RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 ILDR1Q86SU0 546 aaPredicted RBP9.22□□□□□ -0.93
ATPAF1-210ENST00000532925 ABCC8Q09428 1581 aa9.17□□□□□ -0.94
ATPAF1-210ENST00000532925 WRNQ14191 1432 aaPredicted RBP eCLIP9.15□□□□□ -0.94
ATPAF1-210ENST00000532925 LOC105371045A0A1W2PR82 267 aa9.15□□□□□ -0.94
ATPAF1-210ENST00000532925 EMP3P54852 163 aa9.15□□□□□ -0.94
ATPAF1-210ENST00000532925 BOLA1Q9Y3E2 137 aa9.15□□□□□ -0.94
ATPAF1-210ENST00000532925 SPNS2Q8IVW8 549 aa9.14□□□□□ -0.95
ATPAF1-210ENST00000532925 PRDM2Q13029 1718 aa9.14□□□□□ -0.95
ATPAF1-210ENST00000532925 G3V3G9 751 aa9.13□□□□□ -0.95
ATPAF1-210ENST00000532925 POTEB3A0JP26 581 aa9.12□□□□□ -0.95
ATPAF1-210ENST00000532925 MMRN1Q13201 1228 aa9.12□□□□□ -0.95
ATPAF1-210ENST00000532925 POTEBQ6S5H4 581 aa9.12□□□□□ -0.95
ATPAF1-210ENST00000532925 EFCAB3Q8N7B9 438 aa9.12□□□□□ -0.95
ATPAF1-210ENST00000532925 BIVM-ERCC5R4GMW8 1640 aa9.12□□□□□ -0.95
ATPAF1-210ENST00000532925 TOP2BQ02880 1626 aa9.1□□□□□ -0.95
ATPAF1-210ENST00000532925 FAM205CA6NFA0 338 aa9.1□□□□□ -0.95
ATPAF1-210ENST00000532925 HS3ST6Q96QI5 342 aa9.1□□□□□ -0.95
ATPAF1-210ENST00000532925 SYNJ1O43426 1573 aa9.09□□□□□ -0.95
ATPAF1-210ENST00000532925 KIF21BO75037 1637 aa9.09□□□□□ -0.95
ATPAF1-210ENST00000532925 HOXB3P14651 431 aaPredicted RBP9.08□□□□□ -0.96
ATPAF1-210ENST00000532925 CFTRP13569 1480 aa9.08□□□□□ -0.96
ATPAF1-210ENST00000532925 TNIKQ9UKE5 1360 aa9.07□□□□□ -0.96
ATPAF1-210ENST00000532925 TRIM26Q12899 539 aaPredicted RBP9.06□□□□□ -0.96
ATPAF1-210ENST00000532925 RNF25Q96BH1 459 aaPredicted RBP9.06□□□□□ -0.96
ATPAF1-210ENST00000532925 KRTAP3-3Q9BYR6 98 aa9.06□□□□□ -0.96
ATPAF1-210ENST00000532925 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
ATPAF1-210ENST00000532925 GOLGA3Q08378 1498 aa9.05□□□□□ -0.96
ATPAF1-210ENST00000532925 CEP164Q9UPV0 1460 aa9.04□□□□□ -0.96
ATPAF1-210ENST00000532925 RIOK3O14730 519 aaKnown RBP9.03□□□□□ -0.96
ATPAF1-210ENST00000532925 HRCP23327 699 aa9.03□□□□□ -0.96
ATPAF1-210ENST00000532925 SOGA1O94964 1423 aa9.03□□□□□ -0.96
ATPAF1-210ENST00000532925 CC2D2AQ9P2K1 1620 aa9.02□□□□□ -0.96
ATPAF1-210ENST00000532925 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.02□□□□□ -0.97
ATPAF1-210ENST00000532925 ZNF710Q8N1W2 664 aa9.02□□□□□ -0.97
ATPAF1-210ENST00000532925 ZFP91Q96JP5 570 aaPredicted RBP9.02□□□□□ -0.97
ATPAF1-210ENST00000532925 HOXB1P14653 301 aaPredicted RBP9.01□□□□□ -0.97
ATPAF1-210ENST00000532925 MICALL2Q8IY33 904 aa9.01□□□□□ -0.97
ATPAF1-210ENST00000532925 FAM9AQ8IZU1 332 aaPredicted RBP9.01□□□□□ -0.97
ATPAF1-210ENST00000532925 DOK7Q18PE1 504 aa9□□□□□ -0.97
ATPAF1-210ENST00000532925 TMEM92Q6UXU6 159 aa9□□□□□ -0.97
ATPAF1-210ENST00000532925 MS4A4AQ96JQ5 239 aa9□□□□□ -0.97
ATPAF1-210ENST00000532925 PCGF6Q9BYE7 350 aa9□□□□□ -0.97
ATPAF1-210ENST00000532925 ERICH3Q5RHP9 1530 aa9□□□□□ -0.97
ATPAF1-210ENST00000532925 CEP162Q5TB80 1403 aa8.99□□□□□ -0.97
ATPAF1-210ENST00000532925 VGFO15240 615 aaPredicted RBP8.98□□□□□ -0.97
ATPAF1-210ENST00000532925 SOX12O15370 315 aa8.98□□□□□ -0.97
ATPAF1-210ENST00000532925 PHF8Q9UPP1 1060 aa8.98□□□□□ -0.97
ATPAF1-210ENST00000532925 CUX1P39880 1505 aa8.97□□□□□ -0.97
ATPAF1-210ENST00000532925 ERBB3P21860 1342 aa8.96□□□□□ -0.98
ATPAF1-210ENST00000532925 CADPSQ9ULU8 1353 aa8.96□□□□□ -0.98
ATPAF1-210ENST00000532925 RUSC2Q8N2Y8 1516 aa8.95□□□□□ -0.98
ATPAF1-210ENST00000532925 RIMBP2O15034 1052 aa8.93□□□□□ -0.98
ATPAF1-210ENST00000532925 PRXQ9BXM0 1461 aa8.93□□□□□ -0.98
ATPAF1-210ENST00000532925 VARS2Q5ST30 1063 aaKnown RBP8.92□□□□□ -0.98
ATPAF1-210ENST00000532925 KIF27Q86VH2 1401 aa8.91□□□□□ -0.98
ATPAF1-210ENST00000532925 BCL11BQ9C0K0 894 aaPredicted RBP8.9□□□□□ -0.98
ATPAF1-210ENST00000532925 LAMC3Q9Y6N6 1575 aa8.9□□□□□ -0.99
ATPAF1-210ENST00000532925 ZEB1P37275 1124 aaPredicted RBP8.89□□□□□ -0.99
ATPAF1-210ENST00000532925 GPR153Q6NV75 609 aa8.88□□□□□ -0.99
ATPAF1-210ENST00000532925 ZSWIM6Q9HCJ5 1215 aa8.88□□□□□ -0.99
ATPAF1-210ENST00000532925 STK24Q9Y6E0 443 aa8.88□□□□□ -0.99
ATPAF1-210ENST00000532925 RAPGEF2Q9Y4G8 1499 aa8.88□□□□□ -0.99
ATPAF1-210ENST00000532925 DNMBPQ6XZF7 1577 aa8.87□□□□□ -0.99
ATPAF1-210ENST00000532925 NLRP6P59044 892 aa8.87□□□□□ -0.99
ATPAF1-210ENST00000532925 FBXO22Q8NEZ5 403 aa8.87□□□□□ -0.99
ATPAF1-210ENST00000532925 CLIP1P30622 1438 aa8.87□□□□□ -0.99
ATPAF1-210ENST00000532925 VPS8Q8N3P4 1428 aa8.86□□□□□ -0.99
ATPAF1-210ENST00000532925 FANCD2Q9BXW9 1451 aa8.85□□□□□ -0.99
ATPAF1-210ENST00000532925 UBTFP17480 764 aaKnown RBP8.85□□□□□ -0.99
ATPAF1-210ENST00000532925 ARSIQ5FYB1 569 aa8.84□□□□□ -0.99
ATPAF1-210ENST00000532925 MFRPQ9BY79 579 aa8.84□□□□□ -0.99
ATPAF1-210ENST00000532925 ZNF687Q8N1G0 1237 aa8.83□□□□□ -1
ATPAF1-210ENST00000532925 KHSRPQ92945 711 aaKnown RBP eCLIP8.83□□□□□ -1
ATPAF1-210ENST00000532925 TAOK2Q9UL54 1235 aa8.83□□□□□ -1
ATPAF1-210ENST00000532925 FGD5Q6ZNL6 1462 aa8.83□□□□□ -1
ATPAF1-210ENST00000532925 ABCA10Q8WWZ4 1543 aa8.82□□□□□ -1
ATPAF1-210ENST00000532925 STK25O00506 426 aa8.82□□□□□ -1
ATPAF1-210ENST00000532925 ECM2O94769 699 aaPredicted RBP8.82□□□□□ -1
ATPAF1-210ENST00000532925 RNF166Q96A37 237 aaPredicted RBP8.81□□□□□ -1
ATPAF1-210ENST00000532925 CUL7Q14999 1698 aa8.8□□□□□ -1
ATPAF1-210ENST00000532925 WDR97A6NE52 1622 aa8.8□□□□□ -1
ATPAF1-210ENST00000532925 NESP48681 1621 aa8.8□□□□□ -1
ATPAF1-210ENST00000532925 TOPBP1Q92547 1522 aa8.8□□□□□ -1
ATPAF1-210ENST00000532925 CUX2O14529 1486 aa8.79□□□□□ -1
ATPAF1-210ENST00000532925 C2orf72A6NCS6 295 aa8.77□□□□□ -1.01
ATPAF1-210ENST00000532925 KIF3CO14782 793 aa8.77□□□□□ -1.01
ATPAF1-210ENST00000532925 RGL2O15211 777 aa8.77□□□□□ -1.01
ATPAF1-210ENST00000532925 MYT1LQ9UL68 1186 aa8.77□□□□□ -1.01
ATPAF1-210ENST00000532925 PDS5BQ9NTI5 1447 aa8.77□□□□□ -1.01
ATPAF1-210ENST00000532925 POLA1P09884 1462 aaPredicted RBP8.77□□□□□ -1.01
ATPAF1-210ENST00000532925 ARAP1Q96P48 1450 aa8.77□□□□□ -1.01
ATPAF1-210ENST00000532925 IGF1RP08069 1367 aa8.76□□□□□ -1.01
ATPAF1-210ENST00000532925 MAP3K1Q13233 1512 aa8.76□□□□□ -1.01
ATPAF1-210ENST00000532925 ZNF316A6NFI3 1004 aaPredicted RBP8.76□□□□□ -1.01
ATPAF1-210ENST00000532925 PKD2Q13563 968 aa8.76□□□□□ -1.01
ATPAF1-210ENST00000532925 CARMIL1Q5VZK9 1371 aa8.73□□□□□ -1.01
ATPAF1-210ENST00000532925 ABCA5Q8WWZ7 1642 aa8.73□□□□□ -1.01
ATPAF1-210ENST00000532925 NUDT7P0C024 238 aa8.73□□□□□ -1.01
ATPAF1-210ENST00000532925 ANKRD13DQ6ZTN6 518 aa8.73□□□□□ -1.01
ATPAF1-210ENST00000532925 EFCAB5A4FU69 1503 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms