RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 CAMSAP2Q08AD1 1489 aa22.22■■□□□ 1.15
BEST1-204ENST00000524926 DNMT1P26358 1616 aaKnown RBP22.21■■□□□ 1.15
BEST1-204ENST00000524926 GCC2Q8IWJ2 1684 aa22.2■■□□□ 1.14
BEST1-204ENST00000524926 ABCC10Q5T3U5 1492 aa22.19■■□□□ 1.14
BEST1-204ENST00000524926 TRIM52Q96A61 297 aa22.18■■□□□ 1.14
BEST1-204ENST00000524926 ABCC2Q92887 1545 aa22.18■■□□□ 1.14
BEST1-204ENST00000524926 ROCK1Q13464 1354 aa22.17■■□□□ 1.14
BEST1-204ENST00000524926 CDC42BPAQ5VT25 1732 aa22.16■■□□□ 1.14
BEST1-204ENST00000524926 KDM6BO15054 1643 aa22.14■■□□□ 1.13
BEST1-204ENST00000524926 TIMELESSQ9UNS1 1208 aa22.1■■□□□ 1.13
BEST1-204ENST00000524926 KCNH8Q96L42 1107 aa22.08■■□□□ 1.13
BEST1-204ENST00000524926 UHRF1BP1LA0JNW5 1464 aa22.06■■□□□ 1.12
BEST1-204ENST00000524926 NCOA1Q15788 1441 aa22.06■■□□□ 1.12
BEST1-204ENST00000524926 OSCARQ8IYS5 282 aa22.06■■□□□ 1.12
BEST1-204ENST00000524926 MPHOSPH9Q99550 1183 aa22.06■■□□□ 1.12
BEST1-204ENST00000524926 ACIN1Q9UKV3 1341 aaKnown RBP22.05■■□□□ 1.12
BEST1-204ENST00000524926 HNRNPMP52272 730 aaKnown RBP eCLIP22.04■■□□□ 1.12
BEST1-204ENST00000524926 ZCCHC11Q5TAX3 1644 aaKnown RBP22.03■■□□□ 1.12
BEST1-204ENST00000524926 CROCC2H7BZ55 1655 aa22.03■■□□□ 1.12
BEST1-204ENST00000524926 ANKRD30AQ9BXX3 1397 aa22.03■■□□□ 1.12
BEST1-204ENST00000524926 TSPY4P0CV99 314 aa22.03■■□□□ 1.12
BEST1-204ENST00000524926 TSPY10P0CW01 314 aa22.03■■□□□ 1.12
BEST1-204ENST00000524926 ADGBQ8N7X0 1667 aa22.02■■□□□ 1.12
BEST1-204ENST00000524926 TONSLQ96HA7 1378 aa22.02■■□□□ 1.12
BEST1-204ENST00000524926 KDM5BQ9UGL1 1544 aa22.02■■□□□ 1.12
BEST1-204ENST00000524926 CDC42BPBQ9Y5S2 1711 aa22.02■■□□□ 1.11
BEST1-204ENST00000524926 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.01■■□□□ 1.11
BEST1-204ENST00000524926 PREX2Q70Z35 1606 aa22.01■■□□□ 1.11
BEST1-204ENST00000524926 ADGRL2O95490 1459 aa22.01■■□□□ 1.11
BEST1-204ENST00000524926 TTC37Q6PGP7 1564 aa22■■□□□ 1.11
BEST1-204ENST00000524926 PPP1R15AO75807 674 aaPredicted RBP21.99■■□□□ 1.11
BEST1-204ENST00000524926 DENND4BO75064 1496 aaPredicted RBP21.99■■□□□ 1.11
BEST1-204ENST00000524926 C9orf84Q5VXU9 1444 aa21.98■■□□□ 1.11
BEST1-204ENST00000524926 ARHGAP5Q13017 1502 aa21.97■■□□□ 1.11
BEST1-204ENST00000524926 SAMD9LQ8IVG5 1584 aa21.97■■□□□ 1.11
BEST1-204ENST00000524926 FOXD1Q16676 465 aa21.96■■□□□ 1.11
BEST1-204ENST00000524926 SHANK2Q9UPX8 1470 aa21.96■■□□□ 1.11
BEST1-204ENST00000524926 SLC4A1APQ9BWU0 796 aaKnown RBP21.96■■□□□ 1.11
BEST1-204ENST00000524926 MBD5Q9P267 1494 aa21.95■■□□□ 1.1
BEST1-204ENST00000524926 RSPH4AQ5TD94 716 aa21.94■■□□□ 1.1
BEST1-204ENST00000524926 ARHGEF5Q12774 1597 aa21.94■■□□□ 1.1
BEST1-204ENST00000524926 MYO5CQ9NQX4 1742 aa21.93■■□□□ 1.1
BEST1-204ENST00000524926 ANKRD50Q9ULJ7 1429 aa21.93■■□□□ 1.1
BEST1-204ENST00000524926 CCDC141Q6ZP82 1450 aa21.92■■□□□ 1.1
BEST1-204ENST00000524926 SYCP2Q9BX26 1530 aa21.89■■□□□ 1.09
BEST1-204ENST00000524926 PLCH2O75038 1416 aa21.88■■□□□ 1.09
BEST1-204ENST00000524926 KIF15Q9NS87 1388 aa21.88■■□□□ 1.09
BEST1-204ENST00000524926 EFCAB2Q5VUJ9 269 aa21.87■■□□□ 1.09
BEST1-204ENST00000524926 PZPP20742 1482 aa21.85■■□□□ 1.09
BEST1-204ENST00000524926 PLEKHH2Q8IVE3 1493 aa21.85■■□□□ 1.09
BEST1-204ENST00000524926 MIER1Q8N108 512 aa21.85■■□□□ 1.09
BEST1-204ENST00000524926 ANKRD30BQ9BXX2 1392 aa21.85■■□□□ 1.09
BEST1-204ENST00000524926 KIAA1107Q9UPP5 1409 aa21.84■■□□□ 1.09
BEST1-204ENST00000524926 WDR7Q9Y4E6 1490 aa21.83■■□□□ 1.09
BEST1-204ENST00000524926 NUP155O75694 1391 aa21.81■■□□□ 1.08
BEST1-204ENST00000524926 NPM1P06748 294 aaKnown RBP eCLIP21.81■■□□□ 1.08
BEST1-204ENST00000524926 PKD2Q13563 968 aa21.8■■□□□ 1.08
BEST1-204ENST00000524926 ARHGEF12Q9NZN5 1544 aa21.79■■□□□ 1.08
BEST1-204ENST00000524926 L3MBTL2Q969R5 705 aa21.77■■□□□ 1.08
BEST1-204ENST00000524926 HIRIP3Q9BW71 556 aaPredicted RBP21.77■■□□□ 1.08
BEST1-204ENST00000524926 ASXL2Q76L83 1435 aa21.77■■□□□ 1.08
BEST1-204ENST00000524926 RPRD2Q5VT52 1461 aaKnown RBP21.77■■□□□ 1.07
BEST1-204ENST00000524926 MAST1Q9Y2H9 1570 aa21.76■■□□□ 1.07
BEST1-204ENST00000524926 ABCC1P33527 1531 aa21.73■■□□□ 1.07
BEST1-204ENST00000524926 ARAP3Q8WWN8 1544 aa21.72■■□□□ 1.07
BEST1-204ENST00000524926 TRAPPC8Q9Y2L5 1435 aa21.71■■□□□ 1.07
BEST1-204ENST00000524926 KDM5DQ9BY66 1539 aa21.69■■□□□ 1.06
BEST1-204ENST00000524926 ABCA9Q8IUA7 1624 aa21.69■■□□□ 1.06
BEST1-204ENST00000524926 AFAP1Q8N556 730 aa21.69■■□□□ 1.06
BEST1-204ENST00000524926 PLXNC1O60486 1568 aa21.68■■□□□ 1.06
BEST1-204ENST00000524926 FANCAO15360 1455 aa21.68■■□□□ 1.06
BEST1-204ENST00000524926 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.67■■□□□ 1.06
BEST1-204ENST00000524926 SPAG9O60271 1321 aaKnown RBP21.66■■□□□ 1.06
BEST1-204ENST00000524926 TEX14Q8IWB6 1497 aa21.65■■□□□ 1.06
BEST1-204ENST00000524926 DDX10Q13206 875 aaKnown RBP21.65■■□□□ 1.06
BEST1-204ENST00000524926 DUOX2Q9NRD8 1548 aa21.65■■□□□ 1.06
BEST1-204ENST00000524926 FAM135AQ9P2D6 1515 aa21.63■■□□□ 1.05
BEST1-204ENST00000524926 YTHDC1Q96MU7 727 aaKnown RBP21.61■■□□□ 1.05
BEST1-204ENST00000524926 NBPF8Q3BBV2 869 aa21.6■■□□□ 1.05
BEST1-204ENST00000524926 MYT1LQ9UL68 1186 aa21.6■■□□□ 1.05
BEST1-204ENST00000524926 ERBINQ96RT1 1412 aa21.6■■□□□ 1.05
BEST1-204ENST00000524926 ADGRL1O94910 1474 aa21.6■■□□□ 1.05
BEST1-204ENST00000524926 SCAPERQ9BY12 1400 aa21.59■■□□□ 1.05
BEST1-204ENST00000524926 RTEL1-TNFRSF6BF6WH68 1400 aa21.59■■□□□ 1.05
BEST1-204ENST00000524926 UNC13BO14795 1591 aa21.59■■□□□ 1.05
BEST1-204ENST00000524926 EIF4G2P78344 907 aaKnown RBP eCLIP21.58■■□□□ 1.04
BEST1-204ENST00000524926 CENPBP07199 599 aaPredicted RBP21.57■■□□□ 1.04
BEST1-204ENST00000524926 HSPA5P11021 654 aaKnown RBP21.57■■□□□ 1.04
BEST1-204ENST00000524926 CYB5RLQ6IPT4 315 aa21.57■■□□□ 1.04
BEST1-204ENST00000524926 ZFYVE16Q7Z3T8 1539 aa21.55■■□□□ 1.04
BEST1-204ENST00000524926 CD109Q6YHK3 1445 aa21.55■■□□□ 1.04
BEST1-204ENST00000524926 ZNF326Q5BKZ1 582 aaKnown RBP21.54■■□□□ 1.04
BEST1-204ENST00000524926 IQGAP3Q86VI3 1631 aa21.51■■□□□ 1.03
BEST1-204ENST00000524926 ATP7AQ04656 1500 aa21.51■■□□□ 1.03
BEST1-204ENST00000524926 MAGI2Q86UL8 1455 aa21.49■■□□□ 1.03
BEST1-204ENST00000524926 CCDC144AA2RUR9 1427 aa21.48■■□□□ 1.03
BEST1-204ENST00000524926 INO80Q9ULG1 1556 aaPredicted RBP21.48■■□□□ 1.03
BEST1-204ENST00000524926 KDM2AQ9Y2K7 1162 aa21.47■■□□□ 1.03
BEST1-204ENST00000524926 DCAF11Q8TEB1 546 aa21.46■■□□□ 1.03
BEST1-204ENST00000524926 KIF3BO15066 747 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms