RNA–Protein interactions for RNA: ENST00000531018.5

SYVN1-213, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-213ENST00000531018 TIAM1Q13009 1591 aa14.68□□□□□ -0.06
SYVN1-213ENST00000531018 EHBP1L1Q8N3D4 1523 aa14.66□□□□□ -0.06
SYVN1-213ENST00000531018 DENND4BO75064 1496 aaPredicted RBP14.65□□□□□ -0.06
SYVN1-213ENST00000531018 RAPGEF3O95398 923 aa14.65□□□□□ -0.06
SYVN1-213ENST00000531018 EFCAB2Q5VUJ9 269 aa14.65□□□□□ -0.06
SYVN1-213ENST00000531018 GPATCH8Q9UKJ3 1502 aaKnown RBP14.65□□□□□ -0.06
SYVN1-213ENST00000531018 MTUS2Q5JR59 1369 aa14.64□□□□□ -0.07
SYVN1-213ENST00000531018 ARHGAP5Q13017 1502 aa14.63□□□□□ -0.07
SYVN1-213ENST00000531018 ZMYM4Q5VZL5 1548 aa14.63□□□□□ -0.07
SYVN1-213ENST00000531018 LRRC9Q6ZRR7 1453 aa14.62□□□□□ -0.07
SYVN1-213ENST00000531018 POGZQ7Z3K3 1410 aa14.61□□□□□ -0.07
SYVN1-213ENST00000531018 SCAPERQ9BY12 1400 aa14.61□□□□□ -0.07
SYVN1-213ENST00000531018 SUPT6HQ7KZ85 1726 aaKnown RBP14.6□□□□□ -0.07
SYVN1-213ENST00000531018 ABCC1P33527 1531 aa14.6□□□□□ -0.07
SYVN1-213ENST00000531018 ARHGEF12Q9NZN5 1544 aa14.59□□□□□ -0.07
SYVN1-213ENST00000531018 KDM5CP41229 1560 aa14.59□□□□□ -0.07
SYVN1-213ENST00000531018 MAGI2Q86UL8 1455 aa14.58□□□□□ -0.08
SYVN1-213ENST00000531018 SAMD9LQ8IVG5 1584 aa14.58□□□□□ -0.08
SYVN1-213ENST00000531018 HECW2Q9P2P5 1572 aa14.58□□□□□ -0.08
SYVN1-213ENST00000531018 NCOA2Q15596 1464 aa14.57□□□□□ -0.08
SYVN1-213ENST00000531018 KANK4Q5T7N3 995 aaPredicted RBP14.57□□□□□ -0.08
SYVN1-213ENST00000531018 ITSN2Q9NZM3 1697 aa14.57□□□□□ -0.08
SYVN1-213ENST00000531018 CCNB3Q8WWL7 1395 aa14.57□□□□□ -0.08
SYVN1-213ENST00000531018 ARHGEF40Q8TER5 1519 aa14.56□□□□□ -0.08
SYVN1-213ENST00000531018 KIAA1107Q9UPP5 1409 aa14.56□□□□□ -0.08
SYVN1-213ENST00000531018 ZNF518AQ6AHZ1 1483 aa14.56□□□□□ -0.08
SYVN1-213ENST00000531018 MLH3Q9UHC1 1453 aa14.53□□□□□ -0.08
SYVN1-213ENST00000531018 TRAPPC8Q9Y2L5 1435 aa14.53□□□□□ -0.08
SYVN1-213ENST00000531018 ILDR1Q86SU0 546 aaPredicted RBP14.53□□□□□ -0.08
SYVN1-213ENST00000531018 AFAP1Q8N556 730 aa14.53□□□□□ -0.08
SYVN1-213ENST00000531018 CFDP1Q9UEE9 299 aaPredicted RBP14.53□□□□□ -0.08
SYVN1-213ENST00000531018 ZFYVE16Q7Z3T8 1539 aa14.52□□□□□ -0.08
SYVN1-213ENST00000531018 PLEKHH2Q8IVE3 1493 aa14.52□□□□□ -0.08
SYVN1-213ENST00000531018 YEATS2Q9ULM3 1422 aa14.52□□□□□ -0.08
SYVN1-213ENST00000531018 SIGLEC1Q9BZZ2 1709 aa14.51□□□□□ -0.09
SYVN1-213ENST00000531018 SYCP2Q9BX26 1530 aa14.51□□□□□ -0.09
SYVN1-213ENST00000531018 MBD5Q9P267 1494 aa14.5□□□□□ -0.09
SYVN1-213ENST00000531018 KIDINS220Q9ULH0 1771 aa14.5□□□□□ -0.09
SYVN1-213ENST00000531018 REREQ9P2R6 1566 aa14.48□□□□□ -0.09
SYVN1-213ENST00000531018 ZNF644Q9H582 1327 aaPredicted RBP14.48□□□□□ -0.09
SYVN1-213ENST00000531018 ATP10AO60312 1499 aa14.48□□□□□ -0.09
SYVN1-213ENST00000531018 ADAMTSL3P82987 1691 aa14.48□□□□□ -0.09
SYVN1-213ENST00000531018 DIP2CQ9Y2E4 1556 aa14.47□□□□□ -0.09
SYVN1-213ENST00000531018 HNRNPMP52272 730 aaKnown RBP eCLIP14.47□□□□□ -0.09
SYVN1-213ENST00000531018 ZNF777Q9ULD5 760 aaPredicted RBP14.47□□□□□ -0.09
SYVN1-213ENST00000531018 BCORL1Q5H9F3 1711 aa14.46□□□□□ -0.09
SYVN1-213ENST00000531018 ARID4BQ4LE39 1312 aaPredicted RBP14.46□□□□□ -0.09
SYVN1-213ENST00000531018 ABCA6Q8N139 1617 aa14.46□□□□□ -0.09
SYVN1-213ENST00000531018 MYOM3Q5VTT5 1437 aa14.46□□□□□ -0.09
SYVN1-213ENST00000531018 MIA2Q96PC5 1412 aa14.46□□□□□ -0.09
SYVN1-213ENST00000531018 APLP2Q06481 763 aa14.45□□□□□ -0.1
SYVN1-213ENST00000531018 INO80Q9ULG1 1556 aaPredicted RBP14.45□□□□□ -0.1
SYVN1-213ENST00000531018 CAMSAP2Q08AD1 1489 aa14.44□□□□□ -0.1
SYVN1-213ENST00000531018 ARHGEF5Q12774 1597 aa14.44□□□□□ -0.1
SYVN1-213ENST00000531018 C9orf84Q5VXU9 1444 aa14.44□□□□□ -0.1
SYVN1-213ENST00000531018 PTPRMP28827 1452 aa14.43□□□□□ -0.1
SYVN1-213ENST00000531018 RSPH4AQ5TD94 716 aa14.42□□□□□ -0.1
SYVN1-213ENST00000531018 RTEL1-TNFRSF6BF6WH68 1400 aa14.41□□□□□ -0.1
SYVN1-213ENST00000531018 AGLP35573 1532 aa14.41□□□□□ -0.1
SYVN1-213ENST00000531018 ATP7AQ04656 1500 aa14.41□□□□□ -0.1
SYVN1-213ENST00000531018 MADDQ8WXG6 1647 aa14.41□□□□□ -0.1
SYVN1-213ENST00000531018 SPAG9O60271 1321 aaKnown RBP14.41□□□□□ -0.1
SYVN1-213ENST00000531018 CCDC141Q6ZP82 1450 aa14.4□□□□□ -0.1
SYVN1-213ENST00000531018 PLPPR3Q6T4P5 718 aa14.39□□□□□ -0.11
SYVN1-213ENST00000531018 PLXNC1O60486 1568 aa14.39□□□□□ -0.11
SYVN1-213ENST00000531018 TCOF1Q13428 1488 aaKnown RBP14.38□□□□□ -0.11
SYVN1-213ENST00000531018 FGD6Q6ZV73 1430 aa14.38□□□□□ -0.11
SYVN1-213ENST00000531018 PTPN23Q9H3S7 1636 aa14.37□□□□□ -0.11
SYVN1-213ENST00000531018 ADGBQ8N7X0 1667 aa14.37□□□□□ -0.11
SYVN1-213ENST00000531018 MAST1Q9Y2H9 1570 aa14.37□□□□□ -0.11
SYVN1-213ENST00000531018 RIMS1Q86UR5 1692 aaKnown RBP14.36□□□□□ -0.11
SYVN1-213ENST00000531018 A2MP01023 1474 aa14.34□□□□□ -0.11
SYVN1-213ENST00000531018 FER1L4A9Z1Z3 1794 aa14.34□□□□□ -0.11
SYVN1-213ENST00000531018 MLECQ14165 292 aa14.33□□□□□ -0.12
SYVN1-213ENST00000531018 CROCC2H7BZ55 1655 aa14.33□□□□□ -0.12
SYVN1-213ENST00000531018 DNMT1P26358 1616 aaKnown RBP14.32□□□□□ -0.12
SYVN1-213ENST00000531018 ABCC5O15440 1437 aa14.32□□□□□ -0.12
SYVN1-213ENST00000531018 MYT1LQ9UL68 1186 aa14.31□□□□□ -0.12
SYVN1-213ENST00000531018 DHX29Q7Z478 1369 aaKnown RBP14.31□□□□□ -0.12
SYVN1-213ENST00000531018 SHANK2Q9UPX8 1470 aa14.31□□□□□ -0.12
SYVN1-213ENST00000531018 TSPY4P0CV99 314 aa14.3□□□□□ -0.12
SYVN1-213ENST00000531018 TSPY10P0CW01 314 aa14.3□□□□□ -0.12
SYVN1-213ENST00000531018 LMTK3Q96Q04 1460 aa14.3□□□□□ -0.12
SYVN1-213ENST00000531018 DAPK1P53355 1430 aa14.28□□□□□ -0.12
SYVN1-213ENST00000531018 HSPA2P54652 639 aa14.28□□□□□ -0.12
SYVN1-213ENST00000531018 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.25□□□□□ -0.13
SYVN1-213ENST00000531018 MROH2AA6NES4 1674 aa14.25□□□□□ -0.13
SYVN1-213ENST00000531018 SETD1BQ9UPS6 1966 aaKnown RBP14.25□□□□□ -0.13
SYVN1-213ENST00000531018 EIF2AK4Q9P2K8 1649 aaKnown RBP14.24□□□□□ -0.13
SYVN1-213ENST00000531018 PPP6R1Q9UPN7 881 aa14.24□□□□□ -0.13
SYVN1-213ENST00000531018 ADGRL2O95490 1459 aa14.24□□□□□ -0.13
SYVN1-213ENST00000531018 CNTLNQ9NXG0 1405 aa14.24□□□□□ -0.13
SYVN1-213ENST00000531018 C3P01024 1663 aa14.23□□□□□ -0.13
SYVN1-213ENST00000531018 FBXO41Q8TF61 875 aa14.23□□□□□ -0.13
SYVN1-213ENST00000531018 DUOX2Q9NRD8 1548 aa14.23□□□□□ -0.13
SYVN1-213ENST00000531018 NCOA1Q15788 1441 aa14.23□□□□□ -0.13
SYVN1-213ENST00000531018 RNF17Q9BXT8 1623 aaKnown RBP14.23□□□□□ -0.13
SYVN1-213ENST00000531018 FAM135AQ9P2D6 1515 aa14.22□□□□□ -0.13
SYVN1-213ENST00000531018 PPARGC1BQ86YN6 1023 aaKnown RBP14.21□□□□□ -0.13
SYVN1-213ENST00000531018 PTPRKQ15262 1439 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms