RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 NUP153P49790 1475 aaKnown RBP15.77■□□□□ 0.11
SPIDR-222ENST00000524006 PPRC1Q5VV67 1664 aaKnown RBP15.76■□□□□ 0.11
SPIDR-222ENST00000524006 ADGBQ8N7X0 1667 aa15.76■□□□□ 0.11
SPIDR-222ENST00000524006 KDM5BQ9UGL1 1544 aa15.75■□□□□ 0.11
SPIDR-222ENST00000524006 TCOF1Q13428 1488 aaKnown RBP15.75■□□□□ 0.11
SPIDR-222ENST00000524006 KIF14Q15058 1648 aa15.75■□□□□ 0.11
SPIDR-222ENST00000524006 COL17A1Q9UMD9 1497 aaPredicted RBP15.73■□□□□ 0.11
SPIDR-222ENST00000524006 MIA2Q96PC5 1412 aa15.73■□□□□ 0.11
SPIDR-222ENST00000524006 ABCA8O94911 1581 aa15.71■□□□□ 0.11
SPIDR-222ENST00000524006 ARID3CA6NKF2 412 aa15.71■□□□□ 0.11
SPIDR-222ENST00000524006 CROCC2H7BZ55 1655 aa15.7■□□□□ 0.1
SPIDR-222ENST00000524006 DNMT1P26358 1616 aaKnown RBP15.7■□□□□ 0.1
SPIDR-222ENST00000524006 ZNF316A6NFI3 1004 aaPredicted RBP15.7■□□□□ 0.1
SPIDR-222ENST00000524006 ZCCHC11Q5TAX3 1644 aaKnown RBP15.69■□□□□ 0.1
SPIDR-222ENST00000524006 HFM1A2PYH4 1435 aa15.68■□□□□ 0.1
SPIDR-222ENST00000524006 TROQ12816 1431 aaPredicted RBP15.68■□□□□ 0.1
SPIDR-222ENST00000524006 MAP3K4Q9Y6R4 1608 aa15.68■□□□□ 0.1
SPIDR-222ENST00000524006 CDC42BPAQ5VT25 1732 aa15.67■□□□□ 0.1
SPIDR-222ENST00000524006 DIEXFQ68CQ4 756 aaKnown RBP15.66■□□□□ 0.1
SPIDR-222ENST00000524006 AKNAQ7Z591 1439 aa15.66■□□□□ 0.1
SPIDR-222ENST00000524006 ADGRL1O94910 1474 aa15.65■□□□□ 0.1
SPIDR-222ENST00000524006 TEX14Q8IWB6 1497 aa15.65■□□□□ 0.1
SPIDR-222ENST00000524006 WDR7Q9Y4E6 1490 aa15.64■□□□□ 0.09
SPIDR-222ENST00000524006 CAMSAP2Q08AD1 1489 aa15.6■□□□□ 0.09
SPIDR-222ENST00000524006 NAIPQ13075 1403 aa15.6■□□□□ 0.09
SPIDR-222ENST00000524006 ACIN1Q9UKV3 1341 aaKnown RBP15.59■□□□□ 0.09
SPIDR-222ENST00000524006 MYO5CQ9NQX4 1742 aa15.59■□□□□ 0.09
SPIDR-222ENST00000524006 DAPK1P53355 1430 aa15.58■□□□□ 0.08
SPIDR-222ENST00000524006 CD109Q6YHK3 1445 aa15.58■□□□□ 0.08
SPIDR-222ENST00000524006 KCNH8Q96L42 1107 aa15.57■□□□□ 0.08
SPIDR-222ENST00000524006 PREX2Q70Z35 1606 aa15.57■□□□□ 0.08
SPIDR-222ENST00000524006 PTPRKQ15262 1439 aa15.56■□□□□ 0.08
SPIDR-222ENST00000524006 PLEKHD1A6NEE1 506 aa15.54■□□□□ 0.08
SPIDR-222ENST00000524006 ATP10BO94823 1461 aa15.52■□□□□ 0.08
SPIDR-222ENST00000524006 ROCK1Q13464 1354 aa15.52■□□□□ 0.08
SPIDR-222ENST00000524006 TONSLQ96HA7 1378 aa15.52■□□□□ 0.08
SPIDR-222ENST00000524006 ILDR1Q86SU0 546 aaPredicted RBP15.51■□□□□ 0.07
SPIDR-222ENST00000524006 RRP7BPQ9NSQ0 103 aa15.51■□□□□ 0.07
SPIDR-222ENST00000524006 CFDP1Q9UEE9 299 aaPredicted RBP15.51■□□□□ 0.07
SPIDR-222ENST00000524006 CHIC2Q9UKJ5 165 aa15.51■□□□□ 0.07
SPIDR-222ENST00000524006 GPATCH8Q9UKJ3 1502 aaKnown RBP15.51■□□□□ 0.07
SPIDR-222ENST00000524006 CDC42BPBQ9Y5S2 1711 aa15.51■□□□□ 0.07
SPIDR-222ENST00000524006 NEUROD1Q13562 356 aa15.5■□□□□ 0.07
SPIDR-222ENST00000524006 TIMELESSQ9UNS1 1208 aa15.5■□□□□ 0.07
SPIDR-222ENST00000524006 TRIM52Q96A61 297 aa15.49■□□□□ 0.07
SPIDR-222ENST00000524006 ABCC5O15440 1437 aa15.48■□□□□ 0.07
SPIDR-222ENST00000524006 HECW2Q9P2P5 1572 aa15.48■□□□□ 0.07
SPIDR-222ENST00000524006 SHANK2Q9UPX8 1470 aa15.47■□□□□ 0.07
SPIDR-222ENST00000524006 ARHGEF5Q12774 1597 aa15.47■□□□□ 0.07
SPIDR-222ENST00000524006 ZNF777Q9ULD5 760 aaPredicted RBP15.47■□□□□ 0.07
SPIDR-222ENST00000524006 ADGRL2O95490 1459 aa15.45■□□□□ 0.06
SPIDR-222ENST00000524006 TTC37Q6PGP7 1564 aa15.45■□□□□ 0.06
SPIDR-222ENST00000524006 ARHGAP5Q13017 1502 aa15.44■□□□□ 0.06
SPIDR-222ENST00000524006 ARAP3Q8WWN8 1544 aa15.44■□□□□ 0.06
SPIDR-222ENST00000524006 ANKRD30AQ9BXX3 1397 aa15.44■□□□□ 0.06
SPIDR-222ENST00000524006 SAMD9LQ8IVG5 1584 aa15.42■□□□□ 0.06
SPIDR-222ENST00000524006 CENPBP07199 599 aaPredicted RBP15.42■□□□□ 0.06
SPIDR-222ENST00000524006 SIN3AQ96ST3 1273 aa15.41■□□□□ 0.06
SPIDR-222ENST00000524006 ADRA2BP18089 450 aa15.4■□□□□ 0.06
SPIDR-222ENST00000524006 C9orf84Q5VXU9 1444 aa15.4■□□□□ 0.06
SPIDR-222ENST00000524006 ZNF644Q9H582 1327 aaPredicted RBP15.4■□□□□ 0.06
SPIDR-222ENST00000524006 ABCA9Q8IUA7 1624 aa15.39■□□□□ 0.05
SPIDR-222ENST00000524006 PPP6R1Q9UPN7 881 aa15.39■□□□□ 0.05
SPIDR-222ENST00000524006 CCDC141Q6ZP82 1450 aa15.39■□□□□ 0.05
SPIDR-222ENST00000524006 PLEKHH2Q8IVE3 1493 aa15.39■□□□□ 0.05
SPIDR-222ENST00000524006 RAPGEF3O95398 923 aa15.38■□□□□ 0.05
SPIDR-222ENST00000524006 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.38■□□□□ 0.05
SPIDR-222ENST00000524006 SYCP2Q9BX26 1530 aa15.36■□□□□ 0.05
SPIDR-222ENST00000524006 MAST1Q9Y2H9 1570 aa15.36■□□□□ 0.05
SPIDR-222ENST00000524006 NCOA1Q15788 1441 aa15.34■□□□□ 0.05
SPIDR-222ENST00000524006 NEO1Q92859 1461 aa15.34■□□□□ 0.05
SPIDR-222ENST00000524006 PLXNC1O60486 1568 aa15.34■□□□□ 0.05
SPIDR-222ENST00000524006 TSPY4P0CV99 314 aa15.34■□□□□ 0.05
SPIDR-222ENST00000524006 TSPY10P0CW01 314 aa15.34■□□□□ 0.05
SPIDR-222ENST00000524006 MPHOSPH9Q99550 1183 aa15.32■□□□□ 0.04
SPIDR-222ENST00000524006 ANKRD50Q9ULJ7 1429 aa15.32■□□□□ 0.04
SPIDR-222ENST00000524006 FRMPD1Q5SYB0 1578 aa15.32■□□□□ 0.04
SPIDR-222ENST00000524006 PIAS4Q8N2W9 510 aaPredicted RBP15.31■□□□□ 0.04
SPIDR-222ENST00000524006 PTPRMP28827 1452 aa15.31■□□□□ 0.04
SPIDR-222ENST00000524006 POLR1AO95602 1720 aaPredicted RBP15.3■□□□□ 0.04
SPIDR-222ENST00000524006 ADAMTSL3P82987 1691 aa15.3■□□□□ 0.04
SPIDR-222ENST00000524006 SLC4A1APQ9BWU0 796 aaKnown RBP15.3■□□□□ 0.04
SPIDR-222ENST00000524006 KDM5DQ9BY66 1539 aa15.29■□□□□ 0.04
SPIDR-222ENST00000524006 PPP1R15AO75807 674 aaPredicted RBP15.29■□□□□ 0.04
SPIDR-222ENST00000524006 KIF15Q9NS87 1388 aa15.28■□□□□ 0.04
SPIDR-222ENST00000524006 RSPH4AQ5TD94 716 aa15.28■□□□□ 0.04
SPIDR-222ENST00000524006 UNC13BO14795 1591 aa15.28■□□□□ 0.04
SPIDR-222ENST00000524006 ABCC1P33527 1531 aa15.27■□□□□ 0.04
SPIDR-222ENST00000524006 PZPP20742 1482 aa15.27■□□□□ 0.04
SPIDR-222ENST00000524006 MIER1Q8N108 512 aa15.27■□□□□ 0.04
SPIDR-222ENST00000524006 RPRD2Q5VT52 1461 aaKnown RBP15.27■□□□□ 0.03
SPIDR-222ENST00000524006 CFAP74Q9C0B2 1584 aa15.26■□□□□ 0.03
SPIDR-222ENST00000524006 DENND4BO75064 1496 aaPredicted RBP15.26■□□□□ 0.03
SPIDR-222ENST00000524006 KIAA1107Q9UPP5 1409 aa15.26■□□□□ 0.03
SPIDR-222ENST00000524006 ARID4BQ4LE39 1312 aaPredicted RBP15.24■□□□□ 0.03
SPIDR-222ENST00000524006 BCORL1Q5H9F3 1711 aa15.24■□□□□ 0.03
SPIDR-222ENST00000524006 MBD5Q9P267 1494 aa15.24■□□□□ 0.03
SPIDR-222ENST00000524006 YTHDC1Q96MU7 727 aaKnown RBP15.23■□□□□ 0.03
SPIDR-222ENST00000524006 ARHGEF40Q8TER5 1519 aa15.22■□□□□ 0.03
SPIDR-222ENST00000524006 DUOX2Q9NRD8 1548 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms