RNA–Protein interactions for RNA: ENST00000527013.5

CHEK1-209, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-209ENST00000527013 NISCHQ9Y2I1 1504 aa40.7■■■■■ 4.11
CHEK1-209ENST00000527013 ABCC9O60706 1549 aa36.61■■■■□ 3.45
CHEK1-209ENST00000527013 CCDC180Q9P1Z9 1646 aa36.59■■■■□ 3.45
CHEK1-209ENST00000527013 RB1CC1Q8TDY2 1594 aa34.87■■■■□ 3.17
CHEK1-209ENST00000527013 NACADO15069 1562 aa34.62■■■■□ 3.13
CHEK1-209ENST00000527013 DNAJC5BQ9UF47 199 aa34.48■■■■□ 3.11
CHEK1-209ENST00000527013 DCAF8L2P0C7V8 631 aa34.25■■■■□ 3.07
CHEK1-209ENST00000527013 MYO15BQ96JP2 1530 aa34.19■■■■□ 3.06
CHEK1-209ENST00000527013 UNC13AQ9UPW8 1703 aa34.06■■■■□ 3.04
CHEK1-209ENST00000527013 PABPN1Q86U42 306 aaKnown RBP eCLIP34.04■■■■□ 3.04
CHEK1-209ENST00000527013 BICRAQ9NZM4 1560 aa33.86■■■■□ 3.01
CHEK1-209ENST00000527013 ZCCHC6Q5VYS8 1495 aaKnown RBP33.71■■■□□ 2.99
CHEK1-209ENST00000527013 DCAF1Q9Y4B6 1507 aa33.69■■■□□ 2.98
CHEK1-209ENST00000527013 SHROOM4Q9ULL8 1493 aa33.47■■■□□ 2.95
CHEK1-209ENST00000527013 SCRIBQ14160 1630 aa33.24■■■□□ 2.91
CHEK1-209ENST00000527013 CC2D2AQ9P2K1 1620 aa33.11■■■□□ 2.89
CHEK1-209ENST00000527013 EIF4G1Q04637 1599 aaKnown RBP33.03■■■□□ 2.88
CHEK1-209ENST00000527013 CECR2Q9BXF3 1484 aa33.02■■■□□ 2.88
CHEK1-209ENST00000527013 NCAPD3P42695 1498 aa31.98■■■□□ 2.71
CHEK1-209ENST00000527013 ATAD2BQ9ULI0 1458 aa31.83■■■□□ 2.69
CHEK1-209ENST00000527013 DNAJC5Q9H3Z4 198 aa31.79■■■□□ 2.68
CHEK1-209ENST00000527013 SMARCA4P51532 1647 aa31.75■■■□□ 2.67
CHEK1-209ENST00000527013 SMARCA2P51531 1590 aa31.74■■■□□ 2.67
CHEK1-209ENST00000527013 HMGXB3Q12766 1538 aa31.72■■■□□ 2.67
CHEK1-209ENST00000527013 CUX2O14529 1486 aa31.68■■■□□ 2.66
CHEK1-209ENST00000527013 ERCC6Q03468 1493 aa31.61■■■□□ 2.65
CHEK1-209ENST00000527013 BAZ1AQ9NRL2 1556 aaPredicted RBP31.6■■■□□ 2.65
CHEK1-209ENST00000527013 PEG3Q9GZU2 1588 aa31.51■■■□□ 2.64
CHEK1-209ENST00000527013 BAZ1BQ9UIG0 1483 aaKnown RBP31.49■■■□□ 2.63
CHEK1-209ENST00000527013 NESP48681 1621 aa31.43■■■□□ 2.62
CHEK1-209ENST00000527013 MROH2BQ7Z745 1585 aa31.33■■■□□ 2.61
CHEK1-209ENST00000527013 LAMC3Q9Y6N6 1575 aa31.26■■■□□ 2.6
CHEK1-209ENST00000527013 THOC2Q8NI27 1593 aaKnown RBP31.17■■■□□ 2.58
CHEK1-209ENST00000527013 PDS5BQ9NTI5 1447 aa31.07■■■□□ 2.56
CHEK1-209ENST00000527013 KIF21AQ7Z4S6 1674 aa31.03■■■□□ 2.56
CHEK1-209ENST00000527013 CADPSQ9ULU8 1353 aa30.97■■■□□ 2.55
CHEK1-209ENST00000527013 WIZO95785 1651 aa30.93■■■□□ 2.54
CHEK1-209ENST00000527013 MRC2Q9UBG0 1479 aa30.79■■■□□ 2.52
CHEK1-209ENST00000527013 WDR62O43379 1518 aa30.74■■■□□ 2.51
CHEK1-209ENST00000527013 RSF1Q96T23 1441 aaPredicted RBP30.66■■■□□ 2.5
CHEK1-209ENST00000527013 CEP164Q9UPV0 1460 aa30.63■■■□□ 2.49
CHEK1-209ENST00000527013 CFTRP13569 1480 aa30.61■■■□□ 2.49
CHEK1-209ENST00000527013 FANCD2Q9BXW9 1451 aa30.6■■■□□ 2.49
CHEK1-209ENST00000527013 TOP2AP11388 1531 aaKnown RBP30.57■■■□□ 2.48
CHEK1-209ENST00000527013 URB2Q14146 1524 aaKnown RBP30.36■■■□□ 2.45
CHEK1-209ENST00000527013 PRDM2Q13029 1718 aa30.27■■■□□ 2.44
CHEK1-209ENST00000527013 CCDC88BA6NC98 1476 aa30.21■■■□□ 2.43
CHEK1-209ENST00000527013 TRIM41Q8WV44 630 aa30.21■■■□□ 2.43
CHEK1-209ENST00000527013 OSCARQ8IYS5 282 aa30.18■■■□□ 2.42
CHEK1-209ENST00000527013 IFT140Q96RY7 1462 aa30.05■■■□□ 2.4
CHEK1-209ENST00000527013 TOPBP1Q92547 1522 aa30.01■■■□□ 2.4
CHEK1-209ENST00000527013 ABCC8Q09428 1581 aa29.98■■■□□ 2.39
CHEK1-209ENST00000527013 ZNF608Q9ULD9 1512 aaPredicted RBP29.98■■■□□ 2.39
CHEK1-209ENST00000527013 DNMBPQ6XZF7 1577 aa29.9■■■□□ 2.38
CHEK1-209ENST00000527013 EIF4G3O43432 1585 aaKnown RBP29.81■■■□□ 2.36
CHEK1-209ENST00000527013 RIMBP3CA6NJZ7 1639 aa29.79■■■□□ 2.36
CHEK1-209ENST00000527013 RIMBP3BA6NNM3 1639 aa29.79■■■□□ 2.36
CHEK1-209ENST00000527013 RIMBP3Q9UFD9 1639 aa29.79■■■□□ 2.36
CHEK1-209ENST00000527013 TARBP1Q13395 1621 aaKnown RBP29.78■■■□□ 2.36
CHEK1-209ENST00000527013 ARHGEF11O15085 1522 aa29.7■■■□□ 2.34
CHEK1-209ENST00000527013 POLA1P09884 1462 aaPredicted RBP29.69■■■□□ 2.34
CHEK1-209ENST00000527013 AQRO60306 1485 aaKnown RBP eCLIP29.68■■■□□ 2.345e-8■■■■■ 34.4
CHEK1-209ENST00000527013 CHD1O14646 1710 aa29.6■■■□□ 2.33
CHEK1-209ENST00000527013 RAD54L2Q9Y4B4 1467 aa29.55■■■□□ 2.32
CHEK1-209ENST00000527013 SOGA1O94964 1423 aa29.55■■■□□ 2.32
CHEK1-209ENST00000527013 WDR97A6NE52 1622 aa29.51■■■□□ 2.31
CHEK1-209ENST00000527013 TDRD9Q8NDG6 1382 aaKnown RBP29.49■■■□□ 2.31
CHEK1-209ENST00000527013 FGD5Q6ZNL6 1462 aa29.48■■■□□ 2.31
CHEK1-209ENST00000527013 FBLN2P98095 1184 aa29.45■■■□□ 2.31
CHEK1-209ENST00000527013 CUX1P39880 1505 aa29.45■■■□□ 2.3
CHEK1-209ENST00000527013 CYB5RLQ6IPT4 315 aa29.44■■■□□ 2.3
CHEK1-209ENST00000527013 ARAP1Q96P48 1450 aa29.39■■■□□ 2.3
CHEK1-209ENST00000527013 SNAPC4Q5SXM2 1469 aa29.38■■■□□ 2.29
CHEK1-209ENST00000527013 MAGI1Q96QZ7 1491 aaPredicted RBP29.36■■■□□ 2.29
CHEK1-209ENST00000527013 GRIN2BQ13224 1484 aa29.32■■■□□ 2.28
CHEK1-209ENST00000527013 CLASP1Q7Z460 1538 aa29.31■■■□□ 2.28
CHEK1-209ENST00000527013 CHMP7Q8WUX9 453 aaPredicted RBP29.27■■■□□ 2.28
CHEK1-209ENST00000527013 SYNJ1O43426 1573 aa29.26■■■□□ 2.28
CHEK1-209ENST00000527013 SYNJ2O15056 1496 aa29.24■■■□□ 2.27
CHEK1-209ENST00000527013 GAPVD1Q14C86 1478 aa29.19■■■□□ 2.26
CHEK1-209ENST00000527013 ABCA10Q8WWZ4 1543 aa29.18■■■□□ 2.26
CHEK1-209ENST00000527013 PBRM1Q86U86 1689 aa29.17■■■□□ 2.26
CHEK1-209ENST00000527013 ABCA5Q8WWZ7 1642 aa29.13■■■□□ 2.25
CHEK1-209ENST00000527013 TRHP20396 242 aaPredicted RBP29.12■■■□□ 2.25
CHEK1-209ENST00000527013 SUPT5HO00267 1087 aaKnown RBP29.09■■■□□ 2.25
CHEK1-209ENST00000527013 WRNQ14191 1432 aaPredicted RBP eCLIP29.03■■■□□ 2.24
CHEK1-209ENST00000527013 TOP2BQ02880 1626 aa28.96■■■□□ 2.23
CHEK1-209ENST00000527013 BIVM-ERCC5R4GMW8 1640 aa28.96■■■□□ 2.23
CHEK1-209ENST00000527013 GRIN2AQ12879 1464 aa28.94■■■□□ 2.22
CHEK1-209ENST00000527013 ADAMTS12P58397 1594 aa28.9■■■□□ 2.22
CHEK1-209ENST00000527013 NUP160Q12769 1436 aa28.87■■■□□ 2.21
CHEK1-209ENST00000527013 FHAD1B1AJZ9 1412 aa28.84■■■□□ 2.21
CHEK1-209ENST00000527013 CEP170Q5SW79 1584 aa28.84■■■□□ 2.21
CHEK1-209ENST00000527013 ERICH3Q5RHP9 1530 aa28.81■■■□□ 2.2
CHEK1-209ENST00000527013 ERCC6L2Q5T890 1561 aa28.79■■■□□ 2.2
CHEK1-209ENST00000527013 SHROOM2Q13796 1616 aa28.77■■■□□ 2.2
CHEK1-209ENST00000527013 PRG4Q92954 1404 aaPredicted RBP28.56■■■□□ 2.16
CHEK1-209ENST00000527013 JPH4Q96JJ6 628 aa28.55■■■□□ 2.16
CHEK1-209ENST00000527013 RUSC2Q8N2Y8 1516 aa28.5■■■□□ 2.15
CHEK1-209ENST00000527013 IGF1RP08069 1367 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms