RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 POGZQ7Z3K3 1410 aa15.44■□□□□ 0.06
SF3B2-204ENST00000525207 ATP1B4Q9UN42 357 aaPredicted RBP15.44■□□□□ 0.06
SF3B2-204ENST00000525207 ZFYVE16Q7Z3T8 1539 aa15.43■□□□□ 0.06
SF3B2-204ENST00000525207 CDK11AQ9UQ88 783 aaPredicted RBP15.43■□□□□ 0.06
SF3B2-204ENST00000525207 CDC42BPBQ9Y5S2 1711 aa15.43■□□□□ 0.06
SF3B2-204ENST00000525207 SIGLEC1Q9BZZ2 1709 aa15.42■□□□□ 0.06
SF3B2-204ENST00000525207 ARHGAP5Q13017 1502 aa15.41■□□□□ 0.06
SF3B2-204ENST00000525207 HECW2Q9P2P5 1572 aa15.41■□□□□ 0.06
SF3B2-204ENST00000525207 MAGI2Q86UL8 1455 aa15.4■□□□□ 0.06
SF3B2-204ENST00000525207 MADDQ8WXG6 1647 aa15.4■□□□□ 0.06
SF3B2-204ENST00000525207 KDM5CP41229 1560 aa15.4■□□□□ 0.06
SF3B2-204ENST00000525207 CDC42BPAQ5VT25 1732 aa15.4■□□□□ 0.06
SF3B2-204ENST00000525207 SCAPERQ9BY12 1400 aa15.39■□□□□ 0.05
SF3B2-204ENST00000525207 YEATS2Q9ULM3 1422 aa15.38■□□□□ 0.05
SF3B2-204ENST00000525207 ABCC1P33527 1531 aa15.38■□□□□ 0.05
SF3B2-204ENST00000525207 ITSN2Q9NZM3 1697 aa15.37■□□□□ 0.05
SF3B2-204ENST00000525207 ZNF518AQ6AHZ1 1483 aa15.36■□□□□ 0.05
SF3B2-204ENST00000525207 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
SF3B2-204ENST00000525207 RIMS1Q86UR5 1692 aaKnown RBP15.35■□□□□ 0.05
SF3B2-204ENST00000525207 PTPRMP28827 1452 aa15.35■□□□□ 0.05
SF3B2-204ENST00000525207 CEP162Q5TB80 1403 aa15.34■□□□□ 0.05
SF3B2-204ENST00000525207 EFCAB2Q5VUJ9 269 aa15.34■□□□□ 0.05
SF3B2-204ENST00000525207 FER1L4A9Z1Z3 1794 aa15.32■□□□□ 0.04
SF3B2-204ENST00000525207 DIP2CQ9Y2E4 1556 aa15.32■□□□□ 0.04
SF3B2-204ENST00000525207 C9orf84Q5VXU9 1444 aa15.31■□□□□ 0.04
SF3B2-204ENST00000525207 ABCA6Q8N139 1617 aa15.31■□□□□ 0.04
SF3B2-204ENST00000525207 SAMD9LQ8IVG5 1584 aa15.3■□□□□ 0.04
SF3B2-204ENST00000525207 EHBP1L1Q8N3D4 1523 aa15.3■□□□□ 0.04
SF3B2-204ENST00000525207 REREQ9P2R6 1566 aa15.3■□□□□ 0.04
SF3B2-204ENST00000525207 ARID4BQ4LE39 1312 aaPredicted RBP15.29■□□□□ 0.04
SF3B2-204ENST00000525207 FOXD1Q16676 465 aa15.29■□□□□ 0.04
SF3B2-204ENST00000525207 ARHGEF12Q9NZN5 1544 aa15.28■□□□□ 0.04
SF3B2-204ENST00000525207 ATP10AO60312 1499 aa15.28■□□□□ 0.04
SF3B2-204ENST00000525207 SYCP2Q9BX26 1530 aa15.27■□□□□ 0.03
SF3B2-204ENST00000525207 GPATCH8Q9UKJ3 1502 aaKnown RBP15.27■□□□□ 0.03
SF3B2-204ENST00000525207 MLH3Q9UHC1 1453 aa15.27■□□□□ 0.03
SF3B2-204ENST00000525207 TIAM1Q13009 1591 aa15.26■□□□□ 0.03
SF3B2-204ENST00000525207 KIDINS220Q9ULH0 1771 aa15.26■□□□□ 0.03
SF3B2-204ENST00000525207 TRAPPC8Q9Y2L5 1435 aa15.26■□□□□ 0.03
SF3B2-204ENST00000525207 MTUS2Q5JR59 1369 aa15.24■□□□□ 0.03
SF3B2-204ENST00000525207 LMTK3Q96Q04 1460 aa15.22■□□□□ 0.03
SF3B2-204ENST00000525207 INO80Q9ULG1 1556 aaPredicted RBP15.22■□□□□ 0.03
SF3B2-204ENST00000525207 AFAP1Q8N556 730 aa15.21■□□□□ 0.03
SF3B2-204ENST00000525207 AGLP35573 1532 aa15.21■□□□□ 0.03
SF3B2-204ENST00000525207 SUPT6HQ7KZ85 1726 aaKnown RBP15.2■□□□□ 0.02
SF3B2-204ENST00000525207 PLEKHH2Q8IVE3 1493 aa15.2■□□□□ 0.02
SF3B2-204ENST00000525207 VPS8Q8N3P4 1428 aa15.19■□□□□ 0.02
SF3B2-204ENST00000525207 CCNB3Q8WWL7 1395 aa15.19■□□□□ 0.02
SF3B2-204ENST00000525207 KIAA1107Q9UPP5 1409 aa15.18■□□□□ 0.02
SF3B2-204ENST00000525207 ATP7AQ04656 1500 aa15.18■□□□□ 0.02
SF3B2-204ENST00000525207 PLXNC1O60486 1568 aa15.17■□□□□ 0.02
SF3B2-204ENST00000525207 PREX1Q8TCU6 1659 aa15.16■□□□□ 0.02
SF3B2-204ENST00000525207 MLECQ14165 292 aa15.15■□□□□ 0.02
SF3B2-204ENST00000525207 NCOA2Q15596 1464 aa15.14■□□□□ 0.01
SF3B2-204ENST00000525207 CFDP1Q9UEE9 299 aaPredicted RBP15.14■□□□□ 0.01
SF3B2-204ENST00000525207 C3P01024 1663 aa15.13■□□□□ 0.01
SF3B2-204ENST00000525207 MYT1LQ9UL68 1186 aa15.13■□□□□ 0.01
SF3B2-204ENST00000525207 ZNF777Q9ULD5 760 aaPredicted RBP15.13■□□□□ 0.01
SF3B2-204ENST00000525207 ADGBQ8N7X0 1667 aa15.12■□□□□ 0.01
SF3B2-204ENST00000525207 MBD5Q9P267 1494 aa15.11■□□□□ 0.01
SF3B2-204ENST00000525207 MROH2AA6NES4 1674 aa15.11■□□□□ 0.01
SF3B2-204ENST00000525207 MAP3K1Q13233 1512 aa15.11■□□□□ 0.01
SF3B2-204ENST00000525207 CAMSAP2Q08AD1 1489 aa15.1■□□□□ 0.01
SF3B2-204ENST00000525207 LRRC9Q6ZRR7 1453 aa15.1■□□□□ 0.01
SF3B2-204ENST00000525207 LOC105371045A0A1W2PR82 267 aa15.1■□□□□ 0.01
SF3B2-204ENST00000525207 SPAG9O60271 1321 aaKnown RBP15.09■□□□□ 0.01
SF3B2-204ENST00000525207 HNRNPMP52272 730 aaKnown RBP eCLIP15.08■□□□□ 0
SF3B2-204ENST00000525207 A2MP01023 1474 aa15.08■□□□□ 0
SF3B2-204ENST00000525207 CCDC141Q6ZP82 1450 aa15.08■□□□□ 0
SF3B2-204ENST00000525207 CNTLNQ9NXG0 1405 aa15.07■□□□□ 0
SF3B2-204ENST00000525207 ARHGEF5Q12774 1597 aa15.07■□□□□ 0
SF3B2-204ENST00000525207 ZNF644Q9H582 1327 aaPredicted RBP15.06■□□□□ 0
SF3B2-204ENST00000525207 RTEL1-TNFRSF6BF6WH68 1400 aa15.05■□□□□ -0
SF3B2-204ENST00000525207 SETD1BQ9UPS6 1966 aaKnown RBP15.05■□□□□ -0
SF3B2-204ENST00000525207 CLTCQ00610 1675 aaKnown RBP15.04■□□□□ -0
SF3B2-204ENST00000525207 UHRF1BP1Q6BDS2 1440 aa15.03■□□□□ -0
SF3B2-204ENST00000525207 CEBPAP49715 358 aaPredicted RBP15.02■□□□□ -0
SF3B2-204ENST00000525207 HSPA2P54652 639 aa15.01□□□□□ -0.01
SF3B2-204ENST00000525207 MAST1Q9Y2H9 1570 aa15□□□□□ -0.01
SF3B2-204ENST00000525207 MYOM3Q5VTT5 1437 aa15□□□□□ -0.01
SF3B2-204ENST00000525207 ZNF142P52746 1687 aaPredicted RBP15□□□□□ -0.01
SF3B2-204ENST00000525207 STRCQ7RTU9 1775 aa14.99□□□□□ -0.01
SF3B2-204ENST00000525207 NPATQ14207 1427 aa14.99□□□□□ -0.01
SF3B2-204ENST00000525207 MYO3AQ8NEV4 1616 aa14.99□□□□□ -0.01
SF3B2-204ENST00000525207 FAM135AQ9P2D6 1515 aa14.98□□□□□ -0.01
SF3B2-204ENST00000525207 ESF1Q9H501 851 aaKnown RBP14.98□□□□□ -0.01
SF3B2-204ENST00000525207 CROCC2H7BZ55 1655 aa14.97□□□□□ -0.01
SF3B2-204ENST00000525207 MIA2Q96PC5 1412 aa14.97□□□□□ -0.01
SF3B2-204ENST00000525207 KANK4Q5T7N3 995 aaPredicted RBP14.96□□□□□ -0.01
SF3B2-204ENST00000525207 ILDR1Q86SU0 546 aaPredicted RBP14.96□□□□□ -0.01
SF3B2-204ENST00000525207 KDM5DQ9BY66 1539 aa14.95□□□□□ -0.02
SF3B2-204ENST00000525207 DHX29Q7Z478 1369 aaKnown RBP14.95□□□□□ -0.02
SF3B2-204ENST00000525207 RNF17Q9BXT8 1623 aaKnown RBP14.95□□□□□ -0.02
SF3B2-204ENST00000525207 EIF2AK4Q9P2K8 1649 aaKnown RBP14.94□□□□□ -0.02
SF3B2-204ENST00000525207 ZMYM3Q14202 1370 aa14.94□□□□□ -0.02
SF3B2-204ENST00000525207 PTPN23Q9H3S7 1636 aa14.93□□□□□ -0.02
SF3B2-204ENST00000525207 RSPH4AQ5TD94 716 aa14.93□□□□□ -0.02
SF3B2-204ENST00000525207 PTPRKQ15262 1439 aa14.92□□□□□ -0.02
SF3B2-204ENST00000525207 CEP170BQ9Y4F5 1589 aaPredicted RBP14.92□□□□□ -0.02
SF3B2-204ENST00000525207 ZC3H13Q5T200 1668 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms