RNA–Protein interactions for RNA: ENST00000528256.1

PICALM-208, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 4

Gene PICALM, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-208ENST00000528256 TMEM92Q6UXU6 159 aa13.53□□□□□ -0.24
PICALM-208ENST00000528256 PAXIP1Q6ZW49 1069 aaPredicted RBP13.51□□□□□ -0.25
PICALM-208ENST00000528256 CFAP44Q96MT7 982 aa13.5□□□□□ -0.25
PICALM-208ENST00000528256 FAM163AQ96GL9 167 aaPredicted RBP13.48□□□□□ -0.25
PICALM-208ENST00000528256 NISCHQ9Y2I1 1504 aa13.47□□□□□ -0.25
PICALM-208ENST00000528256 C2orf72A6NCS6 295 aa13.44□□□□□ -0.26
PICALM-208ENST00000528256 TMC2Q8TDI7 906 aa13.44□□□□□ -0.26
PICALM-208ENST00000528256 KIF3CO14782 793 aa13.43□□□□□ -0.26
PICALM-208ENST00000528256 SNPHO15079 494 aa13.43□□□□□ -0.26
PICALM-208ENST00000528256 GPHNQ9NQX3 736 aaPredicted RBP13.37□□□□□ -0.27
PICALM-208ENST00000528256 CADPS2Q86UW7 1296 aa13.36□□□□□ -0.27
PICALM-208ENST00000528256 CRISPLD2Q9H0B8 497 aa13.35□□□□□ -0.27
PICALM-208ENST00000528256 HOXB3P14651 431 aaPredicted RBP13.34□□□□□ -0.27
PICALM-208ENST00000528256 LCE2DQ5TA82 110 aaPredicted RBP13.34□□□□□ -0.27
PICALM-208ENST00000528256 NCKAP5LQ9HCH0 1330 aa13.34□□□□□ -0.27
PICALM-208ENST00000528256 PDE4AP27815 886 aa13.33□□□□□ -0.28
PICALM-208ENST00000528256 DOK7Q18PE1 504 aa13.33□□□□□ -0.28
PICALM-208ENST00000528256 ST18O60284 1047 aa13.31□□□□□ -0.28
PICALM-208ENST00000528256 FOXK1P85037 733 aa13.31□□□□□ -0.28
PICALM-208ENST00000528256 PLCB2Q00722 1185 aa13.3□□□□□ -0.28
PICALM-208ENST00000528256 DSG2Q14126 1118 aa13.3□□□□□ -0.28
PICALM-208ENST00000528256 PLPP6Q8IY26 295 aa13.28□□□□□ -0.28
PICALM-208ENST00000528256 ZNF710Q8N1W2 664 aa13.28□□□□□ -0.28
PICALM-208ENST00000528256 LARP6Q9BRS8 491 aaKnown RBP13.28□□□□□ -0.28
PICALM-208ENST00000528256 RIMBP2O15034 1052 aa13.27□□□□□ -0.29
PICALM-208ENST00000528256 PPP1R15BQ5SWA1 713 aa13.25□□□□□ -0.29
PICALM-208ENST00000528256 DDX27Q96GQ7 796 aaKnown RBP13.24□□□□□ -0.29
PICALM-208ENST00000528256 MFSD10Q14728 455 aa13.23□□□□□ -0.29
PICALM-208ENST00000528256 TSHZ2Q9NRE2 1034 aa13.23□□□□□ -0.29
PICALM-208ENST00000528256 ZSWIM6Q9HCJ5 1215 aa13.22□□□□□ -0.29
PICALM-208ENST00000528256 SLC34A2O95436 690 aa13.21□□□□□ -0.29
PICALM-208ENST00000528256 CDAN1Q8IWY9 1227 aa13.21□□□□□ -0.29
PICALM-208ENST00000528256 HOXB1P14653 301 aaPredicted RBP13.19□□□□□ -0.3
PICALM-208ENST00000528256 GPR153Q6NV75 609 aa13.17□□□□□ -0.3
PICALM-208ENST00000528256 ARSIQ5FYB1 569 aa13.16□□□□□ -0.3
PICALM-208ENST00000528256 MARVELD3Q96A59 401 aa13.16□□□□□ -0.3
PICALM-208ENST00000528256 PTCD2Q8WV60 388 aaKnown RBP13.14□□□□□ -0.31
PICALM-208ENST00000528256 PCDHGA4Q9Y5G9 962 aa13.14□□□□□ -0.31
PICALM-208ENST00000528256 EMP3P54852 163 aa13.12□□□□□ -0.31
PICALM-208ENST00000528256 KHSRPQ92945 711 aaKnown RBP eCLIP13.12□□□□□ -0.311e-7■■■□□ 18.7
PICALM-208ENST00000528256 HAP1P54257 671 aaPredicted RBP13.1□□□□□ -0.31
PICALM-208ENST00000528256 OXER1Q8TDS5 423 aa13.1□□□□□ -0.31
PICALM-208ENST00000528256 UPF1Q92900 1129 aaKnown RBP eCLIP13.1□□□□□ -0.31
PICALM-208ENST00000528256 WDR70Q9NW82 654 aa13.1□□□□□ -0.31
PICALM-208ENST00000528256 TBC1D12O60347 775 aa13.09□□□□□ -0.31
PICALM-208ENST00000528256 NUDT7P0C024 238 aa13.07□□□□□ -0.32
PICALM-208ENST00000528256 CAMK2BQ13554 666 aa13.06□□□□□ -0.32
PICALM-208ENST00000528256 EMILIN3Q9NT22 766 aa13.06□□□□□ -0.32
PICALM-208ENST00000528256 FAM205CA6NFA0 338 aa13.05□□□□□ -0.32
PICALM-208ENST00000528256 ERBB3P21860 1342 aa13.04□□□□□ -0.32
PICALM-208ENST00000528256 KDM4FA0A1W2PPD8 638 aa13.01□□□□□ -0.33
PICALM-208ENST00000528256 E2F4Q16254 413 aa13.01□□□□□ -0.33
PICALM-208ENST00000528256 HS3ST6Q96QI5 342 aa13.01□□□□□ -0.33
PICALM-208ENST00000528256 ZNF316A6NFI3 1004 aaPredicted RBP13□□□□□ -0.33
PICALM-208ENST00000528256 MAP3K9P80192 1104 aa13□□□□□ -0.33
PICALM-208ENST00000528256 POTEB3A0JP26 581 aa12.99□□□□□ -0.33
PICALM-208ENST00000528256 POTEBQ6S5H4 581 aa12.99□□□□□ -0.33
PICALM-208ENST00000528256 VARS2Q5ST30 1063 aaKnown RBP12.98□□□□□ -0.33
PICALM-208ENST00000528256 LHX6Q9UPM6 363 aa12.98□□□□□ -0.33
PICALM-208ENST00000528256 DPYSL4O14531 572 aa12.95□□□□□ -0.34
PICALM-208ENST00000528256 EVI5O60447 810 aa12.95□□□□□ -0.34
PICALM-208ENST00000528256 MMRN1Q13201 1228 aa12.91□□□□□ -0.34
PICALM-208ENST00000528256 ANO8Q9HCE9 1232 aaPredicted RBP12.91□□□□□ -0.34
PICALM-208ENST00000528256 PSDA5PKW4 1024 aaPredicted RBP12.89□□□□□ -0.35
PICALM-208ENST00000528256 KDM2AQ9Y2K7 1162 aa12.89□□□□□ -0.35
PICALM-208ENST00000528256 ARIH1Q9Y4X5 557 aaPredicted RBP12.89□□□□□ -0.35
PICALM-208ENST00000528256 VSIG10Q8N0Z9 540 aa12.88□□□□□ -0.35
PICALM-208ENST00000528256 ZNF687Q8N1G0 1237 aa12.88□□□□□ -0.35
PICALM-208ENST00000528256 SPNS2Q8IVW8 549 aa12.87□□□□□ -0.35
PICALM-208ENST00000528256 KCNV2Q8TDN2 545 aa12.86□□□□□ -0.35
PICALM-208ENST00000528256 PPP4R3BQ5MIZ7 849 aa12.84□□□□□ -0.35
PICALM-208ENST00000528256 SPDYE16A6NNV3 312 aaPredicted RBP12.83□□□□□ -0.36
PICALM-208ENST00000528256 PDIA6Q15084 440 aa12.83□□□□□ -0.36
PICALM-208ENST00000528256 P3H3Q8IVL6 736 aa12.83□□□□□ -0.36
PICALM-208ENST00000528256 ZNF454Q8N9F8 522 aa12.83□□□□□ -0.36
PICALM-208ENST00000528256 ARHGEF1Q92888 912 aaKnown RBP12.83□□□□□ -0.36
PICALM-208ENST00000528256 FOSBP53539 338 aa12.81□□□□□ -0.36
PICALM-208ENST00000528256 JPH4Q96JJ6 628 aa12.81□□□□□ -0.36
PICALM-208ENST00000528256 KRTAP3-3Q9BYR6 98 aa12.79□□□□□ -0.36
PICALM-208ENST00000528256 KRTAP3-2Q9BYR7 98 aa12.79□□□□□ -0.36
PICALM-208ENST00000528256 PTGER2P43116 358 aa12.77□□□□□ -0.37
PICALM-208ENST00000528256 PHF14O94880 888 aa12.76□□□□□ -0.37
PICALM-208ENST00000528256 PBX2P40425 430 aa12.76□□□□□ -0.37
PICALM-208ENST00000528256 DDX12PQ92771 950 aa12.76□□□□□ -0.37
PICALM-208ENST00000528256 PCDHGA10Q9Y5H3 936 aa12.76□□□□□ -0.37
PICALM-208ENST00000528256 POTEEQ6S8J3 1075 aa12.75□□□□□ -0.37
PICALM-208ENST00000528256 ZDHHC16Q969W1 377 aa12.75□□□□□ -0.37
PICALM-208ENST00000528256 AXIN2Q9Y2T1 843 aa12.74□□□□□ -0.37
PICALM-208ENST00000528256 ARHGAP33O14559 1287 aa12.72□□□□□ -0.37
PICALM-208ENST00000528256 TYW1BQ6NUM6 668 aa12.72□□□□□ -0.37
PICALM-208ENST00000528256 FBXW7Q969H0 707 aa12.71□□□□□ -0.37
PICALM-208ENST00000528256 EPAS1Q99814 870 aa12.71□□□□□ -0.37
PICALM-208ENST00000528256 ADAM33Q9BZ11 813 aa12.71□□□□□ -0.37
PICALM-208ENST00000528256 BCL2L12Q9HB09 334 aa12.71□□□□□ -0.37
PICALM-208ENST00000528256 GRXCR2A6NFK2 248 aa12.69□□□□□ -0.38
PICALM-208ENST00000528256 KCNK17Q96T54 332 aa12.69□□□□□ -0.38
PICALM-208ENST00000528256 PSEN2P49810 448 aa12.68□□□□□ -0.38
PICALM-208ENST00000528256 LSM11P83369 360 aaKnown RBP eCLIP12.68□□□□□ -0.38
PICALM-208ENST00000528256 NBR1Q14596 966 aa12.68□□□□□ -0.38
PICALM-208ENST00000528256 KCNH8Q96L42 1107 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms