RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 ARHGAP5Q13017 1502 aa23.85■■□□□ 1.41
SF3B2-202ENST00000524475 SUPT6HQ7KZ85 1726 aaKnown RBP23.84■■□□□ 1.41
SF3B2-202ENST00000524475 GPATCH8Q9UKJ3 1502 aaKnown RBP23.84■■□□□ 1.41
SF3B2-202ENST00000524475 FRMPD1Q5SYB0 1578 aa23.82■■□□□ 1.4
SF3B2-202ENST00000524475 DENND4BO75064 1496 aaPredicted RBP23.82■■□□□ 1.4
SF3B2-202ENST00000524475 RICTORQ6R327 1708 aa23.81■■□□□ 1.4
SF3B2-202ENST00000524475 ADGRL1O94910 1474 aa23.81■■□□□ 1.4
SF3B2-202ENST00000524475 ITSN2Q9NZM3 1697 aa23.79■■□□□ 1.4
SF3B2-202ENST00000524475 CCNB3Q8WWL7 1395 aa23.79■■□□□ 1.4
SF3B2-202ENST00000524475 NCOA2Q15596 1464 aa23.79■■□□□ 1.4
SF3B2-202ENST00000524475 ZMYM4Q5VZL5 1548 aa23.77■■□□□ 1.4
SF3B2-202ENST00000524475 POGZQ7Z3K3 1410 aa23.76■■□□□ 1.39
SF3B2-202ENST00000524475 ABCC1P33527 1531 aa23.76■■□□□ 1.39
SF3B2-202ENST00000524475 APLP2Q06481 763 aa23.76■■□□□ 1.39
SF3B2-202ENST00000524475 SCAPERQ9BY12 1400 aa23.76■■□□□ 1.39
SF3B2-202ENST00000524475 RAPGEF3O95398 923 aa23.74■■□□□ 1.39
SF3B2-202ENST00000524475 KANK4Q5T7N3 995 aaPredicted RBP23.72■■□□□ 1.39
SF3B2-202ENST00000524475 ZNF518AQ6AHZ1 1483 aa23.72■■□□□ 1.39
SF3B2-202ENST00000524475 MAGI2Q86UL8 1455 aa23.72■■□□□ 1.39
SF3B2-202ENST00000524475 SAMD9LQ8IVG5 1584 aa23.72■■□□□ 1.39
SF3B2-202ENST00000524475 PLEKHH2Q8IVE3 1493 aa23.71■■□□□ 1.39
SF3B2-202ENST00000524475 KDM5CP41229 1560 aa23.7■■□□□ 1.38
SF3B2-202ENST00000524475 KIAA1107Q9UPP5 1409 aa23.7■■□□□ 1.38
SF3B2-202ENST00000524475 CFDP1Q9UEE9 299 aaPredicted RBP23.7■■□□□ 1.38
SF3B2-202ENST00000524475 ARHGEF40Q8TER5 1519 aa23.68■■□□□ 1.38
SF3B2-202ENST00000524475 ARHGEF12Q9NZN5 1544 aa23.68■■□□□ 1.38
SF3B2-202ENST00000524475 SYCP2Q9BX26 1530 aa23.64■■□□□ 1.37
SF3B2-202ENST00000524475 MYOM3Q5VTT5 1437 aa23.62■■□□□ 1.37
SF3B2-202ENST00000524475 MIA2Q96PC5 1412 aa23.62■■□□□ 1.37
SF3B2-202ENST00000524475 ZFYVE16Q7Z3T8 1539 aa23.62■■□□□ 1.37
SF3B2-202ENST00000524475 MLH3Q9UHC1 1453 aa23.62■■□□□ 1.37
SF3B2-202ENST00000524475 TRAPPC8Q9Y2L5 1435 aa23.61■■□□□ 1.37
SF3B2-202ENST00000524475 HECW2Q9P2P5 1572 aa23.61■■□□□ 1.37
SF3B2-202ENST00000524475 ZNF777Q9ULD5 760 aaPredicted RBP23.59■■□□□ 1.37
SF3B2-202ENST00000524475 MBD5Q9P267 1494 aa23.58■■□□□ 1.37
SF3B2-202ENST00000524475 AFAP1Q8N556 730 aa23.58■■□□□ 1.37
SF3B2-202ENST00000524475 CAMSAP2Q08AD1 1489 aa23.57■■□□□ 1.36
SF3B2-202ENST00000524475 YEATS2Q9ULM3 1422 aa23.56■■□□□ 1.36
SF3B2-202ENST00000524475 ZNF644Q9H582 1327 aaPredicted RBP23.54■■□□□ 1.36
SF3B2-202ENST00000524475 ARHGEF5Q12774 1597 aa23.53■■□□□ 1.36
SF3B2-202ENST00000524475 REREQ9P2R6 1566 aa23.52■■□□□ 1.36
SF3B2-202ENST00000524475 KIDINS220Q9ULH0 1771 aa23.52■■□□□ 1.36
SF3B2-202ENST00000524475 HNRNPMP52272 730 aaKnown RBP eCLIP23.52■■□□□ 1.36
SF3B2-202ENST00000524475 RSPH4AQ5TD94 716 aa23.52■■□□□ 1.36
SF3B2-202ENST00000524475 INO80Q9ULG1 1556 aaPredicted RBP23.52■■□□□ 1.36
SF3B2-202ENST00000524475 ATP10AO60312 1499 aa23.51■■□□□ 1.35
SF3B2-202ENST00000524475 DIP2CQ9Y2E4 1556 aa23.51■■□□□ 1.35
SF3B2-202ENST00000524475 CCDC141Q6ZP82 1450 aa23.5■■□□□ 1.35
SF3B2-202ENST00000524475 C9orf84Q5VXU9 1444 aa23.5■■□□□ 1.35
SF3B2-202ENST00000524475 ABCA6Q8N139 1617 aa23.49■■□□□ 1.35
SF3B2-202ENST00000524475 FGD6Q6ZV73 1430 aa23.49■■□□□ 1.35
SF3B2-202ENST00000524475 ATP7AQ04656 1500 aa23.48■■□□□ 1.35
SF3B2-202ENST00000524475 SPAG9O60271 1321 aaKnown RBP23.47■■□□□ 1.35
SF3B2-202ENST00000524475 RTEL1-TNFRSF6BF6WH68 1400 aa23.47■■□□□ 1.35
SF3B2-202ENST00000524475 TCOF1Q13428 1488 aaKnown RBP23.47■■□□□ 1.35
SF3B2-202ENST00000524475 PTPN23Q9H3S7 1636 aa23.47■■□□□ 1.35
SF3B2-202ENST00000524475 KDM4FA0A1W2PPD8 638 aa23.44■■□□□ 1.34
SF3B2-202ENST00000524475 BCORL1Q5H9F3 1711 aa23.44■■□□□ 1.34
SF3B2-202ENST00000524475 SIGLEC1Q9BZZ2 1709 aa23.44■■□□□ 1.34
SF3B2-202ENST00000524475 MAST1Q9Y2H9 1570 aa23.42■■□□□ 1.34
SF3B2-202ENST00000524475 AGLP35573 1532 aa23.42■■□□□ 1.34
SF3B2-202ENST00000524475 ADAMTSL3P82987 1691 aa23.41■■□□□ 1.34
SF3B2-202ENST00000524475 ADGBQ8N7X0 1667 aa23.39■■□□□ 1.34
SF3B2-202ENST00000524475 PLXNC1O60486 1568 aa23.39■■□□□ 1.33
SF3B2-202ENST00000524475 MYT1LQ9UL68 1186 aa23.38■■□□□ 1.33
SF3B2-202ENST00000524475 SHANK2Q9UPX8 1470 aa23.37■■□□□ 1.33
SF3B2-202ENST00000524475 DNMT1P26358 1616 aaKnown RBP23.37■■□□□ 1.33
SF3B2-202ENST00000524475 CROCC2H7BZ55 1655 aa23.36■■□□□ 1.33
SF3B2-202ENST00000524475 ARID4BQ4LE39 1312 aaPredicted RBP23.35■■□□□ 1.33
SF3B2-202ENST00000524475 TSPY4P0CV99 314 aa23.35■■□□□ 1.33
SF3B2-202ENST00000524475 TSPY10P0CW01 314 aa23.35■■□□□ 1.33
SF3B2-202ENST00000524475 A2MP01023 1474 aa23.34■■□□□ 1.33
SF3B2-202ENST00000524475 ABCC5O15440 1437 aa23.33■■□□□ 1.32
SF3B2-202ENST00000524475 DAPK1P53355 1430 aa23.32■■□□□ 1.32
SF3B2-202ENST00000524475 MADDQ8WXG6 1647 aa23.3■■□□□ 1.32
SF3B2-202ENST00000524475 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.3■■□□□ 1.32
SF3B2-202ENST00000524475 DHX29Q7Z478 1369 aaKnown RBP23.28■■□□□ 1.32
SF3B2-202ENST00000524475 FER1L4A9Z1Z3 1794 aa23.26■■□□□ 1.31
SF3B2-202ENST00000524475 AEBP2Q6ZN18 517 aaPredicted RBP23.25■■□□□ 1.31
SF3B2-202ENST00000524475 RRBP1Q9P2E9 1410 aaKnown RBP23.25■■□□□ 1.31
SF3B2-202ENST00000524475 PPARGC1BQ86YN6 1023 aaKnown RBP23.23■■□□□ 1.31
SF3B2-202ENST00000524475 ADGRL2O95490 1459 aa23.23■■□□□ 1.31
SF3B2-202ENST00000524475 PTPRMP28827 1452 aa23.23■■□□□ 1.31
SF3B2-202ENST00000524475 RIMS1Q86UR5 1692 aaKnown RBP23.22■■□□□ 1.31
SF3B2-202ENST00000524475 DUOX2Q9NRD8 1548 aa23.21■■□□□ 1.31
SF3B2-202ENST00000524475 EIF2AK4Q9P2K8 1649 aaKnown RBP23.21■■□□□ 1.31
SF3B2-202ENST00000524475 FAM50AQ14320 339 aaKnown RBP23.2■■□□□ 1.3
SF3B2-202ENST00000524475 FAM135AQ9P2D6 1515 aa23.19■■□□□ 1.3
SF3B2-202ENST00000524475 MLECQ14165 292 aa23.18■■□□□ 1.3
SF3B2-202ENST00000524475 PPP6R1Q9UPN7 881 aa23.18■■□□□ 1.3
SF3B2-202ENST00000524475 NCOA1Q15788 1441 aa23.17■■□□□ 1.3
SF3B2-202ENST00000524475 CNTLNQ9NXG0 1405 aa23.17■■□□□ 1.3
SF3B2-202ENST00000524475 ANKRD30AQ9BXX3 1397 aa23.17■■□□□ 1.3
SF3B2-202ENST00000524475 KIF15Q9NS87 1388 aa23.16■■□□□ 1.3
SF3B2-202ENST00000524475 ERBINQ96RT1 1412 aa23.16■■□□□ 1.3
SF3B2-202ENST00000524475 RNF17Q9BXT8 1623 aaKnown RBP23.15■■□□□ 1.3
SF3B2-202ENST00000524475 MROH2AA6NES4 1674 aa23.15■■□□□ 1.3
SF3B2-202ENST00000524475 ROCK1Q13464 1354 aa23.13■■□□□ 1.29
SF3B2-202ENST00000524475 PTPRKQ15262 1439 aa23.12■■□□□ 1.29
SF3B2-202ENST00000524475 KIF3BO15066 747 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms