RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 UBTFP17480 764 aaKnown RBP28.82■■■□□ 2.2
PKP3-208ENST00000531857 FER1L4A9Z1Z3 1794 aa28.82■■■□□ 2.2
PKP3-208ENST00000531857 PLPPR3Q6T4P5 718 aa28.81■■■□□ 2.2
PKP3-208ENST00000531857 ATP1B4Q9UN42 357 aaPredicted RBP28.81■■■□□ 2.2
PKP3-208ENST00000531857 ARHGAP35Q9NRY4 1499 aa28.8■■■□□ 2.2
PKP3-208ENST00000531857 KIF14Q15058 1648 aa28.8■■■□□ 2.2
PKP3-208ENST00000531857 FMN1Q68DA7 1419 aa28.78■■■□□ 2.2
PKP3-208ENST00000531857 LRRIQ1Q96JM4 1722 aa28.78■■■□□ 2.2
PKP3-208ENST00000531857 HSPA2P54652 639 aa28.76■■■□□ 2.19
PKP3-208ENST00000531857 MLECQ14165 292 aa28.76■■■□□ 2.19
PKP3-208ENST00000531857 EFCAB2Q5VUJ9 269 aa28.71■■■□□ 2.19
PKP3-208ENST00000531857 ATP10AO60312 1499 aa28.7■■■□□ 2.18
PKP3-208ENST00000531857 CDK11AQ9UQ88 783 aaPredicted RBP28.68■■■□□ 2.18
PKP3-208ENST00000531857 ARHGEF12Q9NZN5 1544 aa28.68■■■□□ 2.18
PKP3-208ENST00000531857 TROQ12816 1431 aaPredicted RBP28.67■■■□□ 2.18
PKP3-208ENST00000531857 C9orf84Q5VXU9 1444 aa28.67■■■□□ 2.18
PKP3-208ENST00000531857 ARHGAP5Q13017 1502 aa28.65■■■□□ 2.18
PKP3-208ENST00000531857 CDC42BPBQ9Y5S2 1711 aa28.65■■■□□ 2.18
PKP3-208ENST00000531857 CHIC1Q5VXU3 224 aa28.64■■■□□ 2.18
PKP3-208ENST00000531857 KDM5CP41229 1560 aa28.62■■■□□ 2.17
PKP3-208ENST00000531857 ZNF518AQ6AHZ1 1483 aa28.62■■■□□ 2.17
PKP3-208ENST00000531857 PREX1Q8TCU6 1659 aa28.61■■■□□ 2.17
PKP3-208ENST00000531857 AFAP1Q8N556 730 aa28.6■■■□□ 2.17
PKP3-208ENST00000531857 CLIP1P30622 1438 aa28.6■■■□□ 2.17
PKP3-208ENST00000531857 CEBPAP49715 358 aaPredicted RBP28.56■■■□□ 2.16
PKP3-208ENST00000531857 DIP2CQ9Y2E4 1556 aa28.56■■■□□ 2.16
PKP3-208ENST00000531857 PREX2Q70Z35 1606 aa28.54■■■□□ 2.16
PKP3-208ENST00000531857 ABCA6Q8N139 1617 aa28.54■■■□□ 2.16
PKP3-208ENST00000531857 MYT1LQ9UL68 1186 aa28.51■■■□□ 2.15
PKP3-208ENST00000531857 ITSN2Q9NZM3 1697 aa28.5■■■□□ 2.15
PKP3-208ENST00000531857 REREQ9P2R6 1566 aa28.5■■■□□ 2.15
PKP3-208ENST00000531857 STRCQ7RTU9 1775 aa28.49■■■□□ 2.15
PKP3-208ENST00000531857 CDC42BPAQ5VT25 1732 aa28.49■■■□□ 2.15
PKP3-208ENST00000531857 ABCC1P33527 1531 aa28.48■■■□□ 2.15
PKP3-208ENST00000531857 CASKIN1Q8WXD9 1431 aa28.48■■■□□ 2.15
PKP3-208ENST00000531857 SETD1BQ9UPS6 1966 aaKnown RBP28.47■■■□□ 2.15
PKP3-208ENST00000531857 MLH3Q9UHC1 1453 aa28.46■■■□□ 2.15
PKP3-208ENST00000531857 TRAPPC8Q9Y2L5 1435 aa28.46■■■□□ 2.15
PKP3-208ENST00000531857 CERKQ8TCT0 537 aa28.46■■■□□ 2.15
PKP3-208ENST00000531857 CCDC18Q5T9S5 1454 aa28.46■■■□□ 2.15
PKP3-208ENST00000531857 C3P01024 1663 aa28.45■■■□□ 2.15
PKP3-208ENST00000531857 KIDINS220Q9ULH0 1771 aa28.43■■■□□ 2.14
PKP3-208ENST00000531857 AGLP35573 1532 aa28.39■■■□□ 2.14
PKP3-208ENST00000531857 UHRF1BP1Q6BDS2 1440 aa28.38■■■□□ 2.13
PKP3-208ENST00000531857 FYCO1Q9BQS8 1478 aa28.35■■■□□ 2.13
PKP3-208ENST00000531857 SAMD9LQ8IVG5 1584 aa28.33■■■□□ 2.13
PKP3-208ENST00000531857 DMRT2Q9Y5R5 561 aa28.29■■■□□ 2.12
PKP3-208ENST00000531857 SYCP2Q9BX26 1530 aa28.28■■■□□ 2.12
PKP3-208ENST00000531857 ESF1Q9H501 851 aaKnown RBP28.28■■■□□ 2.12
PKP3-208ENST00000531857 ZNF777Q9ULD5 760 aaPredicted RBP28.28■■■□□ 2.12
PKP3-208ENST00000531857 GPATCH8Q9UKJ3 1502 aaKnown RBP28.27■■■□□ 2.12
PKP3-208ENST00000531857 SUPT6HQ7KZ85 1726 aaKnown RBP28.26■■■□□ 2.12
PKP3-208ENST00000531857 MROH2AA6NES4 1674 aa28.23■■■□□ 2.11
PKP3-208ENST00000531857 HNRNPMP52272 730 aaKnown RBP eCLIP28.22■■■□□ 2.11
PKP3-208ENST00000531857 CNTLNQ9NXG0 1405 aa28.22■■■□□ 2.11
PKP3-208ENST00000531857 PTPRTO14522 1441 aa28.2■■■□□ 2.11
PKP3-208ENST00000531857 SPAG9O60271 1321 aaKnown RBP28.18■■■□□ 2.1
PKP3-208ENST00000531857 ATP7AQ04656 1500 aa28.18■■■□□ 2.1
PKP3-208ENST00000531857 INO80Q9ULG1 1556 aaPredicted RBP28.17■■■□□ 2.1
PKP3-208ENST00000531857 CLTCQ00610 1675 aaKnown RBP28.16■■■□□ 2.1
PKP3-208ENST00000531857 NCOA1Q15788 1441 aa28.14■■■□□ 2.1
PKP3-208ENST00000531857 KIAA1107Q9UPP5 1409 aa28.14■■■□□ 2.1
PKP3-208ENST00000531857 PLXNC1O60486 1568 aa28.14■■■□□ 2.1
PKP3-208ENST00000531857 CFDP1Q9UEE9 299 aaPredicted RBP28.13■■■□□ 2.09
PKP3-208ENST00000531857 LTBP4Q8N2S1 1624 aa28.13■■■□□ 2.09
PKP3-208ENST00000531857 ZMYM3Q14202 1370 aa28.12■■■□□ 2.09
PKP3-208ENST00000531857 CCNB3Q8WWL7 1395 aa28.11■■■□□ 2.09
PKP3-208ENST00000531857 CAMSAP1Q5T5Y3 1602 aa28.11■■■□□ 2.09
PKP3-208ENST00000531857 NPATQ14207 1427 aa28.11■■■□□ 2.09
PKP3-208ENST00000531857 PLEKHH2Q8IVE3 1493 aa28.11■■■□□ 2.09
PKP3-208ENST00000531857 A2MP01023 1474 aa28.09■■■□□ 2.09
PKP3-208ENST00000531857 ADGBQ8N7X0 1667 aa28.07■■■□□ 2.08
PKP3-208ENST00000531857 MTUS2Q5JR59 1369 aa28.07■■■□□ 2.08
PKP3-208ENST00000531857 MYO3AQ8NEV4 1616 aa28.07■■■□□ 2.08
PKP3-208ENST00000531857 TIAM1Q13009 1591 aa28.06■■■□□ 2.08
PKP3-208ENST00000531857 ZNF142P52746 1687 aaPredicted RBP28.05■■■□□ 2.08
PKP3-208ENST00000531857 ZNF644Q9H582 1327 aaPredicted RBP28.04■■■□□ 2.08
PKP3-208ENST00000531857 GGT6Q6P531 493 aa28.02■■■□□ 2.08
PKP3-208ENST00000531857 PTPRKQ15262 1439 aa28.01■■■□□ 2.07
PKP3-208ENST00000531857 NCKAP5LQ9HCH0 1330 aa28■■■□□ 2.07
PKP3-208ENST00000531857 EHBP1L1Q8N3D4 1523 aa27.99■■■□□ 2.07
PKP3-208ENST00000531857 MBD5Q9P267 1494 aa27.99■■■□□ 2.07
PKP3-208ENST00000531857 CEP170BQ9Y4F5 1589 aaPredicted RBP27.99■■■□□ 2.07
PKP3-208ENST00000531857 DISP3Q9P2K9 1392 aa27.99■■■□□ 2.07
PKP3-208ENST00000531857 IQSEC2Q5JU85 1478 aa27.97■■■□□ 2.07
PKP3-208ENST00000531857 ILDR2Q71H61 639 aa27.94■■■□□ 2.06
PKP3-208ENST00000531857 PLA2R1Q13018 1463 aa27.93■■■□□ 2.06
PKP3-208ENST00000531857 CEP162Q5TB80 1403 aa27.92■■■□□ 2.06
PKP3-208ENST00000531857 ZNF335Q9H4Z2 1342 aaPredicted RBP27.92■■■□□ 2.06
PKP3-208ENST00000531857 TCOF1Q13428 1488 aaKnown RBP27.9■■■□□ 2.06
PKP3-208ENST00000531857 RTEL1-TNFRSF6BF6WH68 1400 aa27.9■■■□□ 2.06
PKP3-208ENST00000531857 PPP6R1Q9UPN7 881 aa27.89■■■□□ 2.06
PKP3-208ENST00000531857 PKD2Q13563 968 aa27.88■■■□□ 2.05
PKP3-208ENST00000531857 SPATA31D1Q6ZQQ2 1576 aa27.88■■■□□ 2.05
PKP3-208ENST00000531857 DNMT1P26358 1616 aaKnown RBP27.87■■■□□ 2.05
PKP3-208ENST00000531857 DHX29Q7Z478 1369 aaKnown RBP27.86■■■□□ 2.05
PKP3-208ENST00000531857 A2ML1A8K2U0 1454 aa27.83■■■□□ 2.05
PKP3-208ENST00000531857 CAMSAP2Q08AD1 1489 aa27.83■■■□□ 2.05
PKP3-208ENST00000531857 NCOA2Q15596 1464 aa27.83■■■□□ 2.04
PKP3-208ENST00000531857 CCDC141Q6ZP82 1450 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms