RNA–Protein interactions for RNA: ENST00000526846.1

CHD7-204, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-204ENST00000526846 ADGRL1O94910 1474 aa25.65■■□□□ 1.7
CHD7-204ENST00000526846 ZMYM4Q5VZL5 1548 aa25.64■■□□□ 1.7
CHD7-204ENST00000526846 RAPGEF3O95398 923 aa25.64■■□□□ 1.7
CHD7-204ENST00000526846 MTUS2Q5JR59 1369 aa25.62■■□□□ 1.69
CHD7-204ENST00000526846 MAP3K1Q13233 1512 aa25.6■■□□□ 1.69
CHD7-204ENST00000526846 GPATCH8Q9UKJ3 1502 aaKnown RBP25.6■■□□□ 1.69
CHD7-204ENST00000526846 EFCAB2Q5VUJ9 269 aa25.6■■□□□ 1.69
CHD7-204ENST00000526846 POGZQ7Z3K3 1410 aa25.6■■□□□ 1.69
CHD7-204ENST00000526846 ABCC1P33527 1531 aa25.59■■□□□ 1.69
CHD7-204ENST00000526846 ITSN2Q9NZM3 1697 aa25.59■■□□□ 1.69
CHD7-204ENST00000526846 SCAPERQ9BY12 1400 aa25.59■■□□□ 1.69
CHD7-204ENST00000526846 ARHGEF40Q8TER5 1519 aa25.58■■□□□ 1.69
CHD7-204ENST00000526846 SUPT6HQ7KZ85 1726 aaKnown RBP25.57■■□□□ 1.68
CHD7-204ENST00000526846 SAMD9LQ8IVG5 1584 aa25.56■■□□□ 1.68
CHD7-204ENST00000526846 KDM5CP41229 1560 aa25.55■■□□□ 1.68
CHD7-204ENST00000526846 LRRC9Q6ZRR7 1453 aa25.53■■□□□ 1.68
CHD7-204ENST00000526846 ARHGEF12Q9NZN5 1544 aa25.53■■□□□ 1.68
CHD7-204ENST00000526846 KDM4FA0A1W2PPD8 638 aa25.52■■□□□ 1.68
CHD7-204ENST00000526846 NCOA2Q15596 1464 aa25.5■■□□□ 1.67
CHD7-204ENST00000526846 ZNF518AQ6AHZ1 1483 aa25.5■■□□□ 1.67
CHD7-204ENST00000526846 MAGI2Q86UL8 1455 aa25.5■■□□□ 1.67
CHD7-204ENST00000526846 SIGLEC1Q9BZZ2 1709 aa25.5■■□□□ 1.67
CHD7-204ENST00000526846 ZFYVE16Q7Z3T8 1539 aa25.49■■□□□ 1.67
CHD7-204ENST00000526846 CCNB3Q8WWL7 1395 aa25.49■■□□□ 1.67
CHD7-204ENST00000526846 YEATS2Q9ULM3 1422 aa25.47■■□□□ 1.67
CHD7-204ENST00000526846 HECW2Q9P2P5 1572 aa25.46■■□□□ 1.67
CHD7-204ENST00000526846 SYCP2Q9BX26 1530 aa25.46■■□□□ 1.67
CHD7-204ENST00000526846 TRAPPC8Q9Y2L5 1435 aa25.46■■□□□ 1.67
CHD7-204ENST00000526846 KANK4Q5T7N3 995 aaPredicted RBP25.42■■□□□ 1.66
CHD7-204ENST00000526846 BCORL1Q5H9F3 1711 aa25.42■■□□□ 1.66
CHD7-204ENST00000526846 KIDINS220Q9ULH0 1771 aa25.41■■□□□ 1.66
CHD7-204ENST00000526846 KIAA1107Q9UPP5 1409 aa25.4■■□□□ 1.66
CHD7-204ENST00000526846 ADAMTSL3P82987 1691 aa25.4■■□□□ 1.66
CHD7-204ENST00000526846 AFAP1Q8N556 730 aa25.4■■□□□ 1.66
CHD7-204ENST00000526846 ABCA6Q8N139 1617 aa25.4■■□□□ 1.66
CHD7-204ENST00000526846 PLEKHH2Q8IVE3 1493 aa25.4■■□□□ 1.66
CHD7-204ENST00000526846 MLH3Q9UHC1 1453 aa25.4■■□□□ 1.66
CHD7-204ENST00000526846 DIP2CQ9Y2E4 1556 aa25.39■■□□□ 1.66
CHD7-204ENST00000526846 CFDP1Q9UEE9 299 aaPredicted RBP25.39■■□□□ 1.66
CHD7-204ENST00000526846 ZNF777Q9ULD5 760 aaPredicted RBP25.36■■□□□ 1.65
CHD7-204ENST00000526846 REREQ9P2R6 1566 aa25.35■■□□□ 1.65
CHD7-204ENST00000526846 INO80Q9ULG1 1556 aaPredicted RBP25.35■■□□□ 1.65
CHD7-204ENST00000526846 AEBP2Q6ZN18 517 aaPredicted RBP25.34■■□□□ 1.65
CHD7-204ENST00000526846 ATP10AO60312 1499 aa25.34■■□□□ 1.65
CHD7-204ENST00000526846 MBD5Q9P267 1494 aa25.34■■□□□ 1.65
CHD7-204ENST00000526846 ZNF644Q9H582 1327 aaPredicted RBP25.33■■□□□ 1.64
CHD7-204ENST00000526846 C9orf84Q5VXU9 1444 aa25.32■■□□□ 1.64
CHD7-204ENST00000526846 CAMSAP2Q08AD1 1489 aa25.32■■□□□ 1.64
CHD7-204ENST00000526846 HNRNPMP52272 730 aaKnown RBP eCLIP25.3■■□□□ 1.642e-10■■■■■ 35.5
CHD7-204ENST00000526846 MADDQ8WXG6 1647 aa25.3■■□□□ 1.64
CHD7-204ENST00000526846 ATP7AQ04656 1500 aa25.28■■□□□ 1.64
CHD7-204ENST00000526846 MYOM3Q5VTT5 1437 aa25.28■■□□□ 1.64
CHD7-204ENST00000526846 ARHGEF5Q12774 1597 aa25.27■■□□□ 1.64
CHD7-204ENST00000526846 APLP2Q06481 763 aa25.25■■□□□ 1.63
CHD7-204ENST00000526846 MIA2Q96PC5 1412 aa25.24■■□□□ 1.63
CHD7-204ENST00000526846 FER1L4A9Z1Z3 1794 aa25.22■■□□□ 1.63
CHD7-204ENST00000526846 RIMS1Q86UR5 1692 aaKnown RBP25.22■■□□□ 1.63
CHD7-204ENST00000526846 AGLP35573 1532 aa25.22■■□□□ 1.63
CHD7-204ENST00000526846 ARID4BQ4LE39 1312 aaPredicted RBP25.21■■□□□ 1.63
CHD7-204ENST00000526846 CCDC141Q6ZP82 1450 aa25.21■■□□□ 1.63
CHD7-204ENST00000526846 ADGBQ8N7X0 1667 aa25.2■■□□□ 1.63
CHD7-204ENST00000526846 SPAG9O60271 1321 aaKnown RBP25.2■■□□□ 1.62
CHD7-204ENST00000526846 PLXNC1O60486 1568 aa25.2■■□□□ 1.62
CHD7-204ENST00000526846 PTPN23Q9H3S7 1636 aa25.18■■□□□ 1.62
CHD7-204ENST00000526846 PTPRMP28827 1452 aa25.17■■□□□ 1.62
CHD7-204ENST00000526846 RTEL1-TNFRSF6BF6WH68 1400 aa25.16■■□□□ 1.62
CHD7-204ENST00000526846 MYT1LQ9UL68 1186 aa25.15■■□□□ 1.62
CHD7-204ENST00000526846 MAST1Q9Y2H9 1570 aa25.14■■□□□ 1.62
CHD7-204ENST00000526846 CROCC2H7BZ55 1655 aa25.14■■□□□ 1.62
CHD7-204ENST00000526846 FGD6Q6ZV73 1430 aa25.13■■□□□ 1.61
CHD7-204ENST00000526846 TCOF1Q13428 1488 aaKnown RBP25.13■■□□□ 1.61
CHD7-204ENST00000526846 A2MP01023 1474 aa25.1■■□□□ 1.61
CHD7-204ENST00000526846 RSPH4AQ5TD94 716 aa25.1■■□□□ 1.61
CHD7-204ENST00000526846 DNMT1P26358 1616 aaKnown RBP25.08■■□□□ 1.6
CHD7-204ENST00000526846 MLECQ14165 292 aa25.07■■□□□ 1.6
CHD7-204ENST00000526846 SHANK2Q9UPX8 1470 aa25.02■■□□□ 1.6
CHD7-204ENST00000526846 ABCC5O15440 1437 aa25.01■■□□□ 1.59
CHD7-204ENST00000526846 C3P01024 1663 aa25.01■■□□□ 1.59
CHD7-204ENST00000526846 DHX29Q7Z478 1369 aaKnown RBP25■■□□□ 1.59
CHD7-204ENST00000526846 MROH2AA6NES4 1674 aa25■■□□□ 1.59
CHD7-204ENST00000526846 DAPK1P53355 1430 aa24.98■■□□□ 1.59
CHD7-204ENST00000526846 TSPY4P0CV99 314 aa24.96■■□□□ 1.59
CHD7-204ENST00000526846 TSPY10P0CW01 314 aa24.96■■□□□ 1.59
CHD7-204ENST00000526846 CLTCQ00610 1675 aaKnown RBP24.95■■□□□ 1.58
CHD7-204ENST00000526846 EIF2AK4Q9P2K8 1649 aaKnown RBP24.94■■□□□ 1.58
CHD7-204ENST00000526846 RNF17Q9BXT8 1623 aaKnown RBP24.93■■□□□ 1.58
CHD7-204ENST00000526846 CNTLNQ9NXG0 1405 aa24.91■■□□□ 1.58
CHD7-204ENST00000526846 DUOX2Q9NRD8 1548 aa24.89■■□□□ 1.57
CHD7-204ENST00000526846 SETD1BQ9UPS6 1966 aaKnown RBP24.89■■□□□ 1.57
CHD7-204ENST00000526846 LMTK3Q96Q04 1460 aa24.89■■□□□ 1.57
CHD7-204ENST00000526846 PREX1Q8TCU6 1659 aa24.88■■□□□ 1.57
CHD7-204ENST00000526846 PPARGC1BQ86YN6 1023 aaKnown RBP24.88■■□□□ 1.57
CHD7-204ENST00000526846 FAM135AQ9P2D6 1515 aa24.87■■□□□ 1.57
CHD7-204ENST00000526846 MROH1Q8NDA8 1641 aa24.87■■□□□ 1.57
CHD7-204ENST00000526846 ADGRL2O95490 1459 aa24.86■■□□□ 1.57
CHD7-204ENST00000526846 CEBPAP49715 358 aaPredicted RBP24.85■■□□□ 1.57
CHD7-204ENST00000526846 KIF15Q9NS87 1388 aa24.83■■□□□ 1.57
CHD7-204ENST00000526846 GGT6Q6P531 493 aa24.83■■□□□ 1.57
CHD7-204ENST00000526846 KDM5DQ9BY66 1539 aa24.82■■□□□ 1.56
CHD7-204ENST00000526846 KIF3BO15066 747 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms