RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 MTUS2Q5JR59 1369 aa27.17■■□□□ 1.94
CCS-205ENST00000530384 CDC42BPBQ9Y5S2 1711 aa27.16■■□□□ 1.94
CCS-205ENST00000530384 PREX2Q70Z35 1606 aa27.16■■□□□ 1.94
CCS-205ENST00000530384 SCAPERQ9BY12 1400 aa27.15■■□□□ 1.94
CCS-205ENST00000530384 CDC42BPAQ5VT25 1732 aa27.12■■□□□ 1.93
CCS-205ENST00000530384 EHBP1L1Q8N3D4 1523 aa27.11■■□□□ 1.93
CCS-205ENST00000530384 ZMYM4Q5VZL5 1548 aa27.11■■□□□ 1.93
CCS-205ENST00000530384 POGZQ7Z3K3 1410 aa27.1■■□□□ 1.93
CCS-205ENST00000530384 MAGI2Q86UL8 1455 aa27.06■■□□□ 1.92
CCS-205ENST00000530384 ARHGEF40Q8TER5 1519 aa27.06■■□□□ 1.92
CCS-205ENST00000530384 TIAM1Q13009 1591 aa27.05■■□□□ 1.92
CCS-205ENST00000530384 GPATCH8Q9UKJ3 1502 aaKnown RBP27.05■■□□□ 1.92
CCS-205ENST00000530384 CCNB3Q8WWL7 1395 aa27.04■■□□□ 1.92
CCS-205ENST00000530384 ZNF518AQ6AHZ1 1483 aa27.03■■□□□ 1.92
CCS-205ENST00000530384 ZFYVE16Q7Z3T8 1539 aa27.01■■□□□ 1.91
CCS-205ENST00000530384 ABCC1P33527 1531 aa27■■□□□ 1.91
CCS-205ENST00000530384 MAP3K1Q13233 1512 aa26.99■■□□□ 1.91
CCS-205ENST00000530384 SUPT6HQ7KZ85 1726 aaKnown RBP26.98■■□□□ 1.91
CCS-205ENST00000530384 ITSN2Q9NZM3 1697 aa26.98■■□□□ 1.91
CCS-205ENST00000530384 KDM5CP41229 1560 aa26.97■■□□□ 1.91
CCS-205ENST00000530384 CFDP1Q9UEE9 299 aaPredicted RBP26.97■■□□□ 1.91
CCS-205ENST00000530384 YEATS2Q9ULM3 1422 aa26.96■■□□□ 1.91
CCS-205ENST00000530384 ZNF777Q9ULD5 760 aaPredicted RBP26.95■■□□□ 1.9
CCS-205ENST00000530384 SAMD9LQ8IVG5 1584 aa26.95■■□□□ 1.9
CCS-205ENST00000530384 AFAP1Q8N556 730 aa26.94■■□□□ 1.9
CCS-205ENST00000530384 ARHGEF12Q9NZN5 1544 aa26.94■■□□□ 1.9
CCS-205ENST00000530384 LRRC9Q6ZRR7 1453 aa26.93■■□□□ 1.9
CCS-205ENST00000530384 PLEKHH2Q8IVE3 1493 aa26.93■■□□□ 1.9
CCS-205ENST00000530384 ARID4BQ4LE39 1312 aaPredicted RBP26.92■■□□□ 1.9
CCS-205ENST00000530384 NCOA2Q15596 1464 aa26.92■■□□□ 1.9
CCS-205ENST00000530384 HECW2Q9P2P5 1572 aa26.92■■□□□ 1.9
CCS-205ENST00000530384 TRAPPC8Q9Y2L5 1435 aa26.91■■□□□ 1.9
CCS-205ENST00000530384 SYCP2Q9BX26 1530 aa26.89■■□□□ 1.89
CCS-205ENST00000530384 KIAA1107Q9UPP5 1409 aa26.89■■□□□ 1.89
CCS-205ENST00000530384 ATP10AO60312 1499 aa26.88■■□□□ 1.89
CCS-205ENST00000530384 MLH3Q9UHC1 1453 aa26.88■■□□□ 1.89
CCS-205ENST00000530384 APLP2Q06481 763 aa26.88■■□□□ 1.89
CCS-205ENST00000530384 BCORL1Q5H9F3 1711 aa26.87■■□□□ 1.89
CCS-205ENST00000530384 MYT1LQ9UL68 1186 aa26.87■■□□□ 1.89
CCS-205ENST00000530384 ADAMTSL3P82987 1691 aa26.86■■□□□ 1.89
CCS-205ENST00000530384 C9orf84Q5VXU9 1444 aa26.85■■□□□ 1.89
CCS-205ENST00000530384 HNRNPMP52272 730 aaKnown RBP eCLIP26.83■■□□□ 1.89
CCS-205ENST00000530384 KANK4Q5T7N3 995 aaPredicted RBP26.83■■□□□ 1.89
CCS-205ENST00000530384 DIP2CQ9Y2E4 1556 aa26.81■■□□□ 1.88
CCS-205ENST00000530384 SIGLEC1Q9BZZ2 1709 aa26.81■■□□□ 1.88
CCS-205ENST00000530384 KIDINS220Q9ULH0 1771 aa26.79■■□□□ 1.88
CCS-205ENST00000530384 ABCA6Q8N139 1617 aa26.79■■□□□ 1.88
CCS-205ENST00000530384 ZNF644Q9H582 1327 aaPredicted RBP26.78■■□□□ 1.88
CCS-205ENST00000530384 REREQ9P2R6 1566 aa26.78■■□□□ 1.88
CCS-205ENST00000530384 SPAG9O60271 1321 aaKnown RBP26.77■■□□□ 1.88
CCS-205ENST00000530384 MADDQ8WXG6 1647 aa26.76■■□□□ 1.87
CCS-205ENST00000530384 CAMSAP2Q08AD1 1489 aa26.74■■□□□ 1.87
CCS-205ENST00000530384 MBD5Q9P267 1494 aa26.74■■□□□ 1.87
CCS-205ENST00000530384 ATP7AQ04656 1500 aa26.72■■□□□ 1.87
CCS-205ENST00000530384 PTPRMP28827 1452 aa26.72■■□□□ 1.87
CCS-205ENST00000530384 INO80Q9ULG1 1556 aaPredicted RBP26.71■■□□□ 1.87
CCS-205ENST00000530384 MYOM3Q5VTT5 1437 aa26.7■■□□□ 1.86
CCS-205ENST00000530384 MLECQ14165 292 aa26.69■■□□□ 1.86
CCS-205ENST00000530384 RSPH4AQ5TD94 716 aa26.69■■□□□ 1.86
CCS-205ENST00000530384 RIMS1Q86UR5 1692 aaKnown RBP26.69■■□□□ 1.86
CCS-205ENST00000530384 AGLP35573 1532 aa26.69■■□□□ 1.86
CCS-205ENST00000530384 MIA2Q96PC5 1412 aa26.68■■□□□ 1.86
CCS-205ENST00000530384 FER1L4A9Z1Z3 1794 aa26.67■■□□□ 1.86
CCS-205ENST00000530384 CCDC141Q6ZP82 1450 aa26.67■■□□□ 1.86
CCS-205ENST00000530384 ARHGEF5Q12774 1597 aa26.65■■□□□ 1.86
CCS-205ENST00000530384 RTEL1-TNFRSF6BF6WH68 1400 aa26.65■■□□□ 1.86
CCS-205ENST00000530384 ADGBQ8N7X0 1667 aa26.61■■□□□ 1.85
CCS-205ENST00000530384 A2MP01023 1474 aa26.59■■□□□ 1.85
CCS-205ENST00000530384 PLXNC1O60486 1568 aa26.58■■□□□ 1.85
CCS-205ENST00000530384 TSPY4P0CV99 314 aa26.56■■□□□ 1.84
CCS-205ENST00000530384 TSPY10P0CW01 314 aa26.56■■□□□ 1.84
CCS-205ENST00000530384 PTPN23Q9H3S7 1636 aa26.54■■□□□ 1.84
CCS-205ENST00000530384 FGD6Q6ZV73 1430 aa26.52■■□□□ 1.84
CCS-205ENST00000530384 ESF1Q9H501 851 aaKnown RBP26.51■■□□□ 1.83
CCS-205ENST00000530384 MAST1Q9Y2H9 1570 aa26.5■■□□□ 1.83
CCS-205ENST00000530384 DHX29Q7Z478 1369 aaKnown RBP26.49■■□□□ 1.83
CCS-205ENST00000530384 PLPPR3Q6T4P5 718 aa26.48■■□□□ 1.83
CCS-205ENST00000530384 TCOF1Q13428 1488 aaKnown RBP26.48■■□□□ 1.83
CCS-205ENST00000530384 CNTLNQ9NXG0 1405 aa26.48■■□□□ 1.83
CCS-205ENST00000530384 CROCC2H7BZ55 1655 aa26.42■■□□□ 1.82
CCS-205ENST00000530384 SHANK2Q9UPX8 1470 aa26.42■■□□□ 1.82
CCS-205ENST00000530384 DNMT1P26358 1616 aaKnown RBP26.41■■□□□ 1.82
CCS-205ENST00000530384 GGT6Q6P531 493 aa26.41■■□□□ 1.82
CCS-205ENST00000530384 PPP6R1Q9UPN7 881 aa26.41■■□□□ 1.82
CCS-205ENST00000530384 MROH2AA6NES4 1674 aa26.41■■□□□ 1.82
CCS-205ENST00000530384 C3P01024 1663 aa26.41■■□□□ 1.82
CCS-205ENST00000530384 CEBPAP49715 358 aaPredicted RBP26.4■■□□□ 1.82
CCS-205ENST00000530384 ABCC5O15440 1437 aa26.39■■□□□ 1.82
CCS-205ENST00000530384 DAPK1P53355 1430 aa26.39■■□□□ 1.81
CCS-205ENST00000530384 LMTK3Q96Q04 1460 aa26.38■■□□□ 1.81
CCS-205ENST00000530384 SETD1BQ9UPS6 1966 aaKnown RBP26.38■■□□□ 1.81
CCS-205ENST00000530384 KIF3BO15066 747 aa26.37■■□□□ 1.81
CCS-205ENST00000530384 CLTCQ00610 1675 aaKnown RBP26.35■■□□□ 1.81
CCS-205ENST00000530384 PREX1Q8TCU6 1659 aa26.34■■□□□ 1.81
CCS-205ENST00000530384 ZMYM3Q14202 1370 aa26.33■■□□□ 1.8
CCS-205ENST00000530384 FAM50AQ14320 339 aaKnown RBP26.32■■□□□ 1.8
CCS-205ENST00000530384 DUOX2Q9NRD8 1548 aa26.32■■□□□ 1.8
CCS-205ENST00000530384 FAM135AQ9P2D6 1515 aa26.32■■□□□ 1.8
CCS-205ENST00000530384 EIF2AK4Q9P2K8 1649 aaKnown RBP26.32■■□□□ 1.8
CCS-205ENST00000530384 KIF15Q9NS87 1388 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms