RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 SCAPERQ9BY12 1400 aa21.19■□□□□ 0.98
SF3B2-203ENST00000524627 MAGI2Q86UL8 1455 aa21.19■□□□□ 0.98
SF3B2-203ENST00000524627 MLECQ14165 292 aa21.17■□□□□ 0.98
SF3B2-203ENST00000524627 FMN1Q68DA7 1419 aa21.16■□□□□ 0.98
SF3B2-203ENST00000524627 HSPA2P54652 639 aa21.16■□□□□ 0.98
SF3B2-203ENST00000524627 ARHGAP35Q9NRY4 1499 aa21.13■□□□□ 0.97
SF3B2-203ENST00000524627 MYO5CQ9NQX4 1742 aa21.12■□□□□ 0.97
SF3B2-203ENST00000524627 FER1L4A9Z1Z3 1794 aa21.12■□□□□ 0.97
SF3B2-203ENST00000524627 EFCAB2Q5VUJ9 269 aa21.11■□□□□ 0.97
SF3B2-203ENST00000524627 CDK11AQ9UQ88 783 aaPredicted RBP21.11■□□□□ 0.97
SF3B2-203ENST00000524627 KIF14Q15058 1648 aa21.11■□□□□ 0.97
SF3B2-203ENST00000524627 ATP10AO60312 1499 aa21.09■□□□□ 0.97
SF3B2-203ENST00000524627 C9orf84Q5VXU9 1444 aa21.08■□□□□ 0.97
SF3B2-203ENST00000524627 TROQ12816 1431 aaPredicted RBP21.06■□□□□ 0.96
SF3B2-203ENST00000524627 ARHGAP5Q13017 1502 aa21.05■□□□□ 0.96
SF3B2-203ENST00000524627 ARHGEF12Q9NZN5 1544 aa21.05■□□□□ 0.96
SF3B2-203ENST00000524627 ZNF518AQ6AHZ1 1483 aa21.04■□□□□ 0.96
SF3B2-203ENST00000524627 CLIP1P30622 1438 aa21.04■□□□□ 0.96
SF3B2-203ENST00000524627 LRRIQ1Q96JM4 1722 aa21.02■□□□□ 0.96
SF3B2-203ENST00000524627 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
SF3B2-203ENST00000524627 AFAP1Q8N556 730 aa21.02■□□□□ 0.96
SF3B2-203ENST00000524627 MYT1LQ9UL68 1186 aa21.01■□□□□ 0.95
SF3B2-203ENST00000524627 CEBPAP49715 358 aaPredicted RBP21■□□□□ 0.95
SF3B2-203ENST00000524627 KDM5CP41229 1560 aa21■□□□□ 0.95
SF3B2-203ENST00000524627 PREX1Q8TCU6 1659 aa20.97■□□□□ 0.95
SF3B2-203ENST00000524627 CDC42BPBQ9Y5S2 1711 aa20.95■□□□□ 0.94
SF3B2-203ENST00000524627 DIP2CQ9Y2E4 1556 aa20.95■□□□□ 0.94
SF3B2-203ENST00000524627 CERKQ8TCT0 537 aa20.94■□□□□ 0.94
SF3B2-203ENST00000524627 PREX2Q70Z35 1606 aa20.92■□□□□ 0.94
SF3B2-203ENST00000524627 ABCA6Q8N139 1617 aa20.92■□□□□ 0.94
SF3B2-203ENST00000524627 CCDC18Q5T9S5 1454 aa20.91■□□□□ 0.94
SF3B2-203ENST00000524627 CASKIN1Q8WXD9 1431 aa20.91■□□□□ 0.94
SF3B2-203ENST00000524627 REREQ9P2R6 1566 aa20.9■□□□□ 0.94
SF3B2-203ENST00000524627 ABCC1P33527 1531 aa20.9■□□□□ 0.94
SF3B2-203ENST00000524627 MLH3Q9UHC1 1453 aa20.9■□□□□ 0.94
SF3B2-203ENST00000524627 TRAPPC8Q9Y2L5 1435 aa20.9■□□□□ 0.94
SF3B2-203ENST00000524627 UHRF1BP1Q6BDS2 1440 aa20.89■□□□□ 0.94
SF3B2-203ENST00000524627 ITSN2Q9NZM3 1697 aa20.88■□□□□ 0.93
SF3B2-203ENST00000524627 STRCQ7RTU9 1775 aa20.85■□□□□ 0.93
SF3B2-203ENST00000524627 SETD1BQ9UPS6 1966 aaKnown RBP20.85■□□□□ 0.93
SF3B2-203ENST00000524627 ESF1Q9H501 851 aaKnown RBP20.85■□□□□ 0.93
SF3B2-203ENST00000524627 C3P01024 1663 aa20.85■□□□□ 0.93
SF3B2-203ENST00000524627 CDC42BPAQ5VT25 1732 aa20.84■□□□□ 0.93
SF3B2-203ENST00000524627 AGLP35573 1532 aa20.84■□□□□ 0.93
SF3B2-203ENST00000524627 DMRT2Q9Y5R5 561 aa20.83■□□□□ 0.93
SF3B2-203ENST00000524627 KIDINS220Q9ULH0 1771 aa20.82■□□□□ 0.92
SF3B2-203ENST00000524627 FYCO1Q9BQS8 1478 aa20.81■□□□□ 0.92
SF3B2-203ENST00000524627 ZNF777Q9ULD5 760 aaPredicted RBP20.81■□□□□ 0.92
SF3B2-203ENST00000524627 SAMD9LQ8IVG5 1584 aa20.78■□□□□ 0.92
SF3B2-203ENST00000524627 SYCP2Q9BX26 1530 aa20.77■□□□□ 0.92
SF3B2-203ENST00000524627 CNTLNQ9NXG0 1405 aa20.76■□□□□ 0.91
SF3B2-203ENST00000524627 GPATCH8Q9UKJ3 1502 aaKnown RBP20.74■□□□□ 0.91
SF3B2-203ENST00000524627 SPAG9O60271 1321 aaKnown RBP20.74■□□□□ 0.91
SF3B2-203ENST00000524627 PTPRTO14522 1441 aa20.73■□□□□ 0.91
SF3B2-203ENST00000524627 HNRNPMP52272 730 aaKnown RBP eCLIP20.73■□□□□ 0.91
SF3B2-203ENST00000524627 SUPT6HQ7KZ85 1726 aaKnown RBP20.7■□□□□ 0.9
SF3B2-203ENST00000524627 CFDP1Q9UEE9 299 aaPredicted RBP20.69■□□□□ 0.9
SF3B2-203ENST00000524627 NCOA1Q15788 1441 aa20.69■□□□□ 0.9
SF3B2-203ENST00000524627 ATP7AQ04656 1500 aa20.68■□□□□ 0.9
SF3B2-203ENST00000524627 MROH2AA6NES4 1674 aa20.68■□□□□ 0.9
SF3B2-203ENST00000524627 ZMYM3Q14202 1370 aa20.68■□□□□ 0.9
SF3B2-203ENST00000524627 CCNB3Q8WWL7 1395 aa20.68■□□□□ 0.9
SF3B2-203ENST00000524627 NPATQ14207 1427 aa20.67■□□□□ 0.9
SF3B2-203ENST00000524627 KIAA1107Q9UPP5 1409 aa20.67■□□□□ 0.9
SF3B2-203ENST00000524627 PLEKHH2Q8IVE3 1493 aa20.67■□□□□ 0.9
SF3B2-203ENST00000524627 CAMSAP1Q5T5Y3 1602 aa20.65■□□□□ 0.9
SF3B2-203ENST00000524627 INO80Q9ULG1 1556 aaPredicted RBP20.65■□□□□ 0.9
SF3B2-203ENST00000524627 MTUS2Q5JR59 1369 aa20.65■□□□□ 0.9
SF3B2-203ENST00000524627 LTBP4Q8N2S1 1624 aa20.64■□□□□ 0.9
SF3B2-203ENST00000524627 PLXNC1O60486 1568 aa20.64■□□□□ 0.9
SF3B2-203ENST00000524627 A2MP01023 1474 aa20.64■□□□□ 0.89
SF3B2-203ENST00000524627 CLTCQ00610 1675 aaKnown RBP20.64■□□□□ 0.89
SF3B2-203ENST00000524627 DISP3Q9P2K9 1392 aa20.62■□□□□ 0.89
SF3B2-203ENST00000524627 GGT6Q6P531 493 aa20.61■□□□□ 0.89
SF3B2-203ENST00000524627 NCKAP5LQ9HCH0 1330 aa20.59■□□□□ 0.89
SF3B2-203ENST00000524627 ZNF644Q9H582 1327 aaPredicted RBP20.58■□□□□ 0.89
SF3B2-203ENST00000524627 MYO3AQ8NEV4 1616 aa20.58■□□□□ 0.89
SF3B2-203ENST00000524627 TIAM1Q13009 1591 aa20.58■□□□□ 0.88
SF3B2-203ENST00000524627 PTPRKQ15262 1439 aa20.57■□□□□ 0.88
SF3B2-203ENST00000524627 ADGBQ8N7X0 1667 aa20.57■□□□□ 0.88
SF3B2-203ENST00000524627 ZNF142P52746 1687 aaPredicted RBP20.56■□□□□ 0.88
SF3B2-203ENST00000524627 IQSEC2Q5JU85 1478 aa20.56■□□□□ 0.88
SF3B2-203ENST00000524627 EHBP1L1Q8N3D4 1523 aa20.55■□□□□ 0.88
SF3B2-203ENST00000524627 ILDR2Q71H61 639 aa20.55■□□□□ 0.88
SF3B2-203ENST00000524627 CEP170BQ9Y4F5 1589 aaPredicted RBP20.55■□□□□ 0.88
SF3B2-203ENST00000524627 MBD5Q9P267 1494 aa20.53■□□□□ 0.88
SF3B2-203ENST00000524627 ZNF335Q9H4Z2 1342 aaPredicted RBP20.53■□□□□ 0.88
SF3B2-203ENST00000524627 PLA2R1Q13018 1463 aa20.52■□□□□ 0.88
SF3B2-203ENST00000524627 PPP6R1Q9UPN7 881 aa20.52■□□□□ 0.88
SF3B2-203ENST00000524627 PKD2Q13563 968 aa20.51■□□□□ 0.87
SF3B2-203ENST00000524627 SPATA31D1Q6ZQQ2 1576 aa20.51■□□□□ 0.87
SF3B2-203ENST00000524627 CEP162Q5TB80 1403 aa20.5■□□□□ 0.87
SF3B2-203ENST00000524627 TCOF1Q13428 1488 aaKnown RBP20.5■□□□□ 0.87
SF3B2-203ENST00000524627 RTEL1-TNFRSF6BF6WH68 1400 aa20.49■□□□□ 0.87
SF3B2-203ENST00000524627 DHX29Q7Z478 1369 aaKnown RBP20.47■□□□□ 0.87
SF3B2-203ENST00000524627 A2ML1A8K2U0 1454 aa20.45■□□□□ 0.86
SF3B2-203ENST00000524627 UBAP1LF5GYI3 381 aa20.45■□□□□ 0.86
SF3B2-203ENST00000524627 CCDC141Q6ZP82 1450 aa20.44■□□□□ 0.86
SF3B2-203ENST00000524627 KIF3BO15066 747 aa20.44■□□□□ 0.86
SF3B2-203ENST00000524627 NCOA2Q15596 1464 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms