RNA–Protein interactions for RNA: ENST00000532412.1

CBX3P8-201, Transcript of chromobox 3 pseudogene 8, humanhuman

BASIC

Gene CBX3P8, Length 525 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P8-201ENST00000532412 RIMBP2O15034 1052 aa7.73□□□□□ -1.17
CBX3P8-201ENST00000532412 RGL2O15211 777 aa7.73□□□□□ -1.17
CBX3P8-201ENST00000532412 EFCAB3Q8N7B9 438 aa7.71□□□□□ -1.18
CBX3P8-201ENST00000532412 ZSWIM6Q9HCJ5 1215 aa7.71□□□□□ -1.18
CBX3P8-201ENST00000532412 STK25O00506 426 aa7.7□□□□□ -1.18
CBX3P8-201ENST00000532412 SOX12O15370 315 aa7.7□□□□□ -1.18
CBX3P8-201ENST00000532412 BCL11BQ9C0K0 894 aaPredicted RBP7.7□□□□□ -1.18
CBX3P8-201ENST00000532412 STK24Q9Y6E0 443 aa7.7□□□□□ -1.18
CBX3P8-201ENST00000532412 GPR153Q6NV75 609 aa7.67□□□□□ -1.18
CBX3P8-201ENST00000532412 NLRP6P59044 892 aa7.64□□□□□ -1.19
CBX3P8-201ENST00000532412 PHF8Q9UPP1 1060 aa7.63□□□□□ -1.19
CBX3P8-201ENST00000532412 ANKRD13DQ6ZTN6 518 aa7.62□□□□□ -1.19
CBX3P8-201ENST00000532412 MICALL2Q8IY33 904 aa7.62□□□□□ -1.19
CBX3P8-201ENST00000532412 TMEM92Q6UXU6 159 aa7.61□□□□□ -1.19
CBX3P8-201ENST00000532412 HS6ST3Q8IZP7 471 aa7.6□□□□□ -1.19
CBX3P8-201ENST00000532412 LSM11P83369 360 aaKnown RBP eCLIP7.59□□□□□ -1.19
CBX3P8-201ENST00000532412 PLA2G2EQ9NZK7 142 aa7.59□□□□□ -1.19
CBX3P8-201ENST00000532412 CHGAP10645 457 aaKnown RBP7.58□□□□□ -1.2
CBX3P8-201ENST00000532412 MS4A4AQ96JQ5 239 aa7.58□□□□□ -1.2
CBX3P8-201ENST00000532412 MFRPQ9BY79 579 aa7.58□□□□□ -1.2
CBX3P8-201ENST00000532412 FBXO22Q8NEZ5 403 aa7.57□□□□□ -1.2
CBX3P8-201ENST00000532412 DCAF8L2P0C7V8 631 aa7.56□□□□□ -1.2
CBX3P8-201ENST00000532412 AMER1Q5JTC6 1135 aaPredicted RBP7.56□□□□□ -1.2
CBX3P8-201ENST00000532412 ZNF316A6NFI3 1004 aaPredicted RBP7.55□□□□□ -1.2
CBX3P8-201ENST00000532412 ARSIQ5FYB1 569 aa7.55□□□□□ -1.2
CBX3P8-201ENST00000532412 HCSTQ9UBK5 93 aa7.53□□□□□ -1.2
CBX3P8-201ENST00000532412 RYDENQ9NUL5 291 aaKnown RBP7.52□□□□□ -1.21
CBX3P8-201ENST00000532412 PBX2P40425 430 aa7.51□□□□□ -1.21
CBX3P8-201ENST00000532412 DNAJC5Q9H3Z4 198 aa7.51□□□□□ -1.21
CBX3P8-201ENST00000532412 KHSRPQ92945 711 aaKnown RBP eCLIP7.49□□□□□ -1.21
CBX3P8-201ENST00000532412 POTEEQ6S8J3 1075 aa7.47□□□□□ -1.21
CBX3P8-201ENST00000532412 NKX1-1Q15270 411 aaPredicted RBP7.45□□□□□ -1.22
CBX3P8-201ENST00000532412 RTN4Q9NQC3 1192 aaKnown RBP7.45□□□□□ -1.22
CBX3P8-201ENST00000532412 PPP1R37O75864 691 aa7.44□□□□□ -1.22
CBX3P8-201ENST00000532412 KIF3CO14782 793 aa7.43□□□□□ -1.22
CBX3P8-201ENST00000532412 TMC2Q8TDI7 906 aa7.43□□□□□ -1.22
CBX3P8-201ENST00000532412 AXIN2Q9Y2T1 843 aa7.43□□□□□ -1.22
CBX3P8-201ENST00000532412 ADGRD1Q6QNK2 874 aa7.41□□□□□ -1.22
CBX3P8-201ENST00000532412 C2orf72A6NCS6 295 aa7.4□□□□□ -1.22
CBX3P8-201ENST00000532412 SLC34A2O95436 690 aa7.4□□□□□ -1.22
CBX3P8-201ENST00000532412 NUDT7P0C024 238 aa7.4□□□□□ -1.22
CBX3P8-201ENST00000532412 LHX6Q9UPM6 363 aa7.4□□□□□ -1.22
CBX3P8-201ENST00000532412 ARHGAP33O14559 1287 aa7.37□□□□□ -1.23
CBX3P8-201ENST00000532412 GTPBP6O43824 516 aaPredicted RBP7.37□□□□□ -1.23
CBX3P8-201ENST00000532412 RGS20O76081 388 aa7.37□□□□□ -1.23
CBX3P8-201ENST00000532412 BBXQ8WY36 941 aaPredicted RBP7.36□□□□□ -1.23
CBX3P8-201ENST00000532412 PSDA5PKW4 1024 aaPredicted RBP7.35□□□□□ -1.23
CBX3P8-201ENST00000532412 TK2O00142 265 aa7.35□□□□□ -1.23
CBX3P8-201ENST00000532412 HRO43593 1189 aa7.35□□□□□ -1.23
CBX3P8-201ENST00000532412 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.34□□□□□ -1.23
CBX3P8-201ENST00000532412 PCDHGA4Q9Y5G9 962 aa7.34□□□□□ -1.23
CBX3P8-201ENST00000532412 IRX2Q9BZI1 471 aaPredicted RBP7.33□□□□□ -1.24
CBX3P8-201ENST00000532412 GPHNQ9NQX3 736 aaPredicted RBP7.33□□□□□ -1.24
CBX3P8-201ENST00000532412 FOXK1P85037 733 aa7.32□□□□□ -1.24
CBX3P8-201ENST00000532412 IFFO2Q5TF58 517 aa7.32□□□□□ -1.24
CBX3P8-201ENST00000532412 PDE4AP27815 886 aa7.29□□□□□ -1.24
CBX3P8-201ENST00000532412 PLPP6Q8IY26 295 aa7.29□□□□□ -1.24
CBX3P8-201ENST00000532412 PTCD2Q8WV60 388 aaKnown RBP7.29□□□□□ -1.24
CBX3P8-201ENST00000532412 KCTD12Q96CX2 325 aaKnown RBP7.29□□□□□ -1.24
CBX3P8-201ENST00000532412 TBC1D12O60347 775 aa7.28□□□□□ -1.24
CBX3P8-201ENST00000532412 DSG2Q14126 1118 aa7.28□□□□□ -1.24
CBX3P8-201ENST00000532412 DMRTA1Q5VZB9 504 aa7.28□□□□□ -1.24
CBX3P8-201ENST00000532412 SPRYD3Q8NCJ5 442 aa7.28□□□□□ -1.24
CBX3P8-201ENST00000532412 CRISPLD2Q9H0B8 497 aa7.28□□□□□ -1.24
CBX3P8-201ENST00000532412 KDM4FA0A1W2PPD8 638 aa7.27□□□□□ -1.25
CBX3P8-201ENST00000532412 PSEN2P49810 448 aa7.26□□□□□ -1.25
CBX3P8-201ENST00000532412 PPP1R15BQ5SWA1 713 aa7.25□□□□□ -1.25
CBX3P8-201ENST00000532412 NCKAP5LQ9HCH0 1330 aa7.25□□□□□ -1.25
CBX3P8-201ENST00000532412 DDX27Q96GQ7 796 aaKnown RBP7.24□□□□□ -1.25
CBX3P8-201ENST00000532412 KCNH8Q96L42 1107 aa7.24□□□□□ -1.25
CBX3P8-201ENST00000532412 LARP6Q9BRS8 491 aaKnown RBP7.24□□□□□ -1.25
CBX3P8-201ENST00000532412 A0A0G2JS52 829 aa7.23□□□□□ -1.25
CBX3P8-201ENST00000532412 PPP4R3BQ5MIZ7 849 aa7.23□□□□□ -1.25
CBX3P8-201ENST00000532412 PAXIP1Q6ZW49 1069 aaPredicted RBP7.22□□□□□ -1.25
CBX3P8-201ENST00000532412 STAC3Q96MF2 364 aa7.22□□□□□ -1.25
CBX3P8-201ENST00000532412 CFAP44Q96MT7 982 aa7.22□□□□□ -1.25
CBX3P8-201ENST00000532412 PTPN5P54829 565 aa7.21□□□□□ -1.26
CBX3P8-201ENST00000532412 MFSD10Q14728 455 aa7.21□□□□□ -1.26
CBX3P8-201ENST00000532412 CADPS2Q86UW7 1296 aa7.19□□□□□ -1.26
CBX3P8-201ENST00000532412 OXER1Q8TDS5 423 aa7.19□□□□□ -1.26
CBX3P8-201ENST00000532412 UPF1Q92900 1129 aaKnown RBP eCLIP7.18□□□□□ -1.26
CBX3P8-201ENST00000532412 VPS9D1Q9Y2B5 631 aa7.17□□□□□ -1.26
CBX3P8-201ENST00000532412 THSD4Q6ZMP0 1018 aa7.16□□□□□ -1.26
CBX3P8-201ENST00000532412 MAP3K9P80192 1104 aa7.14□□□□□ -1.27
CBX3P8-201ENST00000532412 KCNK17Q96T54 332 aa7.14□□□□□ -1.27
CBX3P8-201ENST00000532412 SLC4A5Q9BY07 1137 aa7.14□□□□□ -1.27
CBX3P8-201ENST00000532412 BHMG1C9JSJ3 638 aaPredicted RBP7.13□□□□□ -1.27
CBX3P8-201ENST00000532412 Q6ZNB5 142 aa7.13□□□□□ -1.27
CBX3P8-201ENST00000532412 JPH4Q96JJ6 628 aa7.12□□□□□ -1.27
CBX3P8-201ENST00000532412 BCL2L12Q9HB09 334 aa7.12□□□□□ -1.27
CBX3P8-201ENST00000532412 ZNF454Q8N9F8 522 aa7.11□□□□□ -1.27
CBX3P8-201ENST00000532412 WDR70Q9NW82 654 aa7.11□□□□□ -1.27
CBX3P8-201ENST00000532412 EVI5O60447 810 aa7.1□□□□□ -1.27
CBX3P8-201ENST00000532412 CAMK2BQ13554 666 aa7.1□□□□□ -1.27
CBX3P8-201ENST00000532412 EMILIN3Q9NT22 766 aa7.1□□□□□ -1.27
CBX3P8-201ENST00000532412 PTPREP23469 700 aa7.09□□□□□ -1.27
CBX3P8-201ENST00000532412 FOSBP53539 338 aa7.09□□□□□ -1.27
CBX3P8-201ENST00000532412 WNT2BQ93097 391 aa7.08□□□□□ -1.28
CBX3P8-201ENST00000532412 ANO8Q9HCE9 1232 aaPredicted RBP7.08□□□□□ -1.28
CBX3P8-201ENST00000532412 ITGBL1O95965 494 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms