RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 TRIM41Q8WV44 630 aa9.74□□□□□ -0.85
COPB1-205ENST00000526527 MS4A4AQ96JQ5 239 aa9.73□□□□□ -0.85
COPB1-205ENST00000526527 ZNF316A6NFI3 1004 aaPredicted RBP9.72□□□□□ -0.85
COPB1-205ENST00000526527 LSM11P83369 360 aaKnown RBP eCLIP9.69□□□□□ -0.86
COPB1-205ENST00000526527 KHSRPQ92945 711 aaKnown RBP eCLIP9.69□□□□□ -0.86
COPB1-205ENST00000526527 PHF8Q9UPP1 1060 aa9.69□□□□□ -0.86
COPB1-205ENST00000526527 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.64□□□□□ -0.87
COPB1-205ENST00000526527 RIOK3O14730 519 aaKnown RBP9.64□□□□□ -0.87
COPB1-205ENST00000526527 ZFP91Q96JP5 570 aaPredicted RBP9.64□□□□□ -0.87
COPB1-205ENST00000526527 PBX2P40425 430 aa9.62□□□□□ -0.87
COPB1-205ENST00000526527 PLA2G2EQ9NZK7 142 aa9.62□□□□□ -0.87
COPB1-205ENST00000526527 VGFO15240 615 aaPredicted RBP9.6□□□□□ -0.87
COPB1-205ENST00000526527 RNF25Q96BH1 459 aaPredicted RBP9.6□□□□□ -0.87
COPB1-205ENST00000526527 POTEEQ6S8J3 1075 aa9.59□□□□□ -0.87
COPB1-205ENST00000526527 HCSTQ9UBK5 93 aa9.59□□□□□ -0.87
COPB1-205ENST00000526527 NUDT7P0C024 238 aa9.58□□□□□ -0.88
COPB1-205ENST00000526527 NLRP6P59044 892 aa9.58□□□□□ -0.88
COPB1-205ENST00000526527 LHX6Q9UPM6 363 aa9.57□□□□□ -0.88
COPB1-205ENST00000526527 AXIN2Q9Y2T1 843 aa9.57□□□□□ -0.88
COPB1-205ENST00000526527 KIF3CO14782 793 aa9.56□□□□□ -0.88
COPB1-205ENST00000526527 FBXO22Q8NEZ5 403 aa9.56□□□□□ -0.88
COPB1-205ENST00000526527 C2orf72A6NCS6 295 aa9.53□□□□□ -0.88
COPB1-205ENST00000526527 SLC34A2O95436 690 aa9.52□□□□□ -0.89
COPB1-205ENST00000526527 PCDHGA4Q9Y5G9 962 aa9.52□□□□□ -0.89
COPB1-205ENST00000526527 ADGRD1Q6QNK2 874 aa9.5□□□□□ -0.89
COPB1-205ENST00000526527 ARHGAP33O14559 1287 aa9.49□□□□□ -0.89
COPB1-205ENST00000526527 MFRPQ9BY79 579 aa9.47□□□□□ -0.89
COPB1-205ENST00000526527 BCL11BQ9C0K0 894 aaPredicted RBP9.47□□□□□ -0.89
COPB1-205ENST00000526527 PSDA5PKW4 1024 aaPredicted RBP9.44□□□□□ -0.9
COPB1-205ENST00000526527 TAOK2Q9UL54 1235 aa9.44□□□□□ -0.9
COPB1-205ENST00000526527 STK24Q9Y6E0 443 aa9.44□□□□□ -0.9
COPB1-205ENST00000526527 TK2O00142 265 aa9.43□□□□□ -0.9
COPB1-205ENST00000526527 HRO43593 1189 aa9.42□□□□□ -0.9
COPB1-205ENST00000526527 TMC2Q8TDI7 906 aa9.41□□□□□ -0.9
COPB1-205ENST00000526527 KDM4FA0A1W2PPD8 638 aa9.4□□□□□ -0.9
COPB1-205ENST00000526527 DMRTA1Q5VZB9 504 aa9.4□□□□□ -0.9
COPB1-205ENST00000526527 PSEN2P49810 448 aa9.37□□□□□ -0.91
COPB1-205ENST00000526527 KCTD12Q96CX2 325 aaKnown RBP9.37□□□□□ -0.91
COPB1-205ENST00000526527 STK25O00506 426 aa9.35□□□□□ -0.91
COPB1-205ENST00000526527 PTCD2Q8WV60 388 aaKnown RBP9.35□□□□□ -0.91
COPB1-205ENST00000526527 STAC3Q96MF2 364 aa9.34□□□□□ -0.91
COPB1-205ENST00000526527 RGS20O76081 388 aa9.32□□□□□ -0.92
COPB1-205ENST00000526527 PPP4R3BQ5MIZ7 849 aa9.3□□□□□ -0.92
COPB1-205ENST00000526527 PPP1R37O75864 691 aa9.29□□□□□ -0.92
COPB1-205ENST00000526527 IFFO2Q5TF58 517 aa9.28□□□□□ -0.92
COPB1-205ENST00000526527 PTPN5P54829 565 aa9.27□□□□□ -0.93
COPB1-205ENST00000526527 TBC1D12O60347 775 aa9.26□□□□□ -0.93
COPB1-205ENST00000526527 FOXK1P85037 733 aa9.26□□□□□ -0.93
COPB1-205ENST00000526527 IRX2Q9BZI1 471 aaPredicted RBP9.26□□□□□ -0.93
COPB1-205ENST00000526527 PLPP6Q8IY26 295 aa9.25□□□□□ -0.93
COPB1-205ENST00000526527 VPS9D1Q9Y2B5 631 aa9.25□□□□□ -0.93
COPB1-205ENST00000526527 KCNK17Q96T54 332 aa9.24□□□□□ -0.93
COPB1-205ENST00000526527 KCNH8Q96L42 1107 aa9.23□□□□□ -0.93
COPB1-205ENST00000526527 ECM2O94769 699 aaPredicted RBP9.21□□□□□ -0.94
COPB1-205ENST00000526527 GPHNQ9NQX3 736 aaPredicted RBP9.21□□□□□ -0.94
COPB1-205ENST00000526527 SLC4A5Q9BY07 1137 aa9.2□□□□□ -0.94
COPB1-205ENST00000526527 A0A0G2JS52 829 aa9.19□□□□□ -0.94
COPB1-205ENST00000526527 BHMG1C9JSJ3 638 aaPredicted RBP9.18□□□□□ -0.94
COPB1-205ENST00000526527 DSG2Q14126 1118 aa9.18□□□□□ -0.94
COPB1-205ENST00000526527 THSD4Q6ZMP0 1018 aa9.18□□□□□ -0.94
COPB1-205ENST00000526527 RGL2O15211 777 aa9.16□□□□□ -0.94
COPB1-205ENST00000526527 GOLGA8CPA6NN73 597 aa9.14□□□□□ -0.95
COPB1-205ENST00000526527 BCL2L12Q9HB09 334 aa9.14□□□□□ -0.95
COPB1-205ENST00000526527 ZNF454Q8N9F8 522 aa9.13□□□□□ -0.95
COPB1-205ENST00000526527 OXER1Q8TDS5 423 aa9.13□□□□□ -0.95
COPB1-205ENST00000526527 WNT2BQ93097 391 aa9.13□□□□□ -0.95
COPB1-205ENST00000526527 MRPL50Q8N5N7 158 aaKnown RBP9.11□□□□□ -0.95
COPB1-205ENST00000526527 ZBED2Q9BTP6 218 aa9.11□□□□□ -0.95
COPB1-205ENST00000526527 PTPREP23469 700 aa9.1□□□□□ -0.95
COPB1-205ENST00000526527 PKD2Q13563 968 aa9.1□□□□□ -0.95
COPB1-205ENST00000526527 FOSBP53539 338 aa9.08□□□□□ -0.96
COPB1-205ENST00000526527 UPF1Q92900 1129 aaKnown RBP eCLIP9.07□□□□□ -0.96
COPB1-205ENST00000526527 ANO8Q9HCE9 1232 aaPredicted RBP9.05□□□□□ -0.96
COPB1-205ENST00000526527 NBPF3Q9H094 633 aa9.04□□□□□ -0.96
COPB1-205ENST00000526527 ITGBL1O95965 494 aaPredicted RBP9.02□□□□□ -0.97
COPB1-205ENST00000526527 Q6ZNB5 142 aa9.02□□□□□ -0.97
COPB1-205ENST00000526527 ZDHHC16Q969W1 377 aa9.01□□□□□ -0.97
COPB1-205ENST00000526527 JPH4Q96JJ6 628 aa9.01□□□□□ -0.97
COPB1-205ENST00000526527 ADAM33Q9BZ11 813 aa9.01□□□□□ -0.97
COPB1-205ENST00000526527 CRISPLD2Q9H0B8 497 aa8.99□□□□□ -0.97
COPB1-205ENST00000526527 PPP1R15BQ5SWA1 713 aa8.98□□□□□ -0.97
COPB1-205ENST00000526527 EVI5O60447 810 aa8.97□□□□□ -0.97
COPB1-205ENST00000526527 HS6ST3Q8IZP7 471 aa8.97□□□□□ -0.97
COPB1-205ENST00000526527 ANKK1Q8NFD2 765 aa8.97□□□□□ -0.97
COPB1-205ENST00000526527 RABGEF1Q9UJ41 708 aa8.96□□□□□ -0.98
COPB1-205ENST00000526527 BCAMP50895 628 aa8.93□□□□□ -0.98
COPB1-205ENST00000526527 SOWAHBA6NEL2 793 aa8.92□□□□□ -0.98
COPB1-205ENST00000526527 PPP1R3GB7ZBB8 358 aa8.92□□□□□ -0.98
COPB1-205ENST00000526527 PDE4AP27815 886 aa8.92□□□□□ -0.98
COPB1-205ENST00000526527 PROX2Q3B8N5 592 aa8.92□□□□□ -0.98
COPB1-205ENST00000526527 NYAP1Q6ZVC0 841 aa8.92□□□□□ -0.98
COPB1-205ENST00000526527 KCNC4Q03721 635 aa8.91□□□□□ -0.98
COPB1-205ENST00000526527 LAPTM4AQ15012 233 aa8.91□□□□□ -0.98
COPB1-205ENST00000526527 LAPTM4BQ86VI4 370 aa8.91□□□□□ -0.98
COPB1-205ENST00000526527 COL9A1P20849 921 aa8.9□□□□□ -0.98
COPB1-205ENST00000526527 NCKAP5LQ9HCH0 1330 aa8.89□□□□□ -0.99
COPB1-205ENST00000526527 MAP3K9P80192 1104 aa8.88□□□□□ -0.99
COPB1-205ENST00000526527 TRAF7Q6Q0C0 670 aa8.88□□□□□ -0.99
COPB1-205ENST00000526527 ZFRQ96KR1 1074 aaKnown RBP8.88□□□□□ -0.99
COPB1-205ENST00000526527 WBP1LQ9NX94 342 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms