RNA–Protein interactions for RNA: ENST00000528099.5

C11orf54-206, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C11orf54, Length 1,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-206ENST00000528099 DISP3Q9P2K9 1392 aa11.83□□□□□ -0.52
C11orf54-206ENST00000528099 POLA1P09884 1462 aaPredicted RBP11.83□□□□□ -0.52
C11orf54-206ENST00000528099 PELP1Q8IZL8 1130 aaKnown RBP11.83□□□□□ -0.52
C11orf54-206ENST00000528099 TDRD9Q8NDG6 1382 aaKnown RBP11.82□□□□□ -0.52
C11orf54-206ENST00000528099 IFNL1Q8IU54 200 aa11.82□□□□□ -0.52
C11orf54-206ENST00000528099 BMP2KQ9NSY1 1161 aaPredicted RBP11.8□□□□□ -0.52
C11orf54-206ENST00000528099 DIP2BQ9P265 1576 aa11.8□□□□□ -0.52
C11orf54-206ENST00000528099 ATN1P54259 1190 aaPredicted RBP11.8□□□□□ -0.52
C11orf54-206ENST00000528099 TIE1P35590 1138 aa11.79□□□□□ -0.52
C11orf54-206ENST00000528099 RAD54L2Q9Y4B4 1467 aa11.78□□□□□ -0.52
C11orf54-206ENST00000528099 SLC39A7Q92504 469 aa11.77□□□□□ -0.53
C11orf54-206ENST00000528099 METRNQ9UJH8 293 aa11.76□□□□□ -0.53
C11orf54-206ENST00000528099 GRIN2BQ13224 1484 aa11.76□□□□□ -0.53
C11orf54-206ENST00000528099 MAPKBP1O60336 1514 aa11.76□□□□□ -0.53
C11orf54-206ENST00000528099 TTLL13PA6NNM8 815 aa11.75□□□□□ -0.53
C11orf54-206ENST00000528099 C7P10643 843 aa11.75□□□□□ -0.53
C11orf54-206ENST00000528099 SOGA1O94964 1423 aa11.75□□□□□ -0.53
C11orf54-206ENST00000528099 CEP170Q5SW79 1584 aa11.75□□□□□ -0.53
C11orf54-206ENST00000528099 PCDHB8Q9UN66 801 aa11.74□□□□□ -0.53
C11orf54-206ENST00000528099 TMEM106CQ9BVX2 250 aa11.73□□□□□ -0.53
C11orf54-206ENST00000528099 TOP2AP11388 1531 aaKnown RBP11.73□□□□□ -0.53
C11orf54-206ENST00000528099 TSPOAP1O95153 1857 aa11.73□□□□□ -0.53
C11orf54-206ENST00000528099 TRIM35Q9UPQ4 493 aa11.7□□□□□ -0.54
C11orf54-206ENST00000528099 SHROOM2Q13796 1616 aa11.7□□□□□ -0.54
C11orf54-206ENST00000528099 ZNF467Q7Z7K2 595 aaPredicted RBP11.69□□□□□ -0.54
C11orf54-206ENST00000528099 SEC24BO95487 1268 aa11.68□□□□□ -0.54
C11orf54-206ENST00000528099 CHRM1P11229 460 aaPredicted RBP11.68□□□□□ -0.54
C11orf54-206ENST00000528099 POTEB2H3BUK9 544 aa11.66□□□□□ -0.54
C11orf54-206ENST00000528099 SPATA31D1Q6ZQQ2 1576 aa11.65□□□□□ -0.54
C11orf54-206ENST00000528099 PBRM1Q86U86 1689 aa11.65□□□□□ -0.55
C11orf54-206ENST00000528099 TOP2BQ02880 1626 aa11.64□□□□□ -0.55
C11orf54-206ENST00000528099 NUP160Q12769 1436 aa11.63□□□□□ -0.55
C11orf54-206ENST00000528099 GRIN2AQ12879 1464 aa11.61□□□□□ -0.55
C11orf54-206ENST00000528099 FGD5Q6ZNL6 1462 aa11.6□□□□□ -0.55
C11orf54-206ENST00000528099 GOLGA2Q08379 1002 aa11.6□□□□□ -0.55
C11orf54-206ENST00000528099 CCDC88BA6NC98 1476 aa11.6□□□□□ -0.55
C11orf54-206ENST00000528099 PSEN1P49768 467 aa11.59□□□□□ -0.55
C11orf54-206ENST00000528099 IER5LQ5T953 404 aa11.59□□□□□ -0.55
C11orf54-206ENST00000528099 PPRC1Q5VV67 1664 aaKnown RBP11.58□□□□□ -0.56
C11orf54-206ENST00000528099 ADCY10Q96PN6 1610 aa11.57□□□□□ -0.56
C11orf54-206ENST00000528099 COL17A1Q9UMD9 1497 aaPredicted RBP11.57□□□□□ -0.56
C11orf54-206ENST00000528099 OTUD5Q96G74 571 aa11.57□□□□□ -0.56
C11orf54-206ENST00000528099 COLQQ9Y215 455 aaPredicted RBP11.57□□□□□ -0.56
C11orf54-206ENST00000528099 CERKQ8TCT0 537 aa11.56□□□□□ -0.56
C11orf54-206ENST00000528099 PRG4Q92954 1404 aaPredicted RBP11.55□□□□□ -0.56
C11orf54-206ENST00000528099 POTEFA5A3E0 1075 aa11.55□□□□□ -0.56
C11orf54-206ENST00000528099 PLCG2P16885 1265 aa11.55□□□□□ -0.56
C11orf54-206ENST00000528099 PDAP1Q13442 181 aaKnown RBP11.55□□□□□ -0.56
C11orf54-206ENST00000528099 MKRN3Q13064 507 aaKnown RBP11.53□□□□□ -0.56
C11orf54-206ENST00000528099 MAMSTRQ6ZN01 415 aa11.53□□□□□ -0.56
C11orf54-206ENST00000528099 SCUBE2Q9NQ36 999 aa11.52□□□□□ -0.57
C11orf54-206ENST00000528099 ABCA5Q8WWZ7 1642 aa11.51□□□□□ -0.57
C11orf54-206ENST00000528099 POTEJP0CG39 1038 aa11.51□□□□□ -0.57
C11orf54-206ENST00000528099 GLI2P10070 1586 aa11.51□□□□□ -0.57
C11orf54-206ENST00000528099 OCEL1Q9H607 264 aa11.49□□□□□ -0.57
C11orf54-206ENST00000528099 ADAMTS12P58397 1594 aa11.48□□□□□ -0.57
C11orf54-206ENST00000528099 JPH4Q96JJ6 628 aa11.48□□□□□ -0.57
C11orf54-206ENST00000528099 PCF11O94913 1555 aaKnown RBP11.48□□□□□ -0.57
C11orf54-206ENST00000528099 IRX5P78411 483 aaPredicted RBP11.47□□□□□ -0.57
C11orf54-206ENST00000528099 CABP2Q9NPB3 220 aa11.47□□□□□ -0.57
C11orf54-206ENST00000528099 RIOK3O14730 519 aaKnown RBP11.45□□□□□ -0.58
C11orf54-206ENST00000528099 CUX1P39880 1505 aa11.45□□□□□ -0.58
C11orf54-206ENST00000528099 ABCA10Q8WWZ4 1543 aa11.44□□□□□ -0.58
C11orf54-206ENST00000528099 PTPRMP28827 1452 aa11.44□□□□□ -0.58
C11orf54-206ENST00000528099 ECM2O94769 699 aaPredicted RBP11.44□□□□□ -0.58
C11orf54-206ENST00000528099 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.43□□□□□ -0.588e-7■■■□□ 14.9
C11orf54-206ENST00000528099 TEX14Q8IWB6 1497 aa11.42□□□□□ -0.58
C11orf54-206ENST00000528099 FHAD1B1AJZ9 1412 aa11.41□□□□□ -0.58
C11orf54-206ENST00000528099 RNF25Q96BH1 459 aaPredicted RBP11.4□□□□□ -0.58
C11orf54-206ENST00000528099 PLB1Q6P1J6 1458 aa11.4□□□□□ -0.58
C11orf54-206ENST00000528099 MAP3K4Q9Y6R4 1608 aa11.4□□□□□ -0.59
C11orf54-206ENST00000528099 VGFO15240 615 aaPredicted RBP11.38□□□□□ -0.59
C11orf54-206ENST00000528099 ADAMTSL3P82987 1691 aa11.38□□□□□ -0.59
C11orf54-206ENST00000528099 ASXL2Q76L83 1435 aa11.38□□□□□ -0.59
C11orf54-206ENST00000528099 KIF21BO75037 1637 aa11.38□□□□□ -0.59
C11orf54-206ENST00000528099 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.37□□□□□ -0.59
C11orf54-206ENST00000528099 ZFP91Q96JP5 570 aaPredicted RBP11.37□□□□□ -0.59
C11orf54-206ENST00000528099 TAOK2Q9UL54 1235 aa11.37□□□□□ -0.59
C11orf54-206ENST00000528099 RUSC2Q8N2Y8 1516 aa11.35□□□□□ -0.59
C11orf54-206ENST00000528099 PKD2Q13563 968 aa11.34□□□□□ -0.59
C11orf54-206ENST00000528099 EFCAB3Q8N7B9 438 aa11.34□□□□□ -0.59
C11orf54-206ENST00000528099 PDCD7Q8N8D1 485 aaKnown RBP11.34□□□□□ -0.59
C11orf54-206ENST00000528099 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
C11orf54-206ENST00000528099 ABCC2Q92887 1545 aa11.34□□□□□ -0.59
C11orf54-206ENST00000528099 KIAA0586Q9BVV6 1533 aa11.33□□□□□ -0.6
C11orf54-206ENST00000528099 L3MBTL3Q96JM7 780 aaPredicted RBP11.33□□□□□ -0.6
C11orf54-206ENST00000528099 EPRSP07814 1512 aaKnown RBP11.32□□□□□ -0.6
C11orf54-206ENST00000528099 G3V3G9 751 aa11.32□□□□□ -0.6
C11orf54-206ENST00000528099 HSPA2P54652 639 aa11.31□□□□□ -0.6
C11orf54-206ENST00000528099 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.31□□□□□ -0.6
C11orf54-206ENST00000528099 FAM163AQ96GL9 167 aaPredicted RBP11.3□□□□□ -0.6
C11orf54-206ENST00000528099 C3orf67Q6ZVT6 689 aa11.29□□□□□ -0.6
C11orf54-206ENST00000528099 DPY19L2Q6NUT2 758 aa11.29□□□□□ -0.6
C11orf54-206ENST00000528099 RGL2O15211 777 aa11.28□□□□□ -0.6
C11orf54-206ENST00000528099 BCL11BQ9C0K0 894 aaPredicted RBP11.28□□□□□ -0.6
C11orf54-206ENST00000528099 STK24Q9Y6E0 443 aa11.28□□□□□ -0.6
C11orf54-206ENST00000528099 ERICH3Q5RHP9 1530 aa11.28□□□□□ -0.6
C11orf54-206ENST00000528099 STK25O00506 426 aa11.27□□□□□ -0.6
C11orf54-206ENST00000528099 CUL7Q14999 1698 aa11.27□□□□□ -0.6
C11orf54-206ENST00000528099 MADDQ8WXG6 1647 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms