RNA–Protein interactions for RNA: ENST00000525902.5

CTNND1-212, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-212ENST00000525902 WDR43Q15061 677 aaKnown RBP eCLIP8.27□□□□□ -1.093e-9■■■□□ 15.6
CTNND1-212ENST00000525902 MS4A1P11836 297 aa8.27□□□□□ -1.09
CTNND1-212ENST00000525902 BAZ1AQ9NRL2 1556 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-212ENST00000525902 DEF6Q9H4E7 631 aa8.26□□□□□ -1.09
CTNND1-212ENST00000525902 ZRSR1Q15695 479 aaKnown RBP8.26□□□□□ -1.09
CTNND1-212ENST00000525902 HSCBQ8IWL3 235 aa8.26□□□□□ -1.09
CTNND1-212ENST00000525902 CFAP44Q96MT7 982 aa8.26□□□□□ -1.09
CTNND1-212ENST00000525902 DNAJC2Q99543 621 aaKnown RBP8.26□□□□□ -1.09
CTNND1-212ENST00000525902 USP8P40818 1118 aa8.25□□□□□ -1.09
CTNND1-212ENST00000525902 PLCD4Q9BRC7 762 aa8.25□□□□□ -1.09
CTNND1-212ENST00000525902 DDX11L8A8MPP1 907 aa8.25□□□□□ -1.09
CTNND1-212ENST00000525902 SKOR2Q2VWA4 1001 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-212ENST00000525902 SYAP1Q96A49 352 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-212ENST00000525902 RDXP35241 583 aaKnown RBP8.24□□□□□ -1.09
CTNND1-212ENST00000525902 FBXO3Q9UK99 471 aa8.24□□□□□ -1.09
CTNND1-212ENST00000525902 HSP90AB1P08238 724 aaKnown RBP8.23□□□□□ -1.09
CTNND1-212ENST00000525902 KLHL34Q8N239 644 aa8.23□□□□□ -1.09
CTNND1-212ENST00000525902 PSMD1Q99460 953 aa8.23□□□□□ -1.09
CTNND1-212ENST00000525902 PLCB2Q00722 1185 aa8.23□□□□□ -1.09
CTNND1-212ENST00000525902 WWC1Q8IX03 1113 aa8.23□□□□□ -1.09
CTNND1-212ENST00000525902 RBM28Q9NW13 759 aaKnown RBP8.23□□□□□ -1.09
CTNND1-212ENST00000525902 HMGN5P82970 282 aaKnown RBP8.23□□□□□ -1.09
CTNND1-212ENST00000525902 PAIP2Q9BPZ3 127 aaKnown RBP8.23□□□□□ -1.09
CTNND1-212ENST00000525902 CALD1Q05682 793 aaKnown RBP8.22□□□□□ -1.09
CTNND1-212ENST00000525902 SLC4A1APQ9BWU0 796 aaKnown RBP8.22□□□□□ -1.09
CTNND1-212ENST00000525902 NUDCQ9Y266 331 aa8.22□□□□□ -1.09
CTNND1-212ENST00000525902 VPS8Q8N3P4 1428 aa8.22□□□□□ -1.09
CTNND1-212ENST00000525902 FTSJ3Q8IY81 847 aaKnown RBP8.22□□□□□ -1.09
CTNND1-212ENST00000525902 BRPF3Q9ULD4 1205 aa8.22□□□□□ -1.09
CTNND1-212ENST00000525902 AEBP1Q8IUX7 1158 aa8.21□□□□□ -1.09
CTNND1-212ENST00000525902 CALCOCO1Q9P1Z2 691 aa8.21□□□□□ -1.09
CTNND1-212ENST00000525902 CCNB3Q8WWL7 1395 aa8.21□□□□□ -1.09
CTNND1-212ENST00000525902 MRE11P49959 708 aa8.21□□□□□ -1.1
CTNND1-212ENST00000525902 GOLGA6L4A6NEF3 574 aa8.21□□□□□ -1.1
CTNND1-212ENST00000525902 TPRNQ4KMQ1 711 aa8.21□□□□□ -1.1
CTNND1-212ENST00000525902 CHMP4BQ9H444 224 aaKnown RBP8.21□□□□□ -1.1
CTNND1-212ENST00000525902 DIAPH3Q9NSV4 1193 aa8.21□□□□□ -1.1
CTNND1-212ENST00000525902 FAM193AP78312 1265 aa8.2□□□□□ -1.1
CTNND1-212ENST00000525902 IPO4Q8TEX9 1081 aaKnown RBP8.2□□□□□ -1.1
CTNND1-212ENST00000525902 CLSTN1O94985 981 aa8.2□□□□□ -1.1
CTNND1-212ENST00000525902 GZF1Q9H116 711 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-212ENST00000525902 PDE3BQ13370 1112 aa8.2□□□□□ -1.1
CTNND1-212ENST00000525902 ISY1Q9ULR0 285 aaKnown RBP8.2□□□□□ -1.1
CTNND1-212ENST00000525902 KIF3AQ9Y496 699 aa8.2□□□□□ -1.1
CTNND1-212ENST00000525902 DRC7Q8IY82 874 aa8.2□□□□□ -1.1
CTNND1-212ENST00000525902 SETD5Q9C0A6 1442 aa8.19□□□□□ -1.1
CTNND1-212ENST00000525902 LETM1O95202 739 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-212ENST00000525902 CASC1Q6TDU7 716 aa8.19□□□□□ -1.1
CTNND1-212ENST00000525902 OS9Q13438 667 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-212ENST00000525902 ZNF622Q969S3 477 aaKnown RBP eCLIP8.18□□□□□ -1.13e-7■□□□□ 10.1
CTNND1-212ENST00000525902 ZBED9Q6R2W3 1325 aa8.18□□□□□ -1.1
CTNND1-212ENST00000525902 CTR9Q6PD62 1173 aa8.17□□□□□ -1.1
CTNND1-212ENST00000525902 PDCL2Q8N4E4 241 aa8.17□□□□□ -1.1
CTNND1-212ENST00000525902 R3HCC1Q9Y3T6 440 aaKnown RBP8.17□□□□□ -1.1
CTNND1-212ENST00000525902 PHF14O94880 888 aa8.17□□□□□ -1.1
CTNND1-212ENST00000525902 PDE4AP27815 886 aa8.17□□□□□ -1.1
CTNND1-212ENST00000525902 ARGLU1Q9NWB6 273 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-212ENST00000525902 CECR2Q9BXF3 1484 aa8.16□□□□□ -1.1
CTNND1-212ENST00000525902 FRAT1Q92837 279 aaPredicted RBP8.15□□□□□ -1.1
CTNND1-212ENST00000525902 GTPBP4Q9BZE4 634 aaKnown RBP8.15□□□□□ -1.1
CTNND1-212ENST00000525902 AAMPQ13685 434 aa8.15□□□□□ -1.1
CTNND1-212ENST00000525902 NOC3LQ8WTT2 800 aaKnown RBP8.15□□□□□ -1.1
CTNND1-212ENST00000525902 RCAN3Q9UKA8 241 aa8.15□□□□□ -1.1
CTNND1-212ENST00000525902 PES1O00541 588 aaKnown RBP8.14□□□□□ -1.11
CTNND1-212ENST00000525902 SMAP1Q8IYB5 467 aaPredicted RBP8.14□□□□□ -1.11
CTNND1-212ENST00000525902 HIRIP3Q9BW71 556 aaPredicted RBP8.14□□□□□ -1.11
CTNND1-212ENST00000525902 PHLDB1Q86UU1 1377 aa8.14□□□□□ -1.11
CTNND1-212ENST00000525902 RGS3P49796 1198 aa8.14□□□□□ -1.11
CTNND1-212ENST00000525902 LMOD3Q0VAK6 560 aa8.14□□□□□ -1.11
CTNND1-212ENST00000525902 MNS1Q8NEH6 495 aa8.14□□□□□ -1.11
CTNND1-212ENST00000525902 GIMAP7Q8NHV1 300 aa8.14□□□□□ -1.11
CTNND1-212ENST00000525902 MROH2BQ7Z745 1585 aa8.14□□□□□ -1.11
CTNND1-212ENST00000525902 FAM161AQ3B820 660 aa8.14□□□□□ -1.11
CTNND1-212ENST00000525902 CDCA8Q53HL2 280 aa8.14□□□□□ -1.11
CTNND1-212ENST00000525902 CHMP4AQ9BY43 222 aa8.14□□□□□ -1.11
CTNND1-212ENST00000525902 DHX57Q6P158 1386 aaKnown RBP8.14□□□□□ -1.11
CTNND1-212ENST00000525902 NFKBIBQ15653 356 aa8.13□□□□□ -1.11
CTNND1-212ENST00000525902 MEX3CQ5U5Q3 659 aaKnown RBP8.13□□□□□ -1.11
CTNND1-212ENST00000525902 KIAA1211Q6ZU35 1233 aa8.13□□□□□ -1.11
CTNND1-212ENST00000525902 ACBD3Q9H3P7 528 aa8.13□□□□□ -1.11
CTNND1-212ENST00000525902 GTF2A1P52655 376 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-212ENST00000525902 KIF27Q86VH2 1401 aa8.13□□□□□ -1.11
CTNND1-212ENST00000525902 P3H3Q8IVL6 736 aa8.13□□□□□ -1.11
CTNND1-212ENST00000525902 AK7Q96M32 723 aa8.13□□□□□ -1.11
CTNND1-212ENST00000525902 CGNQ9P2M7 1197 aaKnown RBP8.13□□□□□ -1.11
CTNND1-212ENST00000525902 CCDC39Q9UFE4 941 aa8.13□□□□□ -1.11
CTNND1-212ENST00000525902 MTUS2Q5JR59 1369 aa8.13□□□□□ -1.11
CTNND1-212ENST00000525902 RALBP1Q15311 655 aa8.12□□□□□ -1.11
CTNND1-212ENST00000525902 CENPQQ7L2Z9 268 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-212ENST00000525902 TIGD1Q96MW7 591 aa8.12□□□□□ -1.11
CTNND1-212ENST00000525902 LEKR1Q6ZMV7 388 aa8.12□□□□□ -1.11
CTNND1-212ENST00000525902 CCDC191Q8NCU4 936 aa8.12□□□□□ -1.11
CTNND1-212ENST00000525902 ROCK2O75116 1388 aaKnown RBP8.12□□□□□ -1.11
CTNND1-212ENST00000525902 SOGA1O94964 1423 aa8.12□□□□□ -1.11
CTNND1-212ENST00000525902 SETSIPP0DME0 302 aa8.12□□□□□ -1.11
CTNND1-212ENST00000525902 TDO2P48775 406 aa8.12□□□□□ -1.11
CTNND1-212ENST00000525902 SLKQ9H2G2 1235 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-212ENST00000525902 CCDC173Q0VFZ6 552 aa8.11□□□□□ -1.11
CTNND1-212ENST00000525902 PPP1R15AO75807 674 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-212ENST00000525902 KIF20AO95235 890 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms