RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 SHANK2Q9UPX8 1470 aa7.86□□□□□ -1.15
CLINT1-208ENST00000524306 PREX2Q70Z35 1606 aa7.86□□□□□ -1.15
CLINT1-208ENST00000524306 CHMP7Q8WUX9 453 aaPredicted RBP7.85□□□□□ -1.15
CLINT1-208ENST00000524306 CDC42BPAQ5VT25 1732 aa7.85□□□□□ -1.15
CLINT1-208ENST00000524306 PPP1R15AO75807 674 aaPredicted RBP7.85□□□□□ -1.15
CLINT1-208ENST00000524306 ABCC10Q5T3U5 1492 aa7.85□□□□□ -1.15
CLINT1-208ENST00000524306 MAST1Q9Y2H9 1570 aa7.85□□□□□ -1.15
CLINT1-208ENST00000524306 ADGRL2O95490 1459 aa7.84□□□□□ -1.15
CLINT1-208ENST00000524306 GTF3C3Q9Y5Q9 886 aa7.83□□□□□ -1.16
CLINT1-208ENST00000524306 CDK13Q14004 1512 aaKnown RBP7.83□□□□□ -1.16
CLINT1-208ENST00000524306 PRG4Q92954 1404 aaPredicted RBP7.83□□□□□ -1.16
CLINT1-208ENST00000524306 ITGAEP38570 1179 aa7.82□□□□□ -1.16
CLINT1-208ENST00000524306 JPH4Q96JJ6 628 aa7.82□□□□□ -1.16
CLINT1-208ENST00000524306 ZCCHC11Q5TAX3 1644 aaKnown RBP7.81□□□□□ -1.16
CLINT1-208ENST00000524306 ATP10BO94823 1461 aa7.81□□□□□ -1.16
CLINT1-208ENST00000524306 DENND4BO75064 1496 aaPredicted RBP7.81□□□□□ -1.16
CLINT1-208ENST00000524306 ATP1B4Q9UN42 357 aaPredicted RBP7.81□□□□□ -1.16
CLINT1-208ENST00000524306 MYO5CQ9NQX4 1742 aa7.81□□□□□ -1.16
CLINT1-208ENST00000524306 DAPK1P53355 1430 aa7.8□□□□□ -1.16
CLINT1-208ENST00000524306 PLB1Q6P1J6 1458 aa7.8□□□□□ -1.16
CLINT1-208ENST00000524306 CDK11AQ9UQ88 783 aaPredicted RBP7.8□□□□□ -1.16
CLINT1-208ENST00000524306 CCER2I3L3R5 266 aa7.79□□□□□ -1.16
CLINT1-208ENST00000524306 PLXNC1O60486 1568 aa7.79□□□□□ -1.16
CLINT1-208ENST00000524306 TONSLQ96HA7 1378 aa7.79□□□□□ -1.16
CLINT1-208ENST00000524306 ABCC5O15440 1437 aa7.79□□□□□ -1.16
CLINT1-208ENST00000524306 KDM5DQ9BY66 1539 aa7.79□□□□□ -1.16
CLINT1-208ENST00000524306 CDC42BPBQ9Y5S2 1711 aa7.79□□□□□ -1.16
CLINT1-208ENST00000524306 PTPRGP23470 1445 aa7.78□□□□□ -1.16
CLINT1-208ENST00000524306 PLEKHH2Q8IVE3 1493 aa7.78□□□□□ -1.16
CLINT1-208ENST00000524306 GPATCH8Q9UKJ3 1502 aaKnown RBP7.78□□□□□ -1.16
CLINT1-208ENST00000524306 ABCA9Q8IUA7 1624 aa7.78□□□□□ -1.16
CLINT1-208ENST00000524306 WDR7Q9Y4E6 1490 aa7.78□□□□□ -1.16
CLINT1-208ENST00000524306 SIN3AQ96ST3 1273 aa7.78□□□□□ -1.16
CLINT1-208ENST00000524306 CFAP74Q9C0B2 1584 aa7.77□□□□□ -1.16
CLINT1-208ENST00000524306 KIAA1107Q9UPP5 1409 aa7.76□□□□□ -1.17
CLINT1-208ENST00000524306 CAMSAP2Q08AD1 1489 aa7.76□□□□□ -1.17
CLINT1-208ENST00000524306 RPRD2Q5VT52 1461 aaKnown RBP7.76□□□□□ -1.17
CLINT1-208ENST00000524306 KDM6BO15054 1643 aa7.75□□□□□ -1.17
CLINT1-208ENST00000524306 ERCC6L2Q5T890 1561 aa7.75□□□□□ -1.17
CLINT1-208ENST00000524306 ANKRD30BQ9BXX2 1392 aa7.74□□□□□ -1.17
CLINT1-208ENST00000524306 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.74□□□□□ -1.17
CLINT1-208ENST00000524306 BCORL1Q5H9F3 1711 aa7.74□□□□□ -1.17
CLINT1-208ENST00000524306 SAMD9LQ8IVG5 1584 aa7.73□□□□□ -1.17
CLINT1-208ENST00000524306 TEX14Q8IWB6 1497 aa7.73□□□□□ -1.17
CLINT1-208ENST00000524306 TTC37Q6PGP7 1564 aa7.73□□□□□ -1.17
CLINT1-208ENST00000524306 NCOA1Q15788 1441 aa7.73□□□□□ -1.17
CLINT1-208ENST00000524306 PPP6R1Q9UPN7 881 aa7.73□□□□□ -1.17
CLINT1-208ENST00000524306 POLR1AO95602 1720 aaPredicted RBP7.73□□□□□ -1.17
CLINT1-208ENST00000524306 UNC13BO14795 1591 aa7.72□□□□□ -1.17
CLINT1-208ENST00000524306 PLPPR3Q6T4P5 718 aa7.72□□□□□ -1.17
CLINT1-208ENST00000524306 MPHOSPH9Q99550 1183 aa7.72□□□□□ -1.17
CLINT1-208ENST00000524306 MBD5Q9P267 1494 aa7.72□□□□□ -1.17
CLINT1-208ENST00000524306 ABCC1P33527 1531 aa7.72□□□□□ -1.17
CLINT1-208ENST00000524306 GLI2P10070 1586 aa7.71□□□□□ -1.17
CLINT1-208ENST00000524306 PZPP20742 1482 aa7.71□□□□□ -1.17
CLINT1-208ENST00000524306 MAGI2Q86UL8 1455 aa7.71□□□□□ -1.17
CLINT1-208ENST00000524306 EIF2AK4Q9P2K8 1649 aaKnown RBP7.71□□□□□ -1.17
CLINT1-208ENST00000524306 RSPH4AQ5TD94 716 aa7.71□□□□□ -1.18
CLINT1-208ENST00000524306 YTHDC1Q96MU7 727 aaKnown RBP7.7□□□□□ -1.18
CLINT1-208ENST00000524306 CCDC141Q6ZP82 1450 aa7.7□□□□□ -1.18
CLINT1-208ENST00000524306 ANKRD30AQ9BXX3 1397 aa7.7□□□□□ -1.18
CLINT1-208ENST00000524306 ADRA2BP18089 450 aa7.69□□□□□ -1.18
CLINT1-208ENST00000524306 NEURL4Q96JN8 1562 aa7.69□□□□□ -1.18
CLINT1-208ENST00000524306 DEPDC5O75140 1603 aa7.69□□□□□ -1.18
CLINT1-208ENST00000524306 PLCH2O75038 1416 aa7.69□□□□□ -1.18
CLINT1-208ENST00000524306 SPATA31E1Q6ZUB1 1445 aa7.69□□□□□ -1.18
CLINT1-208ENST00000524306 ARHGEF12Q9NZN5 1544 aa7.69□□□□□ -1.18
CLINT1-208ENST00000524306 RRP7BPQ9NSQ0 103 aa7.69□□□□□ -1.18
CLINT1-208ENST00000524306 INO80Q9ULG1 1556 aaPredicted RBP7.69□□□□□ -1.18
CLINT1-208ENST00000524306 RTEL1-TNFRSF6BF6WH68 1400 aa7.69□□□□□ -1.18
CLINT1-208ENST00000524306 UHRF1BP1Q6BDS2 1440 aa7.68□□□□□ -1.18
CLINT1-208ENST00000524306 ANP32CO43423 234 aa7.68□□□□□ -1.18
CLINT1-208ENST00000524306 DDX10Q13206 875 aaKnown RBP7.67□□□□□ -1.18
CLINT1-208ENST00000524306 CFDP1Q9UEE9 299 aaPredicted RBP7.67□□□□□ -1.18
CLINT1-208ENST00000524306 ARID4BQ4LE39 1312 aaPredicted RBP7.67□□□□□ -1.18
CLINT1-208ENST00000524306 IQGAP3Q86VI3 1631 aa7.67□□□□□ -1.18
CLINT1-208ENST00000524306 CNTLNQ9NXG0 1405 aa7.66□□□□□ -1.18
CLINT1-208ENST00000524306 PLEKHD1A6NEE1 506 aa7.66□□□□□ -1.18
CLINT1-208ENST00000524306 EIF4G2P78344 907 aaKnown RBP eCLIP7.66□□□□□ -1.18
CLINT1-208ENST00000524306 MAP3K4Q9Y6R4 1608 aa7.66□□□□□ -1.18
CLINT1-208ENST00000524306 DUOX2Q9NRD8 1548 aa7.66□□□□□ -1.18
CLINT1-208ENST00000524306 ERBINQ96RT1 1412 aa7.66□□□□□ -1.18
CLINT1-208ENST00000524306 ANKRD50Q9ULJ7 1429 aa7.66□□□□□ -1.18
CLINT1-208ENST00000524306 KDM5CP41229 1560 aa7.65□□□□□ -1.18
CLINT1-208ENST00000524306 FAM135AQ9P2D6 1515 aa7.65□□□□□ -1.18
CLINT1-208ENST00000524306 C9orf84Q5VXU9 1444 aa7.65□□□□□ -1.19
CLINT1-208ENST00000524306 TRIM52Q96A61 297 aa7.65□□□□□ -1.19
CLINT1-208ENST00000524306 CHIC2Q9UKJ5 165 aa7.65□□□□□ -1.19
CLINT1-208ENST00000524306 L3MBTL2Q969R5 705 aa7.64□□□□□ -1.19
CLINT1-208ENST00000524306 SUPT16HQ9Y5B9 1047 aaKnown RBP7.64□□□□□ -1.19
CLINT1-208ENST00000524306 ATP10AO60312 1499 aa7.64□□□□□ -1.19
CLINT1-208ENST00000524306 FBLN2P98095 1184 aa7.64□□□□□ -1.19
CLINT1-208ENST00000524306 VWDEQ8N2E2 1590 aa7.64□□□□□ -1.19
CLINT1-208ENST00000524306 CCDC7Q96M83 1385 aa7.64□□□□□ -1.19
CLINT1-208ENST00000524306 ZFYVE16Q7Z3T8 1539 aa7.63□□□□□ -1.19
CLINT1-208ENST00000524306 ZNF644Q9H582 1327 aaPredicted RBP7.63□□□□□ -1.19
CLINT1-208ENST00000524306 HSPA5P11021 654 aaKnown RBP7.63□□□□□ -1.19
CLINT1-208ENST00000524306 RNF17Q9BXT8 1623 aaKnown RBP7.63□□□□□ -1.19
CLINT1-208ENST00000524306 RALGAPBQ86X10 1494 aa7.63□□□□□ -1.19
CLINT1-208ENST00000524306 WASHC2AQ641Q2 1341 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms