RNA–Protein interactions for RNA: ENST00000530262.5

MACF1-229, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 6,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-229ENST00000530262 NUDCQ9Y266 331 aa9.45□□□□□ -0.9
MACF1-229ENST00000530262 MAPK8IP3Q9UPT6 1336 aa9.45□□□□□ -0.9
MACF1-229ENST00000530262 KANK1Q14678 1352 aa9.44□□□□□ -0.9
MACF1-229ENST00000530262 FAM69CQ0P6D2 419 aa9.44□□□□□ -0.9
MACF1-229ENST00000530262 SUPT16HQ9Y5B9 1047 aaKnown RBP9.44□□□□□ -0.9
MACF1-229ENST00000530262 TIMELESSQ9UNS1 1208 aa9.44□□□□□ -0.9
MACF1-229ENST00000530262 POLA1P09884 1462 aaPredicted RBP9.44□□□□□ -0.9
MACF1-229ENST00000530262 PNNQ9H307 717 aaKnown RBP9.43□□□□□ -0.9
MACF1-229ENST00000530262 CUX1P39880 1505 aa9.43□□□□□ -0.9
MACF1-229ENST00000530262 IFT140Q96RY7 1462 aa9.43□□□□□ -0.9
MACF1-229ENST00000530262 KIF3BO15066 747 aa9.43□□□□□ -0.9
MACF1-229ENST00000530262 PRDM2Q13029 1718 aa9.43□□□□□ -0.9
MACF1-229ENST00000530262 ZRSR1Q15695 479 aaKnown RBP9.43□□□□□ -0.9
MACF1-229ENST00000530262 SNAPC4Q5SXM2 1469 aa9.42□□□□□ -0.9
MACF1-229ENST00000530262 LMOD2Q6P5Q4 547 aa9.42□□□□□ -0.9
MACF1-229ENST00000530262 HAP1P54257 671 aaPredicted RBP9.41□□□□□ -0.9
MACF1-229ENST00000530262 PTMAP06454 111 aaKnown RBP9.41□□□□□ -0.9
MACF1-229ENST00000530262 SPAG9O60271 1321 aaKnown RBP9.41□□□□□ -0.9
MACF1-229ENST00000530262 SAFB2Q14151 953 aaKnown RBP eCLIP9.41□□□□□ -0.95e-7■■□□□ 13.1
MACF1-229ENST00000530262 POGKQ9P215 609 aa9.41□□□□□ -0.9
MACF1-229ENST00000530262 CCDC18Q5T9S5 1454 aa9.4□□□□□ -0.9
MACF1-229ENST00000530262 ERICH6BQ5W0A0 696 aa9.4□□□□□ -0.91
MACF1-229ENST00000530262 DCAF11Q8TEB1 546 aa9.4□□□□□ -0.91
MACF1-229ENST00000530262 NUTM2DQ5VT03 806 aaPredicted RBP9.4□□□□□ -0.91
MACF1-229ENST00000530262 PKD2Q13563 968 aa9.39□□□□□ -0.91
MACF1-229ENST00000530262 LAMC3Q9Y6N6 1575 aa9.39□□□□□ -0.91
MACF1-229ENST00000530262 PRG4Q92954 1404 aaPredicted RBP9.39□□□□□ -0.91
MACF1-229ENST00000530262 TNNT2P45379 298 aaPredicted RBP9.39□□□□□ -0.91
MACF1-229ENST00000530262 NOP58Q9Y2X3 529 aaKnown RBP9.39□□□□□ -0.91
MACF1-229ENST00000530262 CCER2I3L3R5 266 aa9.39□□□□□ -0.91
MACF1-229ENST00000530262 TMF1P82094 1093 aa9.38□□□□□ -0.91
MACF1-229ENST00000530262 DNMBPQ6XZF7 1577 aa9.38□□□□□ -0.91
MACF1-229ENST00000530262 STK26Q9P289 416 aa9.38□□□□□ -0.91
MACF1-229ENST00000530262 SENP3-EIF4A1A0A087X0R7 540 aa9.37□□□□□ -0.91
MACF1-229ENST00000530262 NUP155O75694 1391 aa9.37□□□□□ -0.91
MACF1-229ENST00000530262 CFAP44Q96MT7 982 aa9.37□□□□□ -0.91
MACF1-229ENST00000530262 GOLGA6L6A8MZA4 724 aa9.36□□□□□ -0.91
MACF1-229ENST00000530262 WASHC2CQ9Y4E1 1318 aa9.36□□□□□ -0.91
MACF1-229ENST00000530262 SETD5Q9C0A6 1442 aa9.36□□□□□ -0.91
MACF1-229ENST00000530262 ANKRD30AQ9BXX3 1397 aa9.36□□□□□ -0.91
MACF1-229ENST00000530262 LAS1LQ9Y4W2 734 aaKnown RBP9.36□□□□□ -0.91
MACF1-229ENST00000530262 HSP90AB1P08238 724 aaKnown RBP9.35□□□□□ -0.91
MACF1-229ENST00000530262 TOP2BQ02880 1626 aa9.35□□□□□ -0.91
MACF1-229ENST00000530262 DNTTIP2Q5QJE6 756 aaKnown RBP9.35□□□□□ -0.91
MACF1-229ENST00000530262 CC2D1BQ5T0F9 858 aaKnown RBP9.34□□□□□ -0.91
MACF1-229ENST00000530262 FRAT1Q92837 279 aaPredicted RBP9.34□□□□□ -0.91
MACF1-229ENST00000530262 NEUROD2Q15784 382 aa9.34□□□□□ -0.91
MACF1-229ENST00000530262 RGS3P49796 1198 aa9.33□□□□□ -0.92
MACF1-229ENST00000530262 SOX12O15370 315 aa9.33□□□□□ -0.92
MACF1-229ENST00000530262 HSCBQ8IWL3 235 aa9.32□□□□□ -0.92
MACF1-229ENST00000530262 ZNF644Q9H582 1327 aaPredicted RBP9.32□□□□□ -0.92
MACF1-229ENST00000530262 HDGFP51858 240 aaKnown RBP9.32□□□□□ -0.92
MACF1-229ENST00000530262 URB2Q14146 1524 aaKnown RBP9.32□□□□□ -0.92
MACF1-229ENST00000530262 MPHOSPH9Q99550 1183 aa9.31□□□□□ -0.92
MACF1-229ENST00000530262 OS9Q13438 667 aaPredicted RBP9.31□□□□□ -0.92
MACF1-229ENST00000530262 L1TD1Q5T7N2 865 aaKnown RBP9.31□□□□□ -0.92
MACF1-229ENST00000530262 RAB3GAP2Q9H2M9 1393 aa9.31□□□□□ -0.92
MACF1-229ENST00000530262 ZNF608Q9ULD9 1512 aaPredicted RBP9.3□□□□□ -0.92
MACF1-229ENST00000530262 U2SURPO15042 1029 aaKnown RBP9.3□□□□□ -0.92
MACF1-229ENST00000530262 NRDCO43847 1150 aa9.3□□□□□ -0.92
MACF1-229ENST00000530262 MCCP23508 829 aa9.3□□□□□ -0.92
MACF1-229ENST00000530262 KTN1Q86UP2 1357 aaKnown RBP9.3□□□□□ -0.92
MACF1-229ENST00000530262 PTMSP20962 102 aa9.3□□□□□ -0.92
MACF1-229ENST00000530262 NAP1L5Q96NT1 182 aaPredicted RBP9.3□□□□□ -0.92
MACF1-229ENST00000530262 SRPK2P78362 688 aaKnown RBP9.3□□□□□ -0.92
MACF1-229ENST00000530262 MORC1Q86VD1 984 aa9.28□□□□□ -0.92
MACF1-229ENST00000530262 B4GALNT3Q6L9W6 998 aa9.28□□□□□ -0.92
MACF1-229ENST00000530262 HSPA5P11021 654 aaKnown RBP9.28□□□□□ -0.92
MACF1-229ENST00000530262 FGD1P98174 961 aa9.28□□□□□ -0.92
MACF1-229ENST00000530262 KCNJ4P48050 445 aa9.27□□□□□ -0.92
MACF1-229ENST00000530262 AEBP2Q6ZN18 517 aaPredicted RBP9.27□□□□□ -0.92
MACF1-229ENST00000530262 PEG3Q9GZU2 1588 aa9.27□□□□□ -0.93
MACF1-229ENST00000530262 RALBP1Q15311 655 aa9.27□□□□□ -0.93
MACF1-229ENST00000530262 RSPH4AQ5TD94 716 aa9.27□□□□□ -0.93
MACF1-229ENST00000530262 KIF21BO75037 1637 aa9.26□□□□□ -0.93
MACF1-229ENST00000530262 NUTM2FA1L443 756 aa9.26□□□□□ -0.93
MACF1-229ENST00000530262 IPO8O15397 1037 aaKnown RBP9.26□□□□□ -0.93
MACF1-229ENST00000530262 CALD1Q05682 793 aaKnown RBP9.26□□□□□ -0.93
MACF1-229ENST00000530262 CHAF1AQ13111 956 aaPredicted RBP9.26□□□□□ -0.93
MACF1-229ENST00000530262 SYNJ2O15056 1496 aa9.25□□□□□ -0.93
MACF1-229ENST00000530262 AFAP1Q8N556 730 aa9.25□□□□□ -0.93
MACF1-229ENST00000530262 GOLGA6L4A6NEF3 574 aa9.25□□□□□ -0.93
MACF1-229ENST00000530262 TPRNQ4KMQ1 711 aa9.25□□□□□ -0.93
MACF1-229ENST00000530262 EID1Q9Y6B2 187 aa9.25□□□□□ -0.93
MACF1-229ENST00000530262 EIF3AQ14152 1382 aaKnown RBP9.25□□□□□ -0.93
MACF1-229ENST00000530262 ABCA10Q8WWZ4 1543 aa9.25□□□□□ -0.93
MACF1-229ENST00000530262 PLCB2Q00722 1185 aa9.25□□□□□ -0.93
MACF1-229ENST00000530262 ARHGAP5Q13017 1502 aa9.24□□□□□ -0.93
MACF1-229ENST00000530262 PAK3O75914 559 aaPredicted RBP9.24□□□□□ -0.93
MACF1-229ENST00000530262 HDGFL2Q7Z4V5 671 aaPredicted RBP9.24□□□□□ -0.93
MACF1-229ENST00000530262 MSNP26038 577 aaKnown RBP9.23□□□□□ -0.93
MACF1-229ENST00000530262 ROCK2O75116 1388 aaKnown RBP9.23□□□□□ -0.93
MACF1-229ENST00000530262 ARAP1Q96P48 1450 aa9.23□□□□□ -0.93
MACF1-229ENST00000530262 RTF1Q92541 710 aaKnown RBP9.23□□□□□ -0.93
MACF1-229ENST00000530262 GOLGA2Q08379 1002 aa9.22□□□□□ -0.93
MACF1-229ENST00000530262 TCERG1O14776 1098 aaKnown RBP9.22□□□□□ -0.93
MACF1-229ENST00000530262 ERICH3Q5RHP9 1530 aa9.22□□□□□ -0.93
MACF1-229ENST00000530262 RWDD1Q9H446 243 aaPredicted RBP9.22□□□□□ -0.93
MACF1-229ENST00000530262 NPHP1O15259 732 aa9.21□□□□□ -0.93
MACF1-229ENST00000530262 GBP4Q96PP9 640 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms