RNA–Protein interactions for RNA: ENST00000528773.1

SUSD1-208, Transcript of sushi domain containing 1, humanhuman

TSL 4

Gene SUSD1, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-208ENST00000528773 PRDM2Q13029 1718 aa9.73□□□□□ -0.85
SUSD1-208ENST00000528773 ARAP1Q96P48 1450 aa9.72□□□□□ -0.85
SUSD1-208ENST00000528773 TOPBP1Q92547 1522 aa9.72□□□□□ -0.85
SUSD1-208ENST00000528773 CYB5RLQ6IPT4 315 aa9.72□□□□□ -0.85
SUSD1-208ENST00000528773 EIF4G3O43432 1585 aaKnown RBP9.71□□□□□ -0.86
SUSD1-208ENST00000528773 PDCD7Q8N8D1 485 aaKnown RBP9.69□□□□□ -0.86
SUSD1-208ENST00000528773 TARBP1Q13395 1621 aaKnown RBP9.68□□□□□ -0.86
SUSD1-208ENST00000528773 ABCC8Q09428 1581 aa9.68□□□□□ -0.86
SUSD1-208ENST00000528773 CCDC88BA6NC98 1476 aa9.67□□□□□ -0.86
SUSD1-208ENST00000528773 PLEKHG5O94827 1062 aa9.67□□□□□ -0.86
SUSD1-208ENST00000528773 AQRO60306 1485 aaKnown RBP eCLIP9.66□□□□□ -0.86
SUSD1-208ENST00000528773 CHD1O14646 1710 aa9.65□□□□□ -0.86
SUSD1-208ENST00000528773 DNMBPQ6XZF7 1577 aa9.65□□□□□ -0.86
SUSD1-208ENST00000528773 RNF166Q96A37 237 aaPredicted RBP9.63□□□□□ -0.87
SUSD1-208ENST00000528773 CLASP1Q7Z460 1538 aa9.61□□□□□ -0.87
SUSD1-208ENST00000528773 POLA1P09884 1462 aaPredicted RBP9.61□□□□□ -0.87
SUSD1-208ENST00000528773 C3orf67Q6ZVT6 689 aa9.61□□□□□ -0.87
SUSD1-208ENST00000528773 PCDHB8Q9UN66 801 aa9.6□□□□□ -0.87
SUSD1-208ENST00000528773 HOXB3P14651 431 aaPredicted RBP9.58□□□□□ -0.88
SUSD1-208ENST00000528773 PLCD3Q8N3E9 789 aa9.58□□□□□ -0.88
SUSD1-208ENST00000528773 FAM212AQ96EL1 285 aa9.57□□□□□ -0.88
SUSD1-208ENST00000528773 WDR97A6NE52 1622 aa9.56□□□□□ -0.88
SUSD1-208ENST00000528773 PYGBP11216 843 aa9.56□□□□□ -0.88
SUSD1-208ENST00000528773 RAD54L2Q9Y4B4 1467 aa9.55□□□□□ -0.88
SUSD1-208ENST00000528773 TDRD9Q8NDG6 1382 aaKnown RBP9.55□□□□□ -0.88
SUSD1-208ENST00000528773 SOGA1O94964 1423 aa9.54□□□□□ -0.88
SUSD1-208ENST00000528773 SNAPC4Q5SXM2 1469 aa9.53□□□□□ -0.88
SUSD1-208ENST00000528773 MAGI1Q96QZ7 1491 aaPredicted RBP9.53□□□□□ -0.88
SUSD1-208ENST00000528773 L3MBTL3Q96JM7 780 aaPredicted RBP9.52□□□□□ -0.89
SUSD1-208ENST00000528773 MYT1LQ9UL68 1186 aa9.52□□□□□ -0.89
SUSD1-208ENST00000528773 SYNJ1O43426 1573 aa9.51□□□□□ -0.89
SUSD1-208ENST00000528773 HOXB1P14653 301 aaPredicted RBP9.5□□□□□ -0.89
SUSD1-208ENST00000528773 SYNJ2O15056 1496 aa9.5□□□□□ -0.89
SUSD1-208ENST00000528773 GRIN2BQ13224 1484 aa9.49□□□□□ -0.89
SUSD1-208ENST00000528773 GAPVD1Q14C86 1478 aa9.49□□□□□ -0.89
SUSD1-208ENST00000528773 DPY19L2Q6NUT2 758 aa9.49□□□□□ -0.89
SUSD1-208ENST00000528773 FGD5Q6ZNL6 1462 aa9.48□□□□□ -0.89
SUSD1-208ENST00000528773 CHMP7Q8WUX9 453 aaPredicted RBP9.48□□□□□ -0.89
SUSD1-208ENST00000528773 ERBB3P21860 1342 aa9.48□□□□□ -0.89
SUSD1-208ENST00000528773 CUX1P39880 1505 aa9.46□□□□□ -0.89
SUSD1-208ENST00000528773 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.46□□□□□ -0.9
SUSD1-208ENST00000528773 ZBTB47Q9UFB7 747 aaPredicted RBP9.46□□□□□ -0.9
SUSD1-208ENST00000528773 MKRN3Q13064 507 aaKnown RBP9.44□□□□□ -0.9
SUSD1-208ENST00000528773 DCAF8Q5TAQ9 597 aa9.44□□□□□ -0.9
SUSD1-208ENST00000528773 ILDR1Q86SU0 546 aaPredicted RBP9.44□□□□□ -0.9
SUSD1-208ENST00000528773 VARS2Q5ST30 1063 aaKnown RBP9.43□□□□□ -0.9
SUSD1-208ENST00000528773 ERCC6L2Q5T890 1561 aa9.42□□□□□ -0.9
SUSD1-208ENST00000528773 ABCA5Q8WWZ7 1642 aa9.41□□□□□ -0.9
SUSD1-208ENST00000528773 ABCA10Q8WWZ4 1543 aa9.41□□□□□ -0.9
SUSD1-208ENST00000528773 NUP160Q12769 1436 aa9.39□□□□□ -0.91
SUSD1-208ENST00000528773 PBRM1Q86U86 1689 aa9.39□□□□□ -0.91
SUSD1-208ENST00000528773 ZNF710Q8N1W2 664 aa9.39□□□□□ -0.91
SUSD1-208ENST00000528773 SHROOM2Q13796 1616 aa9.38□□□□□ -0.91
SUSD1-208ENST00000528773 GRIN2AQ12879 1464 aa9.37□□□□□ -0.91
SUSD1-208ENST00000528773 GOLGA2Q08379 1002 aa9.37□□□□□ -0.91
SUSD1-208ENST00000528773 CEP170Q5SW79 1584 aa9.37□□□□□ -0.91
SUSD1-208ENST00000528773 KIF13AQ9H1H9 1805 aa9.36□□□□□ -0.91
SUSD1-208ENST00000528773 ZNF687Q8N1G0 1237 aa9.36□□□□□ -0.91
SUSD1-208ENST00000528773 EHMT2Q96KQ7 1210 aa9.34□□□□□ -0.91
SUSD1-208ENST00000528773 BOLA1Q9Y3E2 137 aa9.34□□□□□ -0.91
SUSD1-208ENST00000528773 ADAMTS12P58397 1594 aa9.33□□□□□ -0.92
SUSD1-208ENST00000528773 DOK7Q18PE1 504 aa9.33□□□□□ -0.92
SUSD1-208ENST00000528773 PSEN1P49768 467 aa9.31□□□□□ -0.92
SUSD1-208ENST00000528773 ABCC10Q5T3U5 1492 aa9.3□□□□□ -0.92
SUSD1-208ENST00000528773 ZNF467Q7Z7K2 595 aaPredicted RBP9.3□□□□□ -0.92
SUSD1-208ENST00000528773 FHAD1B1AJZ9 1412 aa9.3□□□□□ -0.92
SUSD1-208ENST00000528773 KDM4FA0A1W2PPD8 638 aa9.29□□□□□ -0.92
SUSD1-208ENST00000528773 MAPKBP1O60336 1514 aa9.28□□□□□ -0.92
SUSD1-208ENST00000528773 PTGER2P43116 358 aa9.28□□□□□ -0.92
SUSD1-208ENST00000528773 ANKRD13DQ6ZTN6 518 aa9.28□□□□□ -0.92
SUSD1-208ENST00000528773 WRNQ14191 1432 aaPredicted RBP eCLIP9.28□□□□□ -0.92
SUSD1-208ENST00000528773 ERICH3Q5RHP9 1530 aa9.26□□□□□ -0.93
SUSD1-208ENST00000528773 PRG4Q92954 1404 aaPredicted RBP9.26□□□□□ -0.93
SUSD1-208ENST00000528773 GPR153Q6NV75 609 aa9.26□□□□□ -0.93
SUSD1-208ENST00000528773 TMEM92Q6UXU6 159 aa9.26□□□□□ -0.93
SUSD1-208ENST00000528773 PLA2G2EQ9NZK7 142 aa9.26□□□□□ -0.93
SUSD1-208ENST00000528773 DIP2BQ9P265 1576 aa9.25□□□□□ -0.93
SUSD1-208ENST00000528773 JPH4Q96JJ6 628 aa9.25□□□□□ -0.93
SUSD1-208ENST00000528773 FAM69CQ0P6D2 419 aa9.24□□□□□ -0.93
SUSD1-208ENST00000528773 TOP2BQ02880 1626 aa9.23□□□□□ -0.93
SUSD1-208ENST00000528773 BIVM-ERCC5R4GMW8 1640 aa9.23□□□□□ -0.93
SUSD1-208ENST00000528773 RIMBP2O15034 1052 aa9.22□□□□□ -0.93
SUSD1-208ENST00000528773 CABP2Q9NPB3 220 aa9.22□□□□□ -0.93
SUSD1-208ENST00000528773 ADCY10Q96PN6 1610 aa9.22□□□□□ -0.93
SUSD1-208ENST00000528773 RUSC2Q8N2Y8 1516 aa9.21□□□□□ -0.93
SUSD1-208ENST00000528773 G3V3G9 751 aa9.21□□□□□ -0.94
SUSD1-208ENST00000528773 CHRM1P11229 460 aaPredicted RBP9.19□□□□□ -0.94
SUSD1-208ENST00000528773 ZSWIM6Q9HCJ5 1215 aa9.19□□□□□ -0.94
SUSD1-208ENST00000528773 KDM6BO15054 1643 aa9.19□□□□□ -0.94
SUSD1-208ENST00000528773 LSM11P83369 360 aaKnown RBP eCLIP9.18□□□□□ -0.94
SUSD1-208ENST00000528773 PDAP1Q13442 181 aaKnown RBP9.16□□□□□ -0.94
SUSD1-208ENST00000528773 ARSIQ5FYB1 569 aa9.16□□□□□ -0.94
SUSD1-208ENST00000528773 KHSRPQ92945 711 aaKnown RBP eCLIP9.16□□□□□ -0.945e-8■■■□□ 16.2
SUSD1-208ENST00000528773 POTEEQ6S8J3 1075 aa9.15□□□□□ -0.94
SUSD1-208ENST00000528773 KIAA0586Q9BVV6 1533 aa9.15□□□□□ -0.95
SUSD1-208ENST00000528773 GSE1Q14687 1217 aa9.14□□□□□ -0.95
SUSD1-208ENST00000528773 PPRC1Q5VV67 1664 aaKnown RBP9.13□□□□□ -0.95
SUSD1-208ENST00000528773 GLI2P10070 1586 aa9.12□□□□□ -0.95
SUSD1-208ENST00000528773 IGF1RP08069 1367 aa9.12□□□□□ -0.95
SUSD1-208ENST00000528773 COL17A1Q9UMD9 1497 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms