RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	TIMELESS	Q9UNS1	1208 aa		24.95	■■□□□ 1.58
FGFR1-238	ENST00000532791	STK26	Q9P289	416 aa		24.94	■■□□□ 1.58
FGFR1-238	ENST00000532791	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	24.93	■■□□□ 1.58
FGFR1-238	ENST00000532791	HSPA5	P11021	654 aa	Known RBP	24.9	■■□□□ 1.58
FGFR1-238	ENST00000532791	PKD2	Q13563	968 aa		24.89	■■□□□ 1.58
FGFR1-238	ENST00000532791	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	24.89	■■□□□ 1.57
FGFR1-238	ENST00000532791	KTN1	Q86UP2	1357 aa	Known RBP	24.88	■■□□□ 1.57
FGFR1-238	ENST00000532791	CFAP44	Q96MT7	982 aa		24.88	■■□□□ 1.57
FGFR1-238	ENST00000532791	SETD5	Q9C0A6	1442 aa		24.87	■■□□□ 1.57
FGFR1-238	ENST00000532791	ARHGAP35	Q9NRY4	1499 aa		24.86	■■□□□ 1.57
FGFR1-238	ENST00000532791	CCER2	I3L3R5	266 aa		24.86	■■□□□ 1.57
FGFR1-238	ENST00000532791	IPO8	O15397	1037 aa	Known RBP	24.85	■■□□□ 1.57
FGFR1-238	ENST00000532791	ISY1	Q9ULR0	285 aa	Known RBP	24.84	■■□□□ 1.57
FGFR1-238	ENST00000532791	APBB1	O00213	710 aa		24.83	■■□□□ 1.57
FGFR1-238	ENST00000532791	SPRYD3	Q8NCJ5	442 aa		24.83	■■□□□ 1.57
FGFR1-238	ENST00000532791	RTN4	Q9NQC3	1192 aa	Known RBP	24.83	■■□□□ 1.57
FGFR1-238	ENST00000532791	PAK3	O75914	559 aa	Predicted RBP	24.83	■■□□□ 1.56
FGFR1-238	ENST00000532791	CLSTN1	O94985	981 aa		24.8	■■□□□ 1.56
FGFR1-238	ENST00000532791	FOXD1	Q16676	465 aa		24.8	■■□□□ 1.56
FGFR1-238	ENST00000532791	CALD1	Q05682	793 aa	Known RBP	24.8	■■□□□ 1.56
FGFR1-238	ENST00000532791	U2AF1L5	P0DN76	240 aa	Predicted RBP	24.79	■■□□□ 1.56
FGFR1-238	ENST00000532791	U2AF1	Q01081	240 aa	Known RBP eCLIP	24.79	■■□□□ 1.56
FGFR1-238	ENST00000532791	SOGA1	O94964	1423 aa		24.79	■■□□□ 1.56
FGFR1-238	ENST00000532791	GNL2	Q13823	731 aa	Known RBP	24.79	■■□□□ 1.56
FGFR1-238	ENST00000532791	CSB-PGBD3	P0DP91	1061 aa		24.78	■■□□□ 1.56
FGFR1-238	ENST00000532791	CARMIL2	Q6F5E8	1435 aa		24.78	■■□□□ 1.56
FGFR1-238	ENST00000532791	KIAA1211	Q6ZU35	1233 aa		24.78	■■□□□ 1.56
FGFR1-238	ENST00000532791	CHAF1A	Q13111	956 aa	Predicted RBP	24.78	■■□□□ 1.56
FGFR1-238	ENST00000532791	ROCK2	O75116	1388 aa	Known RBP	24.77	■■□□□ 1.56
FGFR1-238	ENST00000532791	DRC7	Q8IY82	874 aa		24.75	■■□□□ 1.55
FGFR1-238	ENST00000532791	ZNF330	Q9Y3S2	320 aa	Predicted RBP	24.75	■■□□□ 1.55
FGFR1-238	ENST00000532791	ITPRIP	Q8IWB1	547 aa		24.73	■■□□□ 1.55
FGFR1-238	ENST00000532791	L1TD1	Q5T7N2	865 aa	Known RBP	24.73	■■□□□ 1.55
FGFR1-238	ENST00000532791	MSN	P26038	577 aa	Known RBP	24.72	■■□□□ 1.55
FGFR1-238	ENST00000532791	NUP155	O75694	1391 aa		24.71	■■□□□ 1.55
FGFR1-238	ENST00000532791	RALBP1	Q15311	655 aa		24.71	■■□□□ 1.55
FGFR1-238	ENST00000532791	EFCAB2	Q5VUJ9	269 aa		24.71	■■□□□ 1.55
FGFR1-238	ENST00000532791	RWDD1	Q9H446	243 aa	Predicted RBP	24.7	■■□□□ 1.55
FGFR1-238	ENST00000532791	VPS8	Q8N3P4	1428 aa		24.7	■■□□□ 1.54
FGFR1-238	ENST00000532791	RCAN3	Q9UKA8	241 aa		24.69	■■□□□ 1.54
FGFR1-238	ENST00000532791	MPHOSPH9	Q99550	1183 aa		24.69	■■□□□ 1.54
FGFR1-238	ENST00000532791	CECR2	Q9BXF3	1484 aa		24.68	■■□□□ 1.54
FGFR1-238	ENST00000532791	EIF3A	Q14152	1382 aa	Known RBP	24.67	■■□□□ 1.54
FGFR1-238	ENST00000532791	ANKRD30A	Q9BXX3	1397 aa		24.66	■■□□□ 1.54
FGFR1-238	ENST00000532791	KANK4	Q5T7N3	995 aa	Predicted RBP	24.66	■■□□□ 1.54
FGFR1-238	ENST00000532791	STK31	Q9BXU1	1019 aa		24.65	■■□□□ 1.54
FGFR1-238	ENST00000532791	CHMP4A	Q9BY43	222 aa		24.65	■■□□□ 1.54
FGFR1-238	ENST00000532791	SPAG9	O60271	1321 aa	Known RBP	24.65	■■□□□ 1.54
FGFR1-238	ENST00000532791	GBP4	Q96PP9	640 aa		24.62	■■□□□ 1.53
FGFR1-238	ENST00000532791	NCBP3	Q53F19	620 aa	Known RBP	24.62	■■□□□ 1.53
FGFR1-238	ENST00000532791	GORAB	Q5T7V8	394 aa		24.6	■■□□□ 1.53
FGFR1-238	ENST00000532791	FMN1	Q68DA7	1419 aa		24.6	■■□□□ 1.53
FGFR1-238	ENST00000532791	KIF3B	O15066	747 aa		24.6	■■□□□ 1.53
FGFR1-238	ENST00000532791	TERF2IP	Q9NYB0	399 aa		24.6	■■□□□ 1.53
FGFR1-238	ENST00000532791	PTMS	P20962	102 aa		24.59	■■□□□ 1.53
FGFR1-238	ENST00000532791	TMX4	Q9H1E5	349 aa	Predicted RBP	24.59	■■□□□ 1.53
FGFR1-238	ENST00000532791	RAB3GAP2	Q9H2M9	1393 aa		24.58	■■□□□ 1.53
FGFR1-238	ENST00000532791	CHMP3	Q9Y3E7	222 aa		24.58	■■□□□ 1.53
FGFR1-238	ENST00000532791	HTATSF1	O43719	755 aa	Known RBP	24.58	■■□□□ 1.52
FGFR1-238	ENST00000532791	SMC4	Q9NTJ3	1288 aa		24.57	■■□□□ 1.52
FGFR1-238	ENST00000532791	PMFBP1	Q8TBY8	1022 aa		24.57	■■□□□ 1.52
FGFR1-238	ENST00000532791	PDS5B	Q9NTI5	1447 aa		24.56	■■□□□ 1.52
FGFR1-238	ENST00000532791	CCDC9	Q9Y3X0	531 aa	Known RBP	24.56	■■□□□ 1.52
FGFR1-238	ENST00000532791	GPATCH3	Q96I76	525 aa		24.56	■■□□□ 1.52
FGFR1-238	ENST00000532791	TAF7L	Q5H9L4	462 aa		24.55	■■□□□ 1.52
FGFR1-238	ENST00000532791	RBM19	Q9Y4C8	960 aa	Known RBP	24.55	■■□□□ 1.52
FGFR1-238	ENST00000532791	HDAC5	Q9UQL6	1122 aa		24.55	■■□□□ 1.52
FGFR1-238	ENST00000532791	TDRD9	Q8NDG6	1382 aa	Known RBP	24.54	■■□□□ 1.52
FGFR1-238	ENST00000532791	KIAA2012	Q0VF49	1180 aa		24.53	■■□□□ 1.52
FGFR1-238	ENST00000532791	EID1	Q9Y6B2	187 aa		24.53	■■□□□ 1.52
FGFR1-238	ENST00000532791	HMMR	O75330	724 aa		24.53	■■□□□ 1.52
FGFR1-238	ENST00000532791	TCERG1	O14776	1098 aa	Known RBP	24.53	■■□□□ 1.52
FGFR1-238	ENST00000532791	SLK	Q9H2G2	1235 aa	Predicted RBP	24.52	■■□□□ 1.52
FGFR1-238	ENST00000532791	NGDN	Q8NEJ9	315 aa	Known RBP	24.51	■■□□□ 1.51
FGFR1-238	ENST00000532791	TRIM6-TRIM34	B2RNG4	842 aa		24.51	■■□□□ 1.51
FGFR1-238	ENST00000532791	DEK	P35659	375 aa	Known RBP	24.51	■■□□□ 1.51
FGFR1-238	ENST00000532791	HNRNPM	P52272	730 aa	Known RBP eCLIP	24.51	■■□□□ 1.51	6e-6	■□□□□ 8.8
FGFR1-238	ENST00000532791	MFAP1	P55081	439 aa	Known RBP	24.5	■■□□□ 1.51
FGFR1-238	ENST00000532791	NUTM2D	Q5VT03	806 aa	Predicted RBP	24.5	■■□□□ 1.51
FGFR1-238	ENST00000532791	SLC4A10	Q6U841	1118 aa		24.49	■■□□□ 1.51
FGFR1-238	ENST00000532791	SYAP1	Q96A49	352 aa	Predicted RBP	24.49	■■□□□ 1.51
FGFR1-238	ENST00000532791	HSP90B1	P14625	803 aa	Known RBP	24.48	■■□□□ 1.51
FGFR1-238	ENST00000532791	CCDC88B	A6NC98	1476 aa		24.48	■■□□□ 1.51
FGFR1-238	ENST00000532791	CCDC146	Q8IYE0	955 aa		24.48	■■□□□ 1.51
FGFR1-238	ENST00000532791	GZF1	Q9H116	711 aa	Predicted RBP	24.48	■■□□□ 1.51
FGFR1-238	ENST00000532791	WASHC2C	Q9Y4E1	1318 aa		24.48	■■□□□ 1.51
FGFR1-238	ENST00000532791	LMOD3	Q0VAK6	560 aa		24.47	■■□□□ 1.51
FGFR1-238	ENST00000532791	ABCC8	Q09428	1581 aa		24.47	■■□□□ 1.51
FGFR1-238	ENST00000532791	AMPH	P49418	695 aa		24.47	■■□□□ 1.51
FGFR1-238	ENST00000532791	CLUAP1	Q96AJ1	413 aa		24.45	■■□□□ 1.51
FGFR1-238	ENST00000532791	L3MBTL2	Q969R5	705 aa		24.44	■■□□□ 1.5
FGFR1-238	ENST00000532791	CENPJ	Q9HC77	1338 aa	Predicted RBP	24.44	■■□□□ 1.5
FGFR1-238	ENST00000532791	TPM4	P67936	248 aa		24.44	■■□□□ 1.5
FGFR1-238	ENST00000532791	NLRP13	Q86W25	1043 aa		24.43	■■□□□ 1.5
FGFR1-238	ENST00000532791	CCDC34	Q96HJ3	373 aa		24.43	■■□□□ 1.5
FGFR1-238	ENST00000532791	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	24.42	■■□□□ 1.5
FGFR1-238	ENST00000532791	LTV1	Q96GA3	475 aa	Predicted RBP	24.42	■■□□□ 1.5
FGFR1-238	ENST00000532791	RSPH4A	Q5TD94	716 aa		24.42	■■□□□ 1.5
FGFR1-238	ENST00000532791		G3V3G9	751 aa		24.4	■■□□□ 1.5
FGFR1-238	ENST00000532791	DCAF8	Q5TAQ9	597 aa		24.4	■■□□□ 1.5

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms