RNA–Protein interactions for RNA: ENST00000528494.5

ATG13-211, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 2,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-211ENST00000528494 KDM5BQ9UGL1 1544 aa18.72■□□□□ 0.59
ATG13-211ENST00000528494 ZCCHC11Q5TAX3 1644 aaKnown RBP18.71■□□□□ 0.59
ATG13-211ENST00000528494 CAMSAP2Q08AD1 1489 aa18.7■□□□□ 0.58
ATG13-211ENST00000528494 ABCC5O15440 1437 aa18.68■□□□□ 0.58
ATG13-211ENST00000528494 DAPK1P53355 1430 aa18.68■□□□□ 0.58
ATG13-211ENST00000528494 HFM1A2PYH4 1435 aa18.68■□□□□ 0.58
ATG13-211ENST00000528494 NAIPQ13075 1403 aa18.68■□□□□ 0.58
ATG13-211ENST00000528494 HNRNPMP52272 730 aaKnown RBP eCLIP18.67■□□□□ 0.58
ATG13-211ENST00000528494 ITSN2Q9NZM3 1697 aa18.66■□□□□ 0.58
ATG13-211ENST00000528494 NPM1P06748 294 aaKnown RBP eCLIP18.66■□□□□ 0.58
ATG13-211ENST00000528494 CDC42BPAQ5VT25 1732 aa18.65■□□□□ 0.58
ATG13-211ENST00000528494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.64■□□□□ 0.58
ATG13-211ENST00000528494 CYB5RLQ6IPT4 315 aa18.64■□□□□ 0.58
ATG13-211ENST00000528494 TTC37Q6PGP7 1564 aa18.63■□□□□ 0.57
ATG13-211ENST00000528494 DNMT1P26358 1616 aaKnown RBP18.61■□□□□ 0.57
ATG13-211ENST00000528494 TRIM52Q96A61 297 aa18.6■□□□□ 0.57
ATG13-211ENST00000528494 CLSPNQ9HAW4 1339 aa18.59■□□□□ 0.57
ATG13-211ENST00000528494 ARHGAP5Q13017 1502 aa18.59■□□□□ 0.57
ATG13-211ENST00000528494 WDR7Q9Y4E6 1490 aa18.58■□□□□ 0.57
ATG13-211ENST00000528494 ASXL2Q76L83 1435 aa18.58■□□□□ 0.56
ATG13-211ENST00000528494 TSPY4P0CV99 314 aa18.57■□□□□ 0.56
ATG13-211ENST00000528494 TSPY10P0CW01 314 aa18.57■□□□□ 0.56
ATG13-211ENST00000528494 AKNAQ7Z591 1439 aa18.57■□□□□ 0.56
ATG13-211ENST00000528494 CDC42BPBQ9Y5S2 1711 aa18.57■□□□□ 0.56
ATG13-211ENST00000528494 BCL11AQ9H165 835 aa18.56■□□□□ 0.56
ATG13-211ENST00000528494 ROCK1Q13464 1354 aa18.55■□□□□ 0.56
ATG13-211ENST00000528494 PREX2Q70Z35 1606 aa18.55■□□□□ 0.56
ATG13-211ENST00000528494 SIN3AQ96ST3 1273 aa18.55■□□□□ 0.56
ATG13-211ENST00000528494 KDM6BO15054 1643 aa18.55■□□□□ 0.56
ATG13-211ENST00000528494 EFCAB2Q5VUJ9 269 aa18.54■□□□□ 0.56
ATG13-211ENST00000528494 MAPKBP1O60336 1514 aa18.54■□□□□ 0.56
ATG13-211ENST00000528494 PLCH2O75038 1416 aa18.54■□□□□ 0.56
ATG13-211ENST00000528494 SAMD9LQ8IVG5 1584 aa18.54■□□□□ 0.56
ATG13-211ENST00000528494 NCOA1Q15788 1441 aa18.53■□□□□ 0.56
ATG13-211ENST00000528494 MBD5Q9P267 1494 aa18.52■□□□□ 0.56
ATG13-211ENST00000528494 C9orf84Q5VXU9 1444 aa18.51■□□□□ 0.55
ATG13-211ENST00000528494 ANKRD30AQ9BXX3 1397 aa18.51■□□□□ 0.55
ATG13-211ENST00000528494 DIEXFQ68CQ4 756 aaKnown RBP18.5■□□□□ 0.55
ATG13-211ENST00000528494 MYO5CQ9NQX4 1742 aa18.5■□□□□ 0.55
ATG13-211ENST00000528494 SYCP2Q9BX26 1530 aa18.5■□□□□ 0.55
ATG13-211ENST00000528494 GCC2Q8IWJ2 1684 aa18.49■□□□□ 0.55
ATG13-211ENST00000528494 RIMBP3CA6NJZ7 1639 aa18.48■□□□□ 0.55
ATG13-211ENST00000528494 RIMBP3BA6NNM3 1639 aa18.48■□□□□ 0.55
ATG13-211ENST00000528494 RIMBP3Q9UFD9 1639 aa18.48■□□□□ 0.55
ATG13-211ENST00000528494 RSPH4AQ5TD94 716 aa18.47■□□□□ 0.55
ATG13-211ENST00000528494 CCDC141Q6ZP82 1450 aa18.46■□□□□ 0.55
ATG13-211ENST00000528494 FOXD1Q16676 465 aa18.46■□□□□ 0.55
ATG13-211ENST00000528494 MPHOSPH9Q99550 1183 aa18.46■□□□□ 0.55
ATG13-211ENST00000528494 ARHGEF12Q9NZN5 1544 aa18.46■□□□□ 0.55
ATG13-211ENST00000528494 CROCC2H7BZ55 1655 aa18.45■□□□□ 0.54
ATG13-211ENST00000528494 ADGRL2O95490 1459 aa18.45■□□□□ 0.54
ATG13-211ENST00000528494 AFAP1Q8N556 730 aa18.44■□□□□ 0.54
ATG13-211ENST00000528494 ARHGEF5Q12774 1597 aa18.43■□□□□ 0.54
ATG13-211ENST00000528494 ANKRD50Q9ULJ7 1429 aa18.43■□□□□ 0.54
ATG13-211ENST00000528494 KIAA1107Q9UPP5 1409 aa18.43■□□□□ 0.54
ATG13-211ENST00000528494 KIF15Q9NS87 1388 aa18.43■□□□□ 0.54
ATG13-211ENST00000528494 SHANK2Q9UPX8 1470 aa18.43■□□□□ 0.54
ATG13-211ENST00000528494 SLC4A1APQ9BWU0 796 aaKnown RBP18.42■□□□□ 0.54
ATG13-211ENST00000528494 FANCAO15360 1455 aa18.41■□□□□ 0.54
ATG13-211ENST00000528494 PLEKHH2Q8IVE3 1493 aa18.41■□□□□ 0.54
ATG13-211ENST00000528494 ADGBQ8N7X0 1667 aa18.41■□□□□ 0.54
ATG13-211ENST00000528494 TRAPPC8Q9Y2L5 1435 aa18.41■□□□□ 0.54
ATG13-211ENST00000528494 ABCA9Q8IUA7 1624 aa18.4■□□□□ 0.54
ATG13-211ENST00000528494 MYT1LQ9UL68 1186 aa18.38■□□□□ 0.53
ATG13-211ENST00000528494 DENND4BO75064 1496 aaPredicted RBP18.38■□□□□ 0.53
ATG13-211ENST00000528494 CD109Q6YHK3 1445 aa18.38■□□□□ 0.53
ATG13-211ENST00000528494 ABCC1P33527 1531 aa18.37■□□□□ 0.53
ATG13-211ENST00000528494 SPAG9O60271 1321 aaKnown RBP18.35■□□□□ 0.53
ATG13-211ENST00000528494 SCAPERQ9BY12 1400 aa18.35■□□□□ 0.53
ATG13-211ENST00000528494 NUP155O75694 1391 aa18.34■□□□□ 0.53
ATG13-211ENST00000528494 ARAP3Q8WWN8 1544 aa18.34■□□□□ 0.53
ATG13-211ENST00000528494 ADGRL1O94910 1474 aa18.33■□□□□ 0.53
ATG13-211ENST00000528494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.33■□□□□ 0.53
ATG13-211ENST00000528494 FAM69CQ0P6D2 419 aa18.31■□□□□ 0.52
ATG13-211ENST00000528494 PKD2Q13563 968 aa18.31■□□□□ 0.52
ATG13-211ENST00000528494 TONSLQ96HA7 1378 aa18.3■□□□□ 0.52
ATG13-211ENST00000528494 ZNF316A6NFI3 1004 aaPredicted RBP18.3■□□□□ 0.52
ATG13-211ENST00000528494 PZPP20742 1482 aa18.3■□□□□ 0.52
ATG13-211ENST00000528494 ANP32EQ9BTT0 268 aa18.3■□□□□ 0.52
ATG13-211ENST00000528494 MAST1Q9Y2H9 1570 aa18.28■□□□□ 0.52
ATG13-211ENST00000528494 TIMELESSQ9UNS1 1208 aa18.26■□□□□ 0.51
ATG13-211ENST00000528494 ANKRD30BQ9BXX2 1392 aa18.25■□□□□ 0.51
ATG13-211ENST00000528494 PPP1R15AO75807 674 aaPredicted RBP18.25■□□□□ 0.51
ATG13-211ENST00000528494 RAPGEF3O95398 923 aa18.25■□□□□ 0.51
ATG13-211ENST00000528494 PLXNC1O60486 1568 aa18.22■□□□□ 0.51
ATG13-211ENST00000528494 RTEL1-TNFRSF6BF6WH68 1400 aa18.21■□□□□ 0.51
ATG13-211ENST00000528494 DUOX2Q9NRD8 1548 aa18.21■□□□□ 0.51
ATG13-211ENST00000528494 ZFYVE16Q7Z3T8 1539 aa18.21■□□□□ 0.51
ATG13-211ENST00000528494 ATP7AQ04656 1500 aa18.19■□□□□ 0.5
ATG13-211ENST00000528494 L3MBTL2Q969R5 705 aa18.18■□□□□ 0.5
ATG13-211ENST00000528494 ZNF518AQ6AHZ1 1483 aa18.18■□□□□ 0.5
ATG13-211ENST00000528494 KIF3BO15066 747 aa18.18■□□□□ 0.5
ATG13-211ENST00000528494 YTHDC1Q96MU7 727 aaKnown RBP18.18■□□□□ 0.5
ATG13-211ENST00000528494 ERBINQ96RT1 1412 aa18.18■□□□□ 0.5
ATG13-211ENST00000528494 PRKCSHP14314 528 aaPredicted RBP18.16■□□□□ 0.5
ATG13-211ENST00000528494 POGZQ7Z3K3 1410 aa18.16■□□□□ 0.5
ATG13-211ENST00000528494 FAM135AQ9P2D6 1515 aa18.16■□□□□ 0.5
ATG13-211ENST00000528494 NEO1Q92859 1461 aa18.15■□□□□ 0.5
ATG13-211ENST00000528494 MAP3K4Q9Y6R4 1608 aa18.14■□□□□ 0.49
ATG13-211ENST00000528494 CFAP74Q9C0B2 1584 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms