RNA–Protein interactions for RNA: ENST00000527013.5

CHEK1-209, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-209ENST00000527013 CDK11AQ9UQ88 783 aaPredicted RBP26.67■■□□□ 1.86
CHEK1-209ENST00000527013 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
CHEK1-209ENST00000527013 MYO5CQ9NQX4 1742 aa26.65■■□□□ 1.86
CHEK1-209ENST00000527013 EFCAB2Q5VUJ9 269 aa26.63■■□□□ 1.85
CHEK1-209ENST00000527013 ATP1B4Q9UN42 357 aaPredicted RBP26.62■■□□□ 1.85
CHEK1-209ENST00000527013 EHMT2Q96KQ7 1210 aa26.61■■□□□ 1.85
CHEK1-209ENST00000527013 TROQ12816 1431 aaPredicted RBP26.6■■□□□ 1.85
CHEK1-209ENST00000527013 KIF14Q15058 1648 aa26.59■■□□□ 1.85
CHEK1-209ENST00000527013 ATP10AO60312 1499 aa26.58■■□□□ 1.85
CHEK1-209ENST00000527013 FBXO41Q8TF61 875 aa26.58■■□□□ 1.85
CHEK1-209ENST00000527013 LRRIQ1Q96JM4 1722 aa26.55■■□□□ 1.84
CHEK1-209ENST00000527013 CLIP1P30622 1438 aa26.55■■□□□ 1.84
CHEK1-209ENST00000527013 C9orf84Q5VXU9 1444 aa26.55■■□□□ 1.84
CHEK1-209ENST00000527013 ZNF518AQ6AHZ1 1483 aa26.55■■□□□ 1.84
CHEK1-209ENST00000527013 FER1L4A9Z1Z3 1794 aa26.53■■□□□ 1.84
CHEK1-209ENST00000527013 ARHGEF12Q9NZN5 1544 aa26.53■■□□□ 1.84
CHEK1-209ENST00000527013 KDM5CP41229 1560 aa26.52■■□□□ 1.84
CHEK1-209ENST00000527013 ARHGAP5Q13017 1502 aa26.5■■□□□ 1.83
CHEK1-209ENST00000527013 MLECQ14165 292 aa26.49■■□□□ 1.83
CHEK1-209ENST00000527013 CDC42BPBQ9Y5S2 1711 aa26.46■■□□□ 1.83
CHEK1-209ENST00000527013 HSPA2P54652 639 aa26.46■■□□□ 1.83
CHEK1-209ENST00000527013 CASKIN1Q8WXD9 1431 aa26.46■■□□□ 1.83
CHEK1-209ENST00000527013 CCDC18Q5T9S5 1454 aa26.45■■□□□ 1.82
CHEK1-209ENST00000527013 AFAP1Q8N556 730 aa26.45■■□□□ 1.82
CHEK1-209ENST00000527013 REREQ9P2R6 1566 aa26.43■■□□□ 1.82
CHEK1-209ENST00000527013 PLPPR3Q6T4P5 718 aa26.42■■□□□ 1.82
CHEK1-209ENST00000527013 MLH3Q9UHC1 1453 aa26.42■■□□□ 1.82
CHEK1-209ENST00000527013 PREX2Q70Z35 1606 aa26.41■■□□□ 1.82
CHEK1-209ENST00000527013 DIP2CQ9Y2E4 1556 aa26.41■■□□□ 1.82
CHEK1-209ENST00000527013 ABCC1P33527 1531 aa26.38■■□□□ 1.81
CHEK1-209ENST00000527013 PREX1Q8TCU6 1659 aa26.37■■□□□ 1.81
CHEK1-209ENST00000527013 ABCA6Q8N139 1617 aa26.35■■□□□ 1.81
CHEK1-209ENST00000527013 FYCO1Q9BQS8 1478 aa26.35■■□□□ 1.81
CHEK1-209ENST00000527013 TRAPPC8Q9Y2L5 1435 aa26.34■■□□□ 1.81
CHEK1-209ENST00000527013 AGLP35573 1532 aa26.34■■□□□ 1.81
CHEK1-209ENST00000527013 CEBPAP49715 358 aaPredicted RBP26.33■■□□□ 1.81
CHEK1-209ENST00000527013 ITSN2Q9NZM3 1697 aa26.33■■□□□ 1.81
CHEK1-209ENST00000527013 CDC42BPAQ5VT25 1732 aa26.31■■□□□ 1.8
CHEK1-209ENST00000527013 MYT1LQ9UL68 1186 aa26.31■■□□□ 1.8
CHEK1-209ENST00000527013 SETD1BQ9UPS6 1966 aaKnown RBP26.29■■□□□ 1.8
CHEK1-209ENST00000527013 KIDINS220Q9ULH0 1771 aa26.28■■□□□ 1.8
CHEK1-209ENST00000527013 CERKQ8TCT0 537 aa26.25■■□□□ 1.79
CHEK1-209ENST00000527013 UHRF1BP1Q6BDS2 1440 aa26.24■■□□□ 1.79
CHEK1-209ENST00000527013 C3P01024 1663 aa26.22■■□□□ 1.79
CHEK1-209ENST00000527013 GPATCH8Q9UKJ3 1502 aaKnown RBP26.22■■□□□ 1.79
CHEK1-209ENST00000527013 STRCQ7RTU9 1775 aa26.22■■□□□ 1.79
CHEK1-209ENST00000527013 SAMD9LQ8IVG5 1584 aa26.21■■□□□ 1.79
CHEK1-209ENST00000527013 DMRT2Q9Y5R5 561 aa26.2■■□□□ 1.78
CHEK1-209ENST00000527013 CNTLNQ9NXG0 1405 aa26.18■■□□□ 1.78
CHEK1-209ENST00000527013 KIAA1107Q9UPP5 1409 aa26.16■■□□□ 1.78
CHEK1-209ENST00000527013 SYCP2Q9BX26 1530 aa26.16■■□□□ 1.78
CHEK1-209ENST00000527013 ESF1Q9H501 851 aaKnown RBP26.16■■□□□ 1.78
CHEK1-209ENST00000527013 ZNF777Q9ULD5 760 aaPredicted RBP26.14■■□□□ 1.78
CHEK1-209ENST00000527013 PLEKHH2Q8IVE3 1493 aa26.13■■□□□ 1.77
CHEK1-209ENST00000527013 SPAG9O60271 1321 aaKnown RBP26.13■■□□□ 1.77
CHEK1-209ENST00000527013 HNRNPMP52272 730 aaKnown RBP eCLIP26.11■■□□□ 1.77
CHEK1-209ENST00000527013 MROH2AA6NES4 1674 aa26.11■■□□□ 1.77
CHEK1-209ENST00000527013 CFDP1Q9UEE9 299 aaPredicted RBP26.1■■□□□ 1.77
CHEK1-209ENST00000527013 PTPRTO14522 1441 aa26.1■■□□□ 1.77
CHEK1-209ENST00000527013 ATP7AQ04656 1500 aa26.09■■□□□ 1.77
CHEK1-209ENST00000527013 CCNB3Q8WWL7 1395 aa26.08■■□□□ 1.77
CHEK1-209ENST00000527013 INO80Q9ULG1 1556 aaPredicted RBP26.08■■□□□ 1.77
CHEK1-209ENST00000527013 NPATQ14207 1427 aa26.08■■□□□ 1.77
CHEK1-209ENST00000527013 PLXNC1O60486 1568 aa26.07■■□□□ 1.76
CHEK1-209ENST00000527013 MTUS2Q5JR59 1369 aa26.07■■□□□ 1.76
CHEK1-209ENST00000527013 SUPT6HQ7KZ85 1726 aaKnown RBP26.04■■□□□ 1.76
CHEK1-209ENST00000527013 ZMYM3Q14202 1370 aa26.04■■□□□ 1.76
CHEK1-209ENST00000527013 A2MP01023 1474 aa26.03■■□□□ 1.76
CHEK1-209ENST00000527013 NCOA1Q15788 1441 aa26.02■■□□□ 1.76
CHEK1-209ENST00000527013 TIAM1Q13009 1591 aa25.99■■□□□ 1.75
CHEK1-209ENST00000527013 EHBP1L1Q8N3D4 1523 aa25.99■■□□□ 1.75
CHEK1-209ENST00000527013 MBD5Q9P267 1494 aa25.98■■□□□ 1.75
CHEK1-209ENST00000527013 CEP162Q5TB80 1403 aa25.97■■□□□ 1.75
CHEK1-209ENST00000527013 ADGBQ8N7X0 1667 aa25.96■■□□□ 1.75
CHEK1-209ENST00000527013 PPP6R1Q9UPN7 881 aa25.96■■□□□ 1.75
CHEK1-209ENST00000527013 CLTCQ00610 1675 aaKnown RBP25.96■■□□□ 1.75
CHEK1-209ENST00000527013 LTBP4Q8N2S1 1624 aa25.96■■□□□ 1.75
CHEK1-209ENST00000527013 ZNF644Q9H582 1327 aaPredicted RBP25.94■■□□□ 1.74
CHEK1-209ENST00000527013 CAMSAP1Q5T5Y3 1602 aa25.94■■□□□ 1.74
CHEK1-209ENST00000527013 RTEL1-TNFRSF6BF6WH68 1400 aa25.94■■□□□ 1.74
CHEK1-209ENST00000527013 PTPRKQ15262 1439 aa25.92■■□□□ 1.74
CHEK1-209ENST00000527013 IQSEC2Q5JU85 1478 aa25.91■■□□□ 1.74
CHEK1-209ENST00000527013 ZNF142P52746 1687 aaPredicted RBP25.91■■□□□ 1.74
CHEK1-209ENST00000527013 GGT6Q6P531 493 aa25.9■■□□□ 1.74
CHEK1-209ENST00000527013 MYO3AQ8NEV4 1616 aa25.89■■□□□ 1.74
CHEK1-209ENST00000527013 PLA2R1Q13018 1463 aa25.88■■□□□ 1.73
CHEK1-209ENST00000527013 DHX29Q7Z478 1369 aaKnown RBP25.86■■□□□ 1.73
CHEK1-209ENST00000527013 CEP170BQ9Y4F5 1589 aaPredicted RBP25.86■■□□□ 1.73
CHEK1-209ENST00000527013 PKD2Q13563 968 aa25.83■■□□□ 1.73
CHEK1-209ENST00000527013 TCOF1Q13428 1488 aaKnown RBP25.83■■□□□ 1.73
CHEK1-209ENST00000527013 RSPH4AQ5TD94 716 aa25.82■■□□□ 1.72
CHEK1-209ENST00000527013 NCOA2Q15596 1464 aa25.82■■□□□ 1.72
CHEK1-209ENST00000527013 NCKAP5LQ9HCH0 1330 aa25.82■■□□□ 1.72
CHEK1-209ENST00000527013 CCDC141Q6ZP82 1450 aa25.81■■□□□ 1.72
CHEK1-209ENST00000527013 FAM135AQ9P2D6 1515 aa25.79■■□□□ 1.72
CHEK1-209ENST00000527013 CAMSAP2Q08AD1 1489 aa25.79■■□□□ 1.72
CHEK1-209ENST00000527013 A2ML1A8K2U0 1454 aa25.77■■□□□ 1.72
CHEK1-209ENST00000527013 ARHGEF5Q12774 1597 aa25.74■■□□□ 1.71
CHEK1-209ENST00000527013 ZNF335Q9H4Z2 1342 aaPredicted RBP25.74■■□□□ 1.71
CHEK1-209ENST00000527013 KIF3BO15066 747 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms