RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 SIGLEC1Q9BZZ2 1709 aa30.77■■■□□ 2.52
SSH3-209ENST00000532600 YEATS2Q9ULM3 1422 aa30.77■■■□□ 2.52
SSH3-209ENST00000532600 BCORL1Q5H9F3 1711 aa30.76■■■□□ 2.52
SSH3-209ENST00000532600 EFCAB2Q5VUJ9 269 aa30.75■■■□□ 2.51
SSH3-209ENST00000532600 CDC42BPBQ9Y5S2 1711 aa30.74■■■□□ 2.51
SSH3-209ENST00000532600 ZFYVE16Q7Z3T8 1539 aa30.73■■■□□ 2.51
SSH3-209ENST00000532600 ARHGAP5Q13017 1502 aa30.73■■■□□ 2.51
SSH3-209ENST00000532600 MAGI2Q86UL8 1455 aa30.7■■■□□ 2.51
SSH3-209ENST00000532600 PREX2Q70Z35 1606 aa30.69■■■□□ 2.5
SSH3-209ENST00000532600 HECW2Q9P2P5 1572 aa30.69■■■□□ 2.5
SSH3-209ENST00000532600 MADDQ8WXG6 1647 aa30.68■■■□□ 2.5
SSH3-209ENST00000532600 PTPRMP28827 1452 aa30.67■■■□□ 2.5
SSH3-209ENST00000532600 ARID4BQ4LE39 1312 aaPredicted RBP30.66■■■□□ 2.5
SSH3-209ENST00000532600 CEP162Q5TB80 1403 aa30.64■■■□□ 2.5
SSH3-209ENST00000532600 CDC42BPAQ5VT25 1732 aa30.64■■■□□ 2.5
SSH3-209ENST00000532600 KDM5CP41229 1560 aa30.62■■■□□ 2.49
SSH3-209ENST00000532600 ARHGEF12Q9NZN5 1544 aa30.62■■■□□ 2.49
SSH3-209ENST00000532600 ZNF518AQ6AHZ1 1483 aa30.6■■■□□ 2.49
SSH3-209ENST00000532600 AFAP1Q8N556 730 aa30.6■■■□□ 2.49
SSH3-209ENST00000532600 ABCC1P33527 1531 aa30.59■■■□□ 2.49
SSH3-209ENST00000532600 ATP10AO60312 1499 aa30.57■■■□□ 2.48
SSH3-209ENST00000532600 RIMS1Q86UR5 1692 aaKnown RBP30.55■■■□□ 2.48
SSH3-209ENST00000532600 ITSN2Q9NZM3 1697 aa30.55■■■□□ 2.48
SSH3-209ENST00000532600 TRAPPC8Q9Y2L5 1435 aa30.55■■■□□ 2.48
SSH3-209ENST00000532600 GPATCH8Q9UKJ3 1502 aaKnown RBP30.54■■■□□ 2.48
SSH3-209ENST00000532600 LOC105371045A0A1W2PR82 267 aa30.52■■■□□ 2.48
SSH3-209ENST00000532600 C9orf84Q5VXU9 1444 aa30.52■■■□□ 2.48
SSH3-209ENST00000532600 SAMD9LQ8IVG5 1584 aa30.5■■■□□ 2.47
SSH3-209ENST00000532600 DIP2CQ9Y2E4 1556 aa30.49■■■□□ 2.47
SSH3-209ENST00000532600 MLH3Q9UHC1 1453 aa30.48■■■□□ 2.47
SSH3-209ENST00000532600 ABCA6Q8N139 1617 aa30.47■■■□□ 2.47
SSH3-209ENST00000532600 MLECQ14165 292 aa30.45■■■□□ 2.47
SSH3-209ENST00000532600 MTUS2Q5JR59 1369 aa30.44■■■□□ 2.46
SSH3-209ENST00000532600 FER1L4A9Z1Z3 1794 aa30.43■■■□□ 2.46
SSH3-209ENST00000532600 SYCP2Q9BX26 1530 aa30.42■■■□□ 2.46
SSH3-209ENST00000532600 REREQ9P2R6 1566 aa30.41■■■□□ 2.46
SSH3-209ENST00000532600 KIDINS220Q9ULH0 1771 aa30.41■■■□□ 2.46
SSH3-209ENST00000532600 EHBP1L1Q8N3D4 1523 aa30.41■■■□□ 2.46
SSH3-209ENST00000532600 ZNF777Q9ULD5 760 aaPredicted RBP30.4■■■□□ 2.46
SSH3-209ENST00000532600 TIAM1Q13009 1591 aa30.4■■■□□ 2.46
SSH3-209ENST00000532600 CCNB3Q8WWL7 1395 aa30.39■■■□□ 2.45
SSH3-209ENST00000532600 LMTK3Q96Q04 1460 aa30.37■■■□□ 2.45
SSH3-209ENST00000532600 HNRNPMP52272 730 aaKnown RBP eCLIP30.35■■■□□ 2.45
SSH3-209ENST00000532600 MYT1LQ9UL68 1186 aa30.35■■■□□ 2.45
SSH3-209ENST00000532600 CFDP1Q9UEE9 299 aaPredicted RBP30.34■■■□□ 2.45
SSH3-209ENST00000532600 KIAA1107Q9UPP5 1409 aa30.33■■■□□ 2.45
SSH3-209ENST00000532600 PLPPR3Q6T4P5 718 aa30.31■■■□□ 2.44
SSH3-209ENST00000532600 AGLP35573 1532 aa30.31■■■□□ 2.44
SSH3-209ENST00000532600 VPS8Q8N3P4 1428 aa30.3■■■□□ 2.44
SSH3-209ENST00000532600 ZNF644Q9H582 1327 aaPredicted RBP30.29■■■□□ 2.44
SSH3-209ENST00000532600 PLEKHH2Q8IVE3 1493 aa30.29■■■□□ 2.44
SSH3-209ENST00000532600 INO80Q9ULG1 1556 aaPredicted RBP30.26■■■□□ 2.43
SSH3-209ENST00000532600 NCOA2Q15596 1464 aa30.25■■■□□ 2.43
SSH3-209ENST00000532600 MBD5Q9P267 1494 aa30.24■■■□□ 2.43
SSH3-209ENST00000532600 SPAG9O60271 1321 aaKnown RBP30.23■■■□□ 2.43
SSH3-209ENST00000532600 ATP7AQ04656 1500 aa30.23■■■□□ 2.43
SSH3-209ENST00000532600 SUPT6HQ7KZ85 1726 aaKnown RBP30.23■■■□□ 2.43
SSH3-209ENST00000532600 CEBPAP49715 358 aaPredicted RBP30.22■■■□□ 2.43
SSH3-209ENST00000532600 PLXNC1O60486 1568 aa30.17■■■□□ 2.42
SSH3-209ENST00000532600 HSPA2P54652 639 aa30.17■■■□□ 2.42
SSH3-209ENST00000532600 LRRC9Q6ZRR7 1453 aa30.17■■■□□ 2.42
SSH3-209ENST00000532600 C3P01024 1663 aa30.14■■■□□ 2.42
SSH3-209ENST00000532600 CAMSAP2Q08AD1 1489 aa30.12■■■□□ 2.41
SSH3-209ENST00000532600 MAP3K1Q13233 1512 aa30.12■■■□□ 2.41
SSH3-209ENST00000532600 PREX1Q8TCU6 1659 aa30.11■■■□□ 2.41
SSH3-209ENST00000532600 KANK4Q5T7N3 995 aaPredicted RBP30.11■■■□□ 2.41
SSH3-209ENST00000532600 A2MP01023 1474 aa30.11■■■□□ 2.41
SSH3-209ENST00000532600 ILDR1Q86SU0 546 aaPredicted RBP30.08■■■□□ 2.41
SSH3-209ENST00000532600 ADGBQ8N7X0 1667 aa30.07■■■□□ 2.4
SSH3-209ENST00000532600 RTEL1-TNFRSF6BF6WH68 1400 aa30.05■■■□□ 2.4
SSH3-209ENST00000532600 CCDC141Q6ZP82 1450 aa30.03■■■□□ 2.4
SSH3-209ENST00000532600 CNTLNQ9NXG0 1405 aa30.03■■■□□ 2.4
SSH3-209ENST00000532600 MROH2AA6NES4 1674 aa30.01■■■□□ 2.39
SSH3-209ENST00000532600 SETD1BQ9UPS6 1966 aaKnown RBP29.99■■■□□ 2.39
SSH3-209ENST00000532600 ARHGEF5Q12774 1597 aa29.99■■■□□ 2.39
SSH3-209ENST00000532600 ESF1Q9H501 851 aaKnown RBP29.98■■■□□ 2.39
SSH3-209ENST00000532600 CLTCQ00610 1675 aaKnown RBP29.98■■■□□ 2.39
SSH3-209ENST00000532600 UHRF1BP1Q6BDS2 1440 aa29.96■■■□□ 2.39
SSH3-209ENST00000532600 DHX29Q7Z478 1369 aaKnown RBP29.95■■■□□ 2.39
SSH3-209ENST00000532600 ZMYM3Q14202 1370 aa29.94■■■□□ 2.38
SSH3-209ENST00000532600 MYOM3Q5VTT5 1437 aa29.93■■■□□ 2.38
SSH3-209ENST00000532600 STRCQ7RTU9 1775 aa29.92■■■□□ 2.38
SSH3-209ENST00000532600 RSPH4AQ5TD94 716 aa29.92■■■□□ 2.38
SSH3-209ENST00000532600 GGT6Q6P531 493 aa29.92■■■□□ 2.38
SSH3-209ENST00000532600 NPATQ14207 1427 aa29.88■■■□□ 2.37
SSH3-209ENST00000532600 MIA2Q96PC5 1412 aa29.88■■■□□ 2.37
SSH3-209ENST00000532600 MAST1Q9Y2H9 1570 aa29.86■■■□□ 2.37
SSH3-209ENST00000532600 PTPRKQ15262 1439 aa29.85■■■□□ 2.37
SSH3-209ENST00000532600 PPP6R1Q9UPN7 881 aa29.83■■■□□ 2.37
SSH3-209ENST00000532600 KIF3BO15066 747 aa29.81■■■□□ 2.36
SSH3-209ENST00000532600 TSPY4P0CV99 314 aa29.81■■■□□ 2.36
SSH3-209ENST00000532600 TSPY10P0CW01 314 aa29.81■■■□□ 2.36
SSH3-209ENST00000532600 MYO3AQ8NEV4 1616 aa29.78■■■□□ 2.36
SSH3-209ENST00000532600 APLP2Q06481 763 aa29.76■■■□□ 2.35
SSH3-209ENST00000532600 PTPN23Q9H3S7 1636 aa29.75■■■□□ 2.35
SSH3-209ENST00000532600 FBXO41Q8TF61 875 aa29.75■■■□□ 2.35
SSH3-209ENST00000532600 NCOA1Q15788 1441 aa29.74■■■□□ 2.35
SSH3-209ENST00000532600 ZNF142P52746 1687 aaPredicted RBP29.74■■■□□ 2.35
SSH3-209ENST00000532600 KDM5DQ9BY66 1539 aa29.74■■■□□ 2.35
SSH3-209ENST00000532600 ABCC5O15440 1437 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms