RNA–Protein interactions for RNA: ENST00000524579.1

CTNND1-209, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 505 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-209ENST00000524579 CADPS2Q86UW7 1296 aa12.41□□□□□ -0.42
CTNND1-209ENST00000524579 TSHZ2Q9NRE2 1034 aa12.4□□□□□ -0.42
CTNND1-209ENST00000524579 C2orf72A6NCS6 295 aa12.35□□□□□ -0.43
CTNND1-209ENST00000524579 TMC2Q8TDI7 906 aa12.35□□□□□ -0.43
CTNND1-209ENST00000524579 NCKAP5LQ9HCH0 1330 aa12.34□□□□□ -0.43
CTNND1-209ENST00000524579 KIF3CO14782 793 aa12.33□□□□□ -0.44
CTNND1-209ENST00000524579 HAP1P54257 671 aaPredicted RBP12.33□□□□□ -0.44
CTNND1-209ENST00000524579 PDE4AP27815 886 aa12.31□□□□□ -0.44
CTNND1-209ENST00000524579 GPHNQ9NQX3 736 aaPredicted RBP12.31□□□□□ -0.44
CTNND1-209ENST00000524579 CRISPLD2Q9H0B8 497 aa12.3□□□□□ -0.44
CTNND1-209ENST00000524579 LARP6Q9BRS8 491 aaKnown RBP12.29□□□□□ -0.44
CTNND1-209ENST00000524579 DSG2Q14126 1118 aa12.26□□□□□ -0.45
CTNND1-209ENST00000524579 FOXK1P85037 733 aa12.23□□□□□ -0.45
CTNND1-209ENST00000524579 PLPP6Q8IY26 295 aa12.23□□□□□ -0.45
CTNND1-209ENST00000524579 DDX27Q96GQ7 796 aaKnown RBP12.22□□□□□ -0.45
CTNND1-209ENST00000524579 PPP1R15BQ5SWA1 713 aa12.21□□□□□ -0.45
CTNND1-209ENST00000524579 HOXB3P14651 431 aaPredicted RBP12.2□□□□□ -0.46
CTNND1-209ENST00000524579 SNPHO15079 494 aa12.19□□□□□ -0.46
CTNND1-209ENST00000524579 MFSD10Q14728 455 aa12.19□□□□□ -0.46
CTNND1-209ENST00000524579 FAM163AQ96GL9 167 aaPredicted RBP12.19□□□□□ -0.46
CTNND1-209ENST00000524579 WDR70Q9NW82 654 aa12.16□□□□□ -0.46
CTNND1-209ENST00000524579 DOK7Q18PE1 504 aa12.15□□□□□ -0.46
CTNND1-209ENST00000524579 KDM2AQ9Y2K7 1162 aa12.14□□□□□ -0.47
CTNND1-209ENST00000524579 ZNF710Q8N1W2 664 aa12.12□□□□□ -0.47
CTNND1-209ENST00000524579 ST18O60284 1047 aa12.11□□□□□ -0.47
CTNND1-209ENST00000524579 SLC34A2O95436 690 aa12.09□□□□□ -0.47
CTNND1-209ENST00000524579 UPF1Q92900 1129 aaKnown RBP eCLIP12.09□□□□□ -0.47
CTNND1-209ENST00000524579 RIMBP2O15034 1052 aa12.08□□□□□ -0.48
CTNND1-209ENST00000524579 ARSIQ5FYB1 569 aa12.08□□□□□ -0.48
CTNND1-209ENST00000524579 VSIG10Q8N0Z9 540 aa12.08□□□□□ -0.48
CTNND1-209ENST00000524579 LCE2DQ5TA82 110 aaPredicted RBP12.07□□□□□ -0.48
CTNND1-209ENST00000524579 KHSRPQ92945 711 aaKnown RBP eCLIP12.07□□□□□ -0.48
CTNND1-209ENST00000524579 EMILIN3Q9NT22 766 aa12.07□□□□□ -0.48
CTNND1-209ENST00000524579 CAMK2BQ13554 666 aa12.06□□□□□ -0.48
CTNND1-209ENST00000524579 E2F4Q16254 413 aa12.06□□□□□ -0.48
CTNND1-209ENST00000524579 PCDHGA4Q9Y5G9 962 aa12.06□□□□□ -0.48
CTNND1-209ENST00000524579 GPR153Q6NV75 609 aa12.05□□□□□ -0.48
CTNND1-209ENST00000524579 OXER1Q8TDS5 423 aa12.05□□□□□ -0.48
CTNND1-209ENST00000524579 PTCD2Q8WV60 388 aaKnown RBP12.05□□□□□ -0.48
CTNND1-209ENST00000524579 ZSWIM6Q9HCJ5 1215 aa12.04□□□□□ -0.48
CTNND1-209ENST00000524579 MARVELD3Q96A59 401 aa12.02□□□□□ -0.49
CTNND1-209ENST00000524579 TBC1D12O60347 775 aa12.01□□□□□ -0.49
CTNND1-209ENST00000524579 HOXB1P14653 301 aaPredicted RBP12.01□□□□□ -0.49
CTNND1-209ENST00000524579 MAP3K9P80192 1104 aa12□□□□□ -0.49
CTNND1-209ENST00000524579 DPYSL4O14531 572 aa11.99□□□□□ -0.49
CTNND1-209ENST00000524579 NUDT7P0C024 238 aa11.99□□□□□ -0.49
CTNND1-209ENST00000524579 SLC24A1O60721 1099 aa11.98□□□□□ -0.49
CTNND1-209ENST00000524579 KCNV2Q8TDN2 545 aa11.97□□□□□ -0.49
CTNND1-209ENST00000524579 EMP3P54852 163 aa11.95□□□□□ -0.5
CTNND1-209ENST00000524579 KDM4FA0A1W2PPD8 638 aa11.93□□□□□ -0.5
CTNND1-209ENST00000524579 EVI5O60447 810 aa11.93□□□□□ -0.5
CTNND1-209ENST00000524579 FAM205CA6NFA0 338 aa11.9□□□□□ -0.5
CTNND1-209ENST00000524579 P3H3Q8IVL6 736 aa11.9□□□□□ -0.5
CTNND1-209ENST00000524579 LHX6Q9UPM6 363 aa11.9□□□□□ -0.5
CTNND1-209ENST00000524579 ARIH1Q9Y4X5 557 aaPredicted RBP11.9□□□□□ -0.5
CTNND1-209ENST00000524579 ERBB3P21860 1342 aa11.89□□□□□ -0.51
CTNND1-209ENST00000524579 POTEGQ6S5H5 508 aa11.89□□□□□ -0.51
CTNND1-209ENST00000524579 ARHGEF1Q92888 912 aaKnown RBP11.89□□□□□ -0.51
CTNND1-209ENST00000524579 ZNF316A6NFI3 1004 aaPredicted RBP11.88□□□□□ -0.51
CTNND1-209ENST00000524579 POTEMA6NI47 508 aa11.87□□□□□ -0.51
CTNND1-209ENST00000524579 ANO8Q9HCE9 1232 aaPredicted RBP11.87□□□□□ -0.51
CTNND1-209ENST00000524579 POTEB3A0JP26 581 aa11.86□□□□□ -0.51
CTNND1-209ENST00000524579 VARS2Q5ST30 1063 aaKnown RBP11.86□□□□□ -0.51
CTNND1-209ENST00000524579 POTEBQ6S5H4 581 aa11.86□□□□□ -0.51
CTNND1-209ENST00000524579 PDIA6Q15084 440 aa11.84□□□□□ -0.51
CTNND1-209ENST00000524579 HS3ST6Q96QI5 342 aa11.84□□□□□ -0.51
CTNND1-209ENST00000524579 SPDYE16A6NNV3 312 aaPredicted RBP11.83□□□□□ -0.52
CTNND1-209ENST00000524579 DDX12PQ92771 950 aa11.8□□□□□ -0.52
CTNND1-209ENST00000524579 ZNF454Q8N9F8 522 aa11.79□□□□□ -0.52
CTNND1-209ENST00000524579 SEMA3EO15041 775 aa11.77□□□□□ -0.53
CTNND1-209ENST00000524579 PTGER2P43116 358 aa11.77□□□□□ -0.53
CTNND1-209ENST00000524579 FOSBP53539 338 aa11.77□□□□□ -0.53
CTNND1-209ENST00000524579 GRXCR2A6NFK2 248 aa11.76□□□□□ -0.53
CTNND1-209ENST00000524579 PSDA5PKW4 1024 aaPredicted RBP11.75□□□□□ -0.53
CTNND1-209ENST00000524579 JPH4Q96JJ6 628 aa11.75□□□□□ -0.53
CTNND1-209ENST00000524579 PCDHGA10Q9Y5H3 936 aa11.75□□□□□ -0.53
CTNND1-209ENST00000524579 MLLT3P42568 568 aaPredicted RBP11.74□□□□□ -0.53
CTNND1-209ENST00000524579 PPP4R3BQ5MIZ7 849 aa11.74□□□□□ -0.53
CTNND1-209ENST00000524579 PHF14O94880 888 aa11.73□□□□□ -0.53
CTNND1-209ENST00000524579 ZNF687Q8N1G0 1237 aa11.73□□□□□ -0.53
CTNND1-209ENST00000524579 CDAN1Q8IWY9 1227 aa11.72□□□□□ -0.53
CTNND1-209ENST00000524579 ZDHHC16Q969W1 377 aa11.71□□□□□ -0.53
CTNND1-209ENST00000524579 NBR1Q14596 966 aa11.7□□□□□ -0.54
CTNND1-209ENST00000524579 TYW1BQ6NUM6 668 aa11.69□□□□□ -0.54
CTNND1-209ENST00000524579 RBM33Q96EV2 1170 aaKnown RBP11.69□□□□□ -0.54
CTNND1-209ENST00000524579 ADAM33Q9BZ11 813 aa11.69□□□□□ -0.54
CTNND1-209ENST00000524579 AXIN2Q9Y2T1 843 aa11.69□□□□□ -0.54
CTNND1-209ENST00000524579 POTEEQ6S8J3 1075 aa11.68□□□□□ -0.54
CTNND1-209ENST00000524579 EPAS1Q99814 870 aa11.68□□□□□ -0.54
CTNND1-209ENST00000524579 OSBPP22059 807 aa11.67□□□□□ -0.54
CTNND1-209ENST00000524579 PRIM1P49642 420 aaKnown RBP11.67□□□□□ -0.54
CTNND1-209ENST00000524579 TESPA1A2RU30 521 aaPredicted RBP11.66□□□□□ -0.54
CTNND1-209ENST00000524579 FBXW7Q969H0 707 aa11.66□□□□□ -0.54
CTNND1-209ENST00000524579 BCL2L12Q9HB09 334 aa11.65□□□□□ -0.54
CTNND1-209ENST00000524579 PSEN2P49810 448 aa11.64□□□□□ -0.55
CTNND1-209ENST00000524579 KCNK17Q96T54 332 aa11.64□□□□□ -0.55
CTNND1-209ENST00000524579 ARHGAP33O14559 1287 aa11.63□□□□□ -0.55
CTNND1-209ENST00000524579 KRTAP3-3Q9BYR6 98 aa11.63□□□□□ -0.55
CTNND1-209ENST00000524579 KRTAP3-2Q9BYR7 98 aa11.63□□□□□ -0.55
CTNND1-209ENST00000524579 MAP3K7O43318 606 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms