RNA–Protein interactions for RNA: ENST00000532069.5

CLNS1A-211, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 898 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-211ENST00000532069 SETD1BQ9UPS6 1966 aaKnown RBP22.4■■□□□ 1.18
CLNS1A-211ENST00000532069 P3H3Q8IVL6 736 aa22.4■■□□□ 1.18
CLNS1A-211ENST00000532069 ARHGEF12Q9NZN5 1544 aa22.4■■□□□ 1.18
CLNS1A-211ENST00000532069 PTPRTO14522 1441 aa22.39■■□□□ 1.17
CLNS1A-211ENST00000532069 PLEKHD1A6NEE1 506 aa22.38■■□□□ 1.17
CLNS1A-211ENST00000532069 PRXQ9BXM0 1461 aa22.37■■□□□ 1.17
CLNS1A-211ENST00000532069 SAMD9Q5K651 1589 aa22.37■■□□□ 1.17
CLNS1A-211ENST00000532069 HECW1Q76N89 1606 aa22.36■■□□□ 1.17
CLNS1A-211ENST00000532069 C9orf84Q5VXU9 1444 aa22.34■■□□□ 1.17
CLNS1A-211ENST00000532069 ATP10AO60312 1499 aa22.33■■□□□ 1.16
CLNS1A-211ENST00000532069 NUP153P49790 1475 aaKnown RBP22.33■■□□□ 1.16
CLNS1A-211ENST00000532069 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.31■■□□□ 1.168e-8■■□□□ 13.9
CLNS1A-211ENST00000532069 LTBP4Q8N2S1 1624 aa22.27■■□□□ 1.16
CLNS1A-211ENST00000532069 SCAPERQ9BY12 1400 aa22.26■■□□□ 1.15
CLNS1A-211ENST00000532069 CEBPAP49715 358 aaPredicted RBP22.26■■□□□ 1.15
CLNS1A-211ENST00000532069 ESF1Q9H501 851 aaKnown RBP22.2■■□□□ 1.14
CLNS1A-211ENST00000532069 PLCH2O75038 1416 aa22.19■■□□□ 1.14
CLNS1A-211ENST00000532069 C3P01024 1663 aa22.18■■□□□ 1.14
CLNS1A-211ENST00000532069 ZNF518AQ6AHZ1 1483 aa22.16■■□□□ 1.14
CLNS1A-211ENST00000532069 MYO5CQ9NQX4 1742 aa22.15■■□□□ 1.14
CLNS1A-211ENST00000532069 EFCAB2Q5VUJ9 269 aa22.15■■□□□ 1.14
CLNS1A-211ENST00000532069 NCOA1Q15788 1441 aa22.14■■□□□ 1.14
CLNS1A-211ENST00000532069 REREQ9P2R6 1566 aa22.14■■□□□ 1.13
CLNS1A-211ENST00000532069 UBAP1LF5GYI3 381 aa22.14■■□□□ 1.13
CLNS1A-211ENST00000532069 TRAPPC8Q9Y2L5 1435 aa22.14■■□□□ 1.13
CLNS1A-211ENST00000532069 MYT1LQ9UL68 1186 aa22.11■■□□□ 1.13
CLNS1A-211ENST00000532069 KDM5CP41229 1560 aa22.08■■□□□ 1.13
CLNS1A-211ENST00000532069 CNTLNQ9NXG0 1405 aa22.08■■□□□ 1.13
CLNS1A-211ENST00000532069 AGLP35573 1532 aa22.08■■□□□ 1.13
CLNS1A-211ENST00000532069 DIP2CQ9Y2E4 1556 aa22.06■■□□□ 1.12
CLNS1A-211ENST00000532069 CAMSAP1Q5T5Y3 1602 aa22.06■■□□□ 1.12
CLNS1A-211ENST00000532069 MED1Q15648 1581 aaPredicted RBP22.04■■□□□ 1.12
CLNS1A-211ENST00000532069 CDK13Q14004 1512 aaKnown RBP22.01■■□□□ 1.11
CLNS1A-211ENST00000532069 NPATQ14207 1427 aa22.01■■□□□ 1.11
CLNS1A-211ENST00000532069 RANGAP1P46060 587 aaPredicted RBP22.01■■□□□ 1.11
CLNS1A-211ENST00000532069 CDK11AQ9UQ88 783 aaPredicted RBP22.01■■□□□ 1.11
CLNS1A-211ENST00000532069 ARHGAP5Q13017 1502 aa22.01■■□□□ 1.11
CLNS1A-211ENST00000532069 MROH2AA6NES4 1674 aa22■■□□□ 1.11
CLNS1A-211ENST00000532069 KIF14Q15058 1648 aa21.99■■□□□ 1.11
CLNS1A-211ENST00000532069 MLH3Q9UHC1 1453 aa21.99■■□□□ 1.11
CLNS1A-211ENST00000532069 CSRNP3Q8WYN3 585 aa21.99■■□□□ 1.11
CLNS1A-211ENST00000532069 ABCA6Q8N139 1617 aa21.98■■□□□ 1.11
CLNS1A-211ENST00000532069 SUPT6HQ7KZ85 1726 aaKnown RBP21.98■■□□□ 1.11
CLNS1A-211ENST00000532069 PKD2Q13563 968 aa21.98■■□□□ 1.11
CLNS1A-211ENST00000532069 ZNF335Q9H4Z2 1342 aaPredicted RBP21.98■■□□□ 1.11
CLNS1A-211ENST00000532069 AFAP1Q8N556 730 aa21.97■■□□□ 1.11
CLNS1A-211ENST00000532069 PLA2R1Q13018 1463 aa21.96■■□□□ 1.11
CLNS1A-211ENST00000532069 PHF23Q9BUL5 403 aaPredicted RBP21.95■■□□□ 1.1
CLNS1A-211ENST00000532069 ZNF142P52746 1687 aaPredicted RBP21.93■■□□□ 1.1
CLNS1A-211ENST00000532069 SCAF1Q9H7N4 1312 aaKnown RBP21.93■■□□□ 1.1
CLNS1A-211ENST00000532069 CLIP1P30622 1438 aa21.91■■□□□ 1.1
CLNS1A-211ENST00000532069 NCKAP5LQ9HCH0 1330 aa21.91■■□□□ 1.1
CLNS1A-211ENST00000532069 TOM1O60784 492 aa21.91■■□□□ 1.1
CLNS1A-211ENST00000532069 HSPA1LP34931 641 aa21.88■■□□□ 1.09
CLNS1A-211ENST00000532069 PPP6R1Q9UPN7 881 aa21.87■■□□□ 1.09
CLNS1A-211ENST00000532069 EEA1Q15075 1411 aa21.87■■□□□ 1.09
CLNS1A-211ENST00000532069 MYO3AQ8NEV4 1616 aa21.87■■□□□ 1.09
CLNS1A-211ENST00000532069 TCOF1Q13428 1488 aaKnown RBP21.86■■□□□ 1.09
CLNS1A-211ENST00000532069 ATP1B4Q9UN42 357 aaPredicted RBP21.86■■□□□ 1.09
CLNS1A-211ENST00000532069 TROQ12816 1431 aaPredicted RBP21.86■■□□□ 1.09
CLNS1A-211ENST00000532069 FMN1Q68DA7 1419 aa21.86■■□□□ 1.09
CLNS1A-211ENST00000532069 ZMYM3Q14202 1370 aa21.86■■□□□ 1.09
CLNS1A-211ENST00000532069 CEP170BQ9Y4F5 1589 aaPredicted RBP21.85■■□□□ 1.09
CLNS1A-211ENST00000532069 CPS1P31327 1500 aa21.85■■□□□ 1.09
CLNS1A-211ENST00000532069 CDC42BPBQ9Y5S2 1711 aa21.84■■□□□ 1.09
CLNS1A-211ENST00000532069 PIP4K2BP78356 416 aa21.84■■□□□ 1.09
CLNS1A-211ENST00000532069 ITSN2Q9NZM3 1697 aa21.84■■□□□ 1.09
CLNS1A-211ENST00000532069 ABCC1P33527 1531 aa21.83■■□□□ 1.09
CLNS1A-211ENST00000532069 KIDINS220Q9ULH0 1771 aa21.83■■□□□ 1.09
CLNS1A-211ENST00000532069 PREX2Q70Z35 1606 aa21.81■■□□□ 1.08
CLNS1A-211ENST00000532069 PTPRKQ15262 1439 aa21.79■■□□□ 1.08
CLNS1A-211ENST00000532069 CLTCQ00610 1675 aaKnown RBP21.78■■□□□ 1.08
CLNS1A-211ENST00000532069 POLR1AO95602 1720 aaPredicted RBP21.75■■□□□ 1.07
CLNS1A-211ENST00000532069 SHANK2Q9UPX8 1470 aa21.71■■□□□ 1.07
CLNS1A-211ENST00000532069 A2ML1A8K2U0 1454 aa21.71■■□□□ 1.07
CLNS1A-211ENST00000532069 SAMD9LQ8IVG5 1584 aa21.7■■□□□ 1.06
CLNS1A-211ENST00000532069 DNMT1P26358 1616 aaKnown RBP21.68■■□□□ 1.06
CLNS1A-211ENST00000532069 SPAG9O60271 1321 aaKnown RBP21.66■■□□□ 1.06
CLNS1A-211ENST00000532069 CDC42BPAQ5VT25 1732 aa21.65■■□□□ 1.06
CLNS1A-211ENST00000532069 PLXNC1O60486 1568 aa21.65■■□□□ 1.06
CLNS1A-211ENST00000532069 ATP7AQ04656 1500 aa21.63■■□□□ 1.05
CLNS1A-211ENST00000532069 CCDC18Q5T9S5 1454 aa21.63■■□□□ 1.05
CLNS1A-211ENST00000532069 LRRIQ1Q96JM4 1722 aa21.62■■□□□ 1.05
CLNS1A-211ENST00000532069 A2MP01023 1474 aa21.62■■□□□ 1.05
CLNS1A-211ENST00000532069 GGT6Q6P531 493 aa21.61■■□□□ 1.05
CLNS1A-211ENST00000532069 NEURL4Q96JN8 1562 aa21.61■■□□□ 1.05
CLNS1A-211ENST00000532069 ARHGAP35Q9NRY4 1499 aa21.59■■□□□ 1.05
CLNS1A-211ENST00000532069 ANKLE2Q86XL3 938 aa21.59■■□□□ 1.05
CLNS1A-211ENST00000532069 SYCP2Q9BX26 1530 aa21.59■■□□□ 1.05
CLNS1A-211ENST00000532069 ADGBQ8N7X0 1667 aa21.58■■□□□ 1.05
CLNS1A-211ENST00000532069 PLEKHH2Q8IVE3 1493 aa21.58■■□□□ 1.04
CLNS1A-211ENST00000532069 INO80Q9ULG1 1556 aaPredicted RBP21.57■■□□□ 1.04
CLNS1A-211ENST00000532069 ZNF777Q9ULD5 760 aaPredicted RBP21.57■■□□□ 1.04
CLNS1A-211ENST00000532069 RNF17Q9BXT8 1623 aaKnown RBP21.57■■□□□ 1.04
CLNS1A-211ENST00000532069 VWDEQ8N2E2 1590 aa21.57■■□□□ 1.04
CLNS1A-211ENST00000532069 SYNMO15061 1565 aa21.55■■□□□ 1.04
CLNS1A-211ENST00000532069 UBTFP17480 764 aaKnown RBP21.54■■□□□ 1.04
CLNS1A-211ENST00000532069 DEPDC5O75140 1603 aa21.54■■□□□ 1.04
CLNS1A-211ENST00000532069 ALKQ9UM73 1620 aa21.54■■□□□ 1.04
CLNS1A-211ENST00000532069 TNRQ92752 1358 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms