32
CTSB-227ENST00000533110 ADAMTS12P58397 1594 aa17.02■□□□□ 0.31
CTSB-227ENST00000533110 ILDR1Q86SU0 546 aaPredicted RBP17■□□□□ 0.31
CTSB-227ENST00000533110 SHROOM2Q13796 1616 aa16.99■□□□□ 0.31
CTSB-227ENST00000533110 FAM69CQ0P6D2 419 aa16.99■□□□□ 0.31
CTSB-227ENST00000533110 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.31
CTSB-227ENST00000533110 ABCC10Q5T3U5 1492 aa16.96■□□□□ 0.31
CTSB-227ENST00000533110 NPM1P06748 294 aaKnown RBP eCLIP16.95■□□□□ 0.3
CTSB-227ENST00000533110 PRG4Q92954 1404 aaPredicted RBP16.95■□□□□ 0.3
CTSB-227ENST00000533110 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
CTSB-227ENST00000533110 KDM6BO15054 1643 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms